Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,701,282 A→C 10.3% Q36P (CAG→CCG)  rsxC → SoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,701,2820AC10.3% 483.9 / 12.9 241Q36P (CAG→CCG) rsxCSoxR iron‑sulfur cluster reduction factor component; putative membrane‑associated NADH oxidoreductase of electron transport complex
Reads supporting (aligned to +/- strand):  ref base A (122/86);  new base C (30/2);  total (152/89)
Fisher's exact test for biased strand distribution p-value = 4.79e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 244 total aligned reads displayed.

ATCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACC  >  CP009273/1701134‑1701430
                                                                                                                                                    |                                                                                                                                                    
aTCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCa                                                                                                                                                      <  2:3715594/149‑1 (MQ=255)
aTCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCa                                                                                                                                                      <  2:1670860/149‑1 (MQ=255)
    gAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTa                                                                                                                                                  <  1:1557802/149‑1 (MQ=255)
        acCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTAcccc                                                                                                                                              <  1:2369656/149‑1 (MQ=255)
            ttCCCGTGCGTAGCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGgc                                                                                                                                          >  1:515384/1‑149 (MQ=255)
                    cttATCATTCCGGTGTAACACCTTGATTATTTTTTTATGTGAATTCATAAAAAATAAAATCTGGTATTTCAAGGGGGGCATCAATCCACCGGAGATTAAAACCCTGTCCAACGGTACACCCCTGCGCCTGGTACCCGTGGCGCAGCGtt                                                                                                                                  <  1:820563/147‑1 (MQ=255)
                      tATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGtttt                                                                                                                                >  2:3006979/1‑149 (MQ=255)
                       aTCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTg                                                                                                                               >  2:1564863/1‑149 (MQ=255)
                             cccGTGTAACACAATGATTATGTTATTCTCTGAATTCATAAAAAAAAAAATCTGGCATTTAAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTc                                                                                                                         <  1:3221305/149‑1 (MQ=255)
                             cccGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCGGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTc                                                                                                                         <  2:2479455/149‑1 (MQ=255)
                                   gAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCAGGCGCAGCGGTTTGTTATTCCACTGa                                                                                                                   >  1:1816591/1‑149 (MQ=255)
                                    aaCACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCCGCGTTTTGTTATTCCACTGaa                                                                                                                  >  2:2911595/1‑149 (MQ=255)
                                    aaCACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGaa                                                                                                                  >  2:850979/1‑149 (MQ=255)
                                      cacCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCAGCGTGTTGTTATTCCACTGAAAc                                                                                                                >  1:4021094/1‑149 (MQ=255)
                                      cacCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAAc                                                                                                                <  2:1332791/149‑1 (MQ=255)
                                      cacCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACTGAAAc                                                                                                                >  1:4021056/1‑149 (MQ=255)
                                       acaaTGATTAATTTATTCTCTCAATTAATAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGATATTAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACa                                                                                                               <  1:3572205/146‑1 (MQ=255)
                                        ccATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAAAAg                                                                                                              >  1:3203581/1‑149 (MQ=255)
                                        ccATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCCCCAGGTACCCCTGGCGCCGCGTTTTGTTATTCACCTGAAACac                                                                                                              >  2:33710/1‑148 (MQ=255)
                                          aTGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCCGCGGTTTGTTATTACACTGAAACACCa                                                                                                            >  1:3139426/1‑149 (MQ=255)
                                          aTGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCGGGCGCCGCCGTTTGTTTTTACACTGAAACAGcc                                                                                                            >  1:1765284/1‑148 (MQ=255)
                                          aTGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACGGAAACAGCa                                                                                                            >  1:2624934/1‑149 (MQ=255)
                                           tGCTTAAGTTTTTCTCTGCATTCATAAAAAATAAAATCTGTGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGCCGCAGCGTTTTGTTATTCCACTGAAACAGCat                                                                                                           <  2:89175/149‑1 (MQ=255)
                                            gCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCGGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCata                                                                                                          <  1:1027127/149‑1 (MQ=255)
                                               tAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTg                                                                                                       >  2:136216/1‑149 (MQ=255)
                                                aaGTTATTCTCTGCATTCATAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTgg                                                                                                      <  2:1091721/149‑1 (MQ=255)
                                                aaGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTgg                                                                                                      <  1:3744700/149‑1 (MQ=255)
                                                 aGTTATTCTCTGCATTCATAAAAAATAAAACCTGGGATTACAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGgc                                                                                                     <  1:3916951/149‑1 (MQ=255)
                                                 aGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTGTTGTTATTCCACTGAAACAGCATATTGgc                                                                                                     >  2:2782673/1‑149 (MQ=255)
                                                   ttATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGgcgc                                                                                                   <  2:629369/149‑1 (MQ=255)
                                                   ttATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGgcgc                                                                                                   >  2:1908229/1‑149 (MQ=255)
                                                   ttATTCTCTCCATTCAGAAAAAATAAAATCGGGGCTTTCACCGGCGGCAGCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGgcgc                                                                                                   <  1:2550420/149‑1 (MQ=255)
                                                    tATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCCGGACCCCGGGCGCCGCGTTTTGTTATTCCACTGAAACAGCATATTGgcgcg                                                                                                  >  1:65316/1‑148 (MQ=255)
                                                     aTTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTATGTTATTCCACTGAAACAGCATCTTGGCGCTg                                                                                                 >  2:2142558/1‑149 (MQ=255)
                                                          ctGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCGGAAGGt                                                                                            >  2:2082840/1‑149 (MQ=255)
                                                            gCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGa                                                                                          >  2:3510814/1‑149 (MQ=255)
                                                            gCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGa                                                                                          >  2:3510896/1‑149 (MQ=255)
                                                             cATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAg                                                                                         >  2:3286387/1‑149 (MQ=255)
                                                             cATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAg                                                                                         >  2:347658/1‑149 (MQ=255)
                                                              aTTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGt                                                                                        >  2:2011118/1‑149 (MQ=255)
                                                              aTTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGt                                                                                        <  2:3453624/149‑1 (MQ=255)
                                                              aTTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGt                                                                                        >  2:4046958/1‑149 (MQ=255)
                                                                tCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtg                                                                                      >  2:1185462/1‑149 (MQ=255)
                                                                tCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCCGCGTTTTTTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTtg                                                                                      >  1:2642512/1‑149 (MQ=255)
                                                                    aaaaaaTAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAATGTGAGTTGTGCg                                                                                  >  2:3850870/1‑149 (MQ=255)
                                                                    aaaaaaTAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCAGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCg                                                                                  >  1:3592114/1‑149 (MQ=255)
                                                                      aaaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCGGGCGCAGCGTTTTGTTATTCCACGGAAACAGCCTAGTGGCGCTGAAGGTGAGTTGTGCGtt                                                                                >  2:1396294/1‑149 (MQ=255)
                                                                       aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGGTGTGCGTTa                                                                               >  2:310768/1‑149 (MQ=255)
                                                                       aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTGTTGTTATTCCACTGAAACAGCCTATTGGCGCTGAAGGTGAGTTGTGCGTTa                                                                               >  2:2382743/1‑149 (MQ=255)
                                                                       aaataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTa                                                                               >  1:3860440/1‑149 (MQ=255)
                                                                         ataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCAGATTGGCGCGGAAGGTGAGTTGTGCGTTAGc                                                                             >  2:1623938/1‑149 (MQ=255)
                                                                         ataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGc                                                                             >  2:1009014/1‑149 (MQ=255)
                                                                         ataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGc                                                                             >  2:3154531/1‑149 (MQ=255)
                                                                         ataaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCGGAAGGTGAGTTGTGCGTTAGc                                                                             >  2:1009192/1‑149 (MQ=255)
                                                                           aaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGt                                                                           <  2:3313214/149‑1 (MQ=255)
                                                                           aaaatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGATACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGt                                                                           >  1:2133836/1‑149 (MQ=255)
                                                                           aaaatCTGGGAGTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGt                                                                           <  2:3316010/149‑1 (MQ=255)
                                                                             aatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCAGGCGCAGCGGTTTGTTATTACACTGAAAAACCCAATTGGCGCGGAAGGTGTGTTGTGCGTTTGCGTCg                                                                         >  1:1899385/1‑149 (MQ=255)
                                                                             aatCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCg                                                                         >  1:4093761/1‑149 (MQ=255)
                                                                               tCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGGACCCCCGGCGCCGCGGGTTGTTATTGCACTGAAACAGCAAATTGGCGCAGTACGTGAGTTGTGGGGTAGCggcggc                                                                       >  1:1890495/1‑149 (MQ=255)
                                                                               tCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATCTTGGCGCTGAAGGTGAGTTGTGCGGTAGCGTCGGc                                                                       >  1:2936697/1‑149 (MQ=255)
                                                                                cTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCg                                                                      >  1:2048651/1‑149 (MQ=255)
                                                                                 tGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCCGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGa                                                                     >  2:3660833/1‑149 (MQ=255)
                                                                                 tGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGa                                                                     >  2:555296/1‑149 (MQ=255)
                                                                                  gggATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCGGGCGCCGCGGGTTGGTATTGCCCTGTAACAGCAGATTGGCGCTGGAGGTGTGTTGTGGGTTAGCGTCGGCgct                                                                    >  1:3581148/1‑147 (MQ=255)
                                                                                    gATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCAGCGTGTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTTGCGTCGGCGATaa                                                                  >  1:2543593/1‑149 (MQ=255)
                                                                                      tttCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAg                                                                >  2:1728039/1‑149 (MQ=255)
                                                                                         cAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTAt                                                             >  1:3384390/1‑149 (MQ=255)
                                                                                          aaCGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTAtt                                                            >  2:1854951/1‑149 (MQ=255)
                                                                                           aCGGCGGCATCCCTCCCCCGGAGATGAAAACCCAGTCCCACGGTACACCCCTGCGCCAGGGACCCCTGGCGCAGCGTTTTGTTATTCCACTGCAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTg                                                           <  2:3618796/149‑1 (MQ=255)
                                                                                              gcggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTgcgc                                                        >  2:1370705/1‑149 (MQ=255)
                                                                                              gcggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTgcgc                                                        <  1:711743/149‑1 (MQ=255)
                                                                                                ggcATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGGTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAACGTATTGCGCgg                                                      >  2:3940164/1‑149 (MQ=255)
                                                                                                 gcctccatccaCCGGAGATGAAACCCCAGTCCCCCGGTACCCCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGc                                                     <  1:2453470/146‑1 (MQ=255)
                                                                                                     ccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCGGGCGCCGCGGTTTGGTATTCCCCAGACACAGCCAATTGGCGCGGAACGTGGGGTGTGGGTGTGCGGGGGGGCTCAAGTAGTGGGGGGCCAGc                                                 >  1:2771880/1‑149 (MQ=255)
                                                                                                     ccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCCGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAAAACCATATTTGCGCTGAAGGTGAGTTGTGGGGTATCGGCGGCGATAAATTATTGCGCGGCCacc                                                 >  1:3533040/1‑147 (MQ=255)
                                                                                                     ccatccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTTTTATTGCACTGAAAAAGCATATTGGCGCGGAAGGTGAGTTGTGGGTTTGGGTCGGCGCTAAAGTATTTCGCGGCCCGc                                                 >  1:3531489/1‑149 (MQ=255)
                                                                                                      catccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCGGGCGCCGCGGTTTGTTTTTGCACAGAAAAAGCCTATTGGGGCGGCAGGTGAGTTGTGCGTTAGCGTCGGCGCTAAAGTATTTGGCGGCCAGcc                                                >  1:1846118/1‑149 (MQ=255)
                                                                                                       atccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCg                                               >  2:2345890/1‑149 (MQ=255)
                                                                                                        tccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCCGGTACCCCTGGCGCAGCGGTTTTTTTTTTCAATGAAAAAGCCTATTTGCGCGGAATGTGAGTTTTGGGGTAGAGTCGGCGCTAAAGTATTTAGCGGGCAGCCGc                                              >  1:3792285/1‑149 (MQ=255)
                                                                                                         ccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCt                                             <  2:2572280/149‑1 (MQ=255)
                                                                                                         ccaCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCt                                             <  2:1327711/149‑1 (MQ=255)
                                                                                                          caCCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCtt                                            <  2:3232439/149‑1 (MQ=255)
                                                                                                            ccGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTAc                                          >  2:931284/1‑149 (MQ=255)
                                                                                                                 gaTGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTAGTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTg                                     <  2:497766/149‑1 (MQ=255)
                                                                                                                  aTGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTgg                                    <  1:3006979/149‑1 (MQ=255)
                                                                                                                   tGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGt                                   <  2:3729013/149‑1 (MQ=255)
                                                                                                                      aaaCCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTcgc                                >  2:2286385/1‑149 (MQ=255)
                                                                                                                         cccAGTCCAACGGTACACCCCTGCGCCCGGTACCCCAGGCGCCGCGTTTTGTTATTACACTGAAAAAGCATATTGGCGCTGAAGGGGTGGTGTGGGGTAGCGGCGGCGCTAAAATATTTCGCGGCCCCCCCCGTAACCCGGGTCGCGGc                             >  1:1522268/1‑149 (MQ=255)
                                                                                                                              tCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTTCGCGGCCAGCCGCGTACCCGTGGTCGCGGCCAAAt                        >  2:3207247/1‑149 (MQ=255)
                                                                                                                                cAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgc                      <  1:2165143/149‑1 (MQ=255)
                                                                                                                                 aaCGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgct                     <  1:1185462/149‑1 (MQ=255)
                                                                                                                                   cGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgctgc                   <  1:3311424/149‑1 (MQ=255)
                                                                                                                                   cGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAAtgctgc                   <  1:1260669/149‑1 (MQ=255)
                                                                                                                                    ggTACACCCCTGCGCCAGGGACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGcc                  <  2:2765218/149‑1 (MQ=255)
                                                                                                                                        cacCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGtg              >  2:2601134/1‑148 (MQ=255)
                                                                                                                                         acCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTc             <  1:2554297/149‑1 (MQ=255)
                                                                                                                                          ccccTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTAACCGTGGTCGCGGCAAAATGCTGCCTGTTCa            >  1:2809704/1‑149 (MQ=255)
                                                                                                                                                   cAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCAc   >  2:1802762/1‑149 (MQ=255)
                                                                                                                                                    aGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCAcc  >  1:2037823/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
ATCTGAACACCATTCCCGTGCGTATCATTCCCGTGGAACACCATGCTTAAGTTATTCTCTGCATTCAGAAAAAATAAAATCTGGGATTTCAACGGCGGCATCCATCCACCGGAGATGAAAACCCAGTCCAACGGTACACCCCTGCGCCAGGTACCCCTGGCGCAGCGTTTTGTTATTCCACTGAAACAGCATATTGGCGCTGAAGGTGAGTTGTGCGTTAGCGTCGGCGATAAAGTATTGCGCGGCCAGCCGCTTACCCGTGGTCGCGGCAAAATGCTGCCTGTTCACGCGCCCACC  >  CP009273/1701134‑1701430

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑