| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,011,929 | T→A | 100% | intergenic (‑3/+66) | fabA ← / ← ycbZ | beta‑hydroxydecanoyl thioester dehydrase/putative peptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,011,929 | 0 | T | A | 100.0% | 781.7 / ‑6.7 | 236 | intergenic (‑3/+66) | fabA/ycbZ | beta‑hydroxydecanoyl thioester dehydrase/putative peptidase |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base A (112/123); total (112/124) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 240 total aligned reads displayed.
CCACCCGTTTCGGTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTTCTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGATGCTTGCGCGA > CP009273/1011784‑1012074 | ccaccCGTTTCGGTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTactc < 2:317374/149‑1 (MQ=255) caccCGTTTCGGTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTActct < 1:2306585/149‑1 (MQ=255) accCGTTTCGGTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTg > 1:1608533/1‑149 (MQ=255) gTTTCGGTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAg > 1:4023179/1‑149 (MQ=255) tCGGTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCt < 2:1469537/149‑1 (MQ=255) tCGGTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCt < 2:3407382/149‑1 (MQ=255) cGGTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCtt < 2:256798/149‑1 (MQ=255) ggTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCtta > 2:3315741/1‑149 (MQ=255) tCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCttatt > 1:441096/1‑149 (MQ=255) ttttGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGTATTCGCGTTTATCTACCATGTACTCTGTAAGCCttatttta < 2:1741495/149‑1 (MQ=255) ttttGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCttatttta > 1:3963981/1‑149 (MQ=255) ttttGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCttatttta < 2:1307710/149‑1 (MQ=255) gACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGa > 1:3528531/1‑149 (MQ=255) ccACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAg < 1:2070051/149‑1 (MQ=255) ccACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAg > 1:964657/1‑149 (MQ=255) acacGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCa > 1:2783829/1‑149 (MQ=255) ggTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCa > 2:926212/1‑149 (MQ=255) atcatcAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATa < 1:3573289/149‑1 (MQ=255) tcatcaGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAg < 1:3708790/149‑1 (MQ=255) catcaGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGc > 2:2614064/1‑149 (MQ=255) atcaGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGATGGTCTTCTTTTGTATAGGATTCGCTTTTATCTACCCTGTACTCTGTAATCCTTATTTTATTGAAGCACGCAGGATAGCt < 2:3885479/149‑1 (MQ=255) atcaGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCt < 1:379665/149‑1 (MQ=255) caGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTaa > 2:3759362/1‑149 (MQ=255) aGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAac < 1:3656022/149‑1 (MQ=255) aGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAac < 1:2568677/149‑1 (MQ=255) cATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAacac < 2:1284301/149‑1 (MQ=255) aTGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACg > 2:182655/1‑149 (MQ=255) tGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGACGCACGCAGGATAGCTAACACgt > 2:3369370/1‑149 (MQ=255) ttCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACgtgt > 1:3346358/1‑149 (MQ=255) ttCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACgtgt < 2:1916201/149‑1 (MQ=255) gTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGGTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTAGCGTTTATCTACCTTGTACTCTGTAAGCCTGATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGc < 1:3507810/149‑1 (MQ=255) gCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACa < 1:2876806/149‑1 (MQ=255) gCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACa < 1:813744/149‑1 (MQ=255) cAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACaa < 1:668110/149‑1 (MQ=255) cGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGa < 2:2997681/149‑1 (MQ=255) cGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGa < 2:3230732/149‑1 (MQ=255) gggCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGAt < 1:3111699/149‑1 (MQ=255) ggCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATc > 1:3443674/1‑149 (MQ=255) ggCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATc < 1:321288/149‑1 (MQ=255) cTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGt < 1:3167353/149‑1 (MQ=255) tttAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGtt > 2:2301012/1‑149 (MQ=255) tttAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGtt < 1:106150/149‑1 (MQ=255) tttAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGtt < 1:106692/149‑1 (MQ=255) tAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCg > 2:1187879/1‑149 (MQ=255) cgcCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGaa < 2:795503/149‑1 (MQ=255) cgcCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGaa < 2:1032724/149‑1 (MQ=255) cgcCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGaa < 2:125870/149‑1 (MQ=255) ccAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATa > 2:2965181/1‑149 (MQ=255) cAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATaa > 1:2432713/1‑149 (MQ=255) aaaCAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATaaa > 2:577155/1‑149 (MQ=255) aaaCAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATaaa < 2:2448994/149‑1 (MQ=255) aaCAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAAc < 1:1322031/149‑1 (MQ=255) aCAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAAcc > 2:2422065/1‑149 (MQ=255) gTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGt > 1:3374909/1‑149 (MQ=255) gTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGt > 1:2007039/1‑149 (MQ=255) ttCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGtt > 2:3452118/1‑149 (MQ=255) tCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCGACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTc < 1:3625763/149‑1 (MQ=255) ccGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGc < 1:3595957/149‑1 (MQ=255) gACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAAc > 1:3319504/1‑149 (MQ=255) gACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAAc > 1:1965034/1‑149 (MQ=255) gACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAAc < 1:272152/149‑1 (MQ=255) gACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAAc > 2:250458/1‑149 (MQ=255) aCCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACg > 2:766361/1‑149 (MQ=255) ccAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGt > 2:2293910/1‑149 (MQ=255) ccAGAGGCAAGAAGGTCTTCTTTTGGATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGAACGATCAGTTCGGAATAAACCAGTTCAGCCAACGt > 2:826685/1‑149 (MQ=255) agGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATg < 1:926212/149‑1 (MQ=255) agGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATg < 1:554288/149‑1 (MQ=255) agaagGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCAt > 2:28732/1‑149 (MQ=255) gaagGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATg > 2:1595451/1‑149 (MQ=255) gaagGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGAGAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATg < 2:3137420/149‑1 (MQ=255) agGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGa > 2:1982653/1‑149 (MQ=255) tcttTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACgg < 1:1773686/149‑1 (MQ=255) cttTTGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGt < 1:386237/149‑1 (MQ=255) ttttGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTg > 2:2474986/1‑149 (MQ=255) tttGTATAGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGa < 1:755947/149‑1 (MQ=255) tataGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGtc < 1:1865854/149‑1 (MQ=255) tataGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGtc < 2:1389980/149‑1 (MQ=255) ataGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGtcc < 1:2974822/149‑1 (MQ=255) ataGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGtcc < 1:182655/149‑1 (MQ=255) ataGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGtcc < 2:2113968/149‑1 (MQ=255) aGGATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTCATGGCCATGGAAAACGGTGACGtcctt > 2:2030002/1‑149 (MQ=255) ggATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGtccttc > 2:2538565/1‑149 (MQ=255) gATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGtccttcc > 2:2726158/1‑149 (MQ=255) gATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGtccttcc < 1:2526295/149‑1 (MQ=255) gATTCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGtccttcc < 2:224444/149‑1 (MQ=255) ttCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTg > 1:1049755/1‑149 (MQ=255) tCGCGTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGt > 2:910083/1‑149 (MQ=255) cgcgTTTATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGtt < 1:3009221/149‑1 (MQ=255) tttATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGa > 1:1587184/1‑149 (MQ=255) tttATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGa < 2:2653931/149‑1 (MQ=255) ttATCTACCATGTACTCTTTAAGGCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACTCTGAACAAGTCCGATCAGTTCGTAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGAt < 2:3626175/149‑1 (MQ=255) ttATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGAt < 2:3693615/149‑1 (MQ=255) ttATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGAt < 2:3812191/149‑1 (MQ=255) ttAGCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGAt < 2:1646741/149‑1 (MQ=255) tATCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGATg > 2:3975359/1‑149 (MQ=255) tCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGATGCt > 1:1221149/1‑149 (MQ=255) tCTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGATGCt < 2:4023179/149‑1 (MQ=255) cTACCATGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGATGCtt < 1:237633/149‑1 (MQ=255) aTGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGATGCTTGcgcg > 2:3276383/1‑149 (MQ=255) tGTACTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGATGCTTGCGCGa > 2:434075/1‑149 (MQ=255) | CCACCCGTTTCGGTCATTTTGACCACACGGTCCATCATCAGCATGTTCGGTGCTGGCAATTGCGGGCCTTTAGCGCCAAACAGTTCACCGCGACCAGAGGCAAGAAGGTCTTCTTTTGTATAGGATTCGCGTTTATCTACCATGTTCTCTGTAAGCCTTATTTTATTGAAGCACGCAGGATAGCTAACACGTGTACGCTGAACAAGTCCGATCAGTTCGGAATAAACCAGTTCAGCCAACGTAATGGCCATGGAAAACGGTGACGTCCTTCCTGTTGCGATGCTTGCGCGA > CP009273/1011784‑1012074 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |