| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,558,685 | G→T | 100% | R436S (CGC→AGC) | dosP ← | oxygen sensor, c‑di‑GMP phosphodiesterase, heme‑regulated; cold‑ and stationary phase‑induced bioflim regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,558,685 | 0 | G | T | 97.5% | 761.8 / 8.4 | 245 | R436S (CGC→AGC) | dosP | oxygen sensor, c‑di‑GMP phosphodiesterase, heme‑regulated; cold‑ and stationary phase‑induced bioflim regulator |
| Reads supporting (aligned to +/- strand): ref base G (4/2); new base T (127/110); total (133/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.54e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 245 total aligned reads displayed.
AATCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTG > CP009273/1558539‑1558830 | aaTCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTAt < 1:1672638/149‑1 (MQ=255)aaTCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGAGTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACCGAGATACTGATCCGGGTTGAGTTTTTCACGAAAGCTAt > 1:1098067/1‑149 (MQ=255) aTCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTGGAGGCTCACGAGGACAAAAAGCGTACCTTCGATAAGACAGAGATACTGATCCGGGTTTAGTTTTTCACGAAAGCAAtt > 1:1408023/1‑149 (MQ=255) aTCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCGTCGATACGACACAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTAtt > 1:1208180/1‑149 (MQ=255) tCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTg > 2:1239163/1‑149 (MQ=255) cATTATCGGCTTGCTGACCACATTCCGTAGCTCCTCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGa < 1:957157/149‑1 (MQ=255) aTTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGAc > 1:1336220/1‑149 (MQ=255) aTTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGAAAGAGATACTGATCCGGGTTGAGTTTTTCACGAAAGCTATTTAc > 1:3808523/1‑149 (MQ=255) aTTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGAGTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGAc > 1:3462208/1‑149 (MQ=255) ttATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGAcc > 1:3562557/1‑149 (MQ=255) tATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCa > 1:3083175/1‑149 (MQ=255) tCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACt > 1:3007861/1‑149 (MQ=255) tCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGACCACt > 2:1563053/1‑149 (MQ=255) gCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTcc < 2:637911/149‑1 (MQ=255) ttGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGGAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAg > 1:1297704/1‑149 (MQ=255) tGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAAt < 2:3321906/149‑1 (MQ=255) aCCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGc < 1:2077356/149‑1 (MQ=255) aCCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGc > 1:2292977/1‑149 (MQ=255) aCCACATTCCGTAGCCCATCGGCGAGTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGGTTGAGTTTTTAACGAAAGCTATTGAACACTTCCAGCAATGc > 1:1485599/1‑149 (MQ=255) ccACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGcc < 2:835432/149‑1 (MQ=255) ccACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACATTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGcc < 2:2322886/149‑1 (MQ=255) cacaTTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCt < 2:217911/149‑1 (MQ=255) aTTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGAt < 1:1810090/149‑1 (MQ=255) ttCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATc < 1:1079112/149‑1 (MQ=255) ttCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATc > 1:2806473/1‑149 (MQ=255) gTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGcc > 2:2682781/1‑149 (MQ=255) tAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGccc < 1:3496138/149‑1 (MQ=255) gCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCAc < 2:3166656/149‑1 (MQ=255) gCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCAc < 1:4075210/149‑1 (MQ=255) cATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCa < 2:3111586/149‑1 (MQ=255) cATCGGCGAGTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGCGGACCAACTGCGTACCTTCGATACGCCAGAGATACTGATCCGGGTTGAGTTTTTCAAGAAACCTATTGACCACTTCCAGCAATGCCGGCTCGGCCCACGcc > 1:2141787/1‑148 (MQ=255) aTCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCAt < 2:3461371/149‑1 (MQ=255) ggCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGc > 2:3666174/1‑149 (MQ=255) gATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCaa > 2:1833621/1‑149 (MQ=255) aTTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAg < 1:2432197/149‑1 (MQ=255) tttGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAgg > 2:596149/1‑149 (MQ=255) ttGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGc < 2:571587/149‑1 (MQ=255) ttGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGc < 1:2639569/149‑1 (MQ=255) gggTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTa > 1:597992/1‑149 (MQ=255) gggTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTa > 1:1783665/1‑149 (MQ=255) gggTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTa > 1:3584389/1‑149 (MQ=255) gggTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATAAGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTa > 1:3584743/1‑149 (MQ=255) aaTGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaa < 1:2411254/149‑1 (MQ=255) aTGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaat > 1:3780920/1‑149 (MQ=255) tGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaatc < 2:595444/149‑1 (MQ=255) gTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaatca < 2:2958868/149‑1 (MQ=255) gTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaatca > 1:3467803/1‑149 (MQ=255) gTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTatcaatca > 1:2723585/1‑149 (MQ=255) cTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAATCTATTGACCACTTCCAGCAATTCCTGATCGGCCCACGCATAGCCAAGGCTATCAATAACATc > 2:847847/1‑149 (MQ=255) cTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATc > 2:2374467/1‑149 (MQ=255) gACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTTACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCt > 1:435656/1‑149 (MQ=255) aCGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTg > 2:3401099/1‑149 (MQ=255) aCGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTg > 2:2900638/1‑149 (MQ=255) gtcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGaa < 1:371362/149‑1 (MQ=255) tcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAat > 2:3188687/1‑149 (MQ=255) tcgtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAat > 2:2771851/1‑149 (MQ=255) gtTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAatat < 2:1651967/149‑1 (MQ=255) gAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCaa > 2:2416616/1‑149 (MQ=255) ggCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAaca > 1:363755/1‑149 (MQ=255) ggCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAaca < 2:398597/149‑1 (MQ=255) cTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACAcc > 2:2609649/1‑149 (MQ=255) aGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATgag > 2:2418353/1‑149 (MQ=255) aGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATgag < 2:2265256/149‑1 (MQ=255) gACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGAt < 1:2681524/149‑1 (MQ=255) cAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATac < 2:1058096/149‑1 (MQ=255) cAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATac < 2:3045929/149‑1 (MQ=255) aaCTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATacac < 2:1366374/149‑1 (MQ=255) cTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATAcacca < 2:2562926/149‑1 (MQ=255) tGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATAcaccac < 1:2974391/149‑1 (MQ=255) gTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACggg > 1:670095/1‑149 (MQ=255) tACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGga > 2:2457592/1‑149 (MQ=255) ccTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGgaga < 1:1749063/149‑1 (MQ=255) gATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACgg > 2:3582724/1‑149 (MQ=255) aTACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGc > 2:2794511/1‑149 (MQ=255) aTACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGc > 2:1114418/1‑149 (MQ=255) aCGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCtt < 1:3352797/149‑1 (MQ=255) aCGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCtt < 2:3072165/149‑1 (MQ=255) aCAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGt < 1:333229/149‑1 (MQ=255) gagaTACTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGa < 1:462147/149‑1 (MQ=255) aCTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAgg > 1:2302614/1‑149 (MQ=255) cTGATCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGt > 2:3845104/1‑149 (MQ=255) aTCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCAt < 2:2093474/149‑1 (MQ=255) tCCGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATc > 1:1538619/1‑149 (MQ=255) cGGTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGa < 2:3471041/149‑1 (MQ=255) gTTTGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAgg > 2:4027936/1‑149 (MQ=255) tGAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTaa < 2:2473217/149‑1 (MQ=255) gAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAAt < 2:780638/149‑1 (MQ=255) gAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAAt < 1:1884702/149‑1 (MQ=255) gAGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAAt > 1:226679/1‑149 (MQ=255) aGTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAAtt < 2:1336220/149‑1 (MQ=255) gTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATtg > 1:3992057/1‑149 (MQ=255) gTTTTTCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATtg > 2:683199/1‑149 (MQ=255) tttCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGc > 2:697032/1‑149 (MQ=255) ttCACGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCa < 1:4107476/149‑1 (MQ=255) cGAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGtt < 1:2114436/149‑1 (MQ=255) gAAAGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTa > 1:1661850/1‑149 (MQ=255) aaaGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTAt < 2:2232763/149‑1 (MQ=255) aaGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTCATTGTGCAGGTTAtt > 2:3176628/1‑149 (MQ=255) aGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTg > 1:1017359/1‑149 (MQ=255) aGCTATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTg > 1:902497/1‑149 (MQ=255) | AATCATTATCGGCTTGCTGACCACATTCCGTAGCTCATCGGCGATTTGGGTAATGTTACTGACGTCGTTTTCGAGGCTCACGAGGACAAACTGCGTACCTTCGATACGACAGAGATACTGATCCGGTTTGAGTTTTTCACGAAAGCGATTGACCACTTCCAGCAATGCCTGATCGGCCCACGCATAGCCAAGGCTATCAATCACATCCTGAATATGGTCAACACCGATGAGATACACCACGGGAGAGACGGCTTTGTCGACCAGGTCATCGAGGTAATTGTGCAGGTTATTG > CP009273/1558539‑1558830 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |