| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,731,596 | C→A | 18.0% | intergenic (‑49/+117) | ydhP ← / ← ynhF | putative transporter/stress response membrane |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,731,596 | 0 | C | A | 18.0% | 692.7 / 96.3 | 250 | intergenic (‑49/+117) | ydhP/ynhF | putative transporter/stress response membrane |
| Reads supporting (aligned to +/- strand): ref base C (110/95); new base A (15/30); total (125/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.05e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.62e-01 | |||||||||||
Only 100 of 252 total aligned reads displayed.
CGCGCGCAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAACCCACGGCT > CP009273/1731448‑1731743 | cgcgcgCAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGc < 1:1772835/149‑1 (MQ=255) gcgcAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGaa < 2:473279/149‑1 (MQ=255) gcAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAg < 2:239095/149‑1 (MQ=255) gcAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTGGTCCCGATACCAACCGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAg < 2:585734/149‑1 (MQ=255) aaTGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCa > 1:3487793/1‑149 (MQ=255) aaTGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCa < 1:988195/149‑1 (MQ=255) aTGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCAt < 2:2866171/149‑1 (MQ=255) aTGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCAt < 1:2446134/149‑1 (MQ=255) gACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGa < 1:846764/149‑1 (MQ=255) aCGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGAc < 1:2522128/149‑1 (MQ=255) cGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTATTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACa > 2:2366880/1‑149 (MQ=255) gggCAACAAGCCCATTGGCGAGTACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCTCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAATCATGACAg < 2:2536315/149‑1 (MQ=255) gggCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAg < 1:2577339/149‑1 (MQ=255) gggCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAg < 1:509789/149‑1 (MQ=255) caacaaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCaa < 1:3075402/149‑1 (MQ=255) acaaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATc < 1:1628335/149‑1 (MQ=255) aaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATcac > 1:1453804/1‑149 (MQ=255) aaGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATcac > 1:2952825/1‑149 (MQ=255) ccATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACaaaa < 2:3487793/149‑1 (MQ=255) ccATTGGCGAGAACTCCGTTGACCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACaaaa > 2:2754357/1‑149 (MQ=255) ttGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTATAGTGGCGAAAGCATGACAGCAATCACaaaaaaa < 2:479673/149‑1 (MQ=255) ttGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACaaaaaaa < 2:3910915/149‑1 (MQ=255) tGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAAt < 2:1990009/149‑1 (MQ=255) cGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGaa < 2:3020572/149‑1 (MQ=255) aaCTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATa > 1:371727/1‑149 (MQ=255) aCTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATaa > 1:2343482/1‑149 (MQ=255) tCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACa > 2:3537978/1‑149 (MQ=255) gTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATCACaaag > 2:3623068/1‑148 (MQ=255) gTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACaaaa < 1:4047291/149‑1 (MQ=255) gTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAaga < 1:927652/149‑1 (MQ=255) ccGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGaa < 1:2263459/149‑1 (MQ=255) ccGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGaa < 1:186047/149‑1 (MQ=255) gATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGaaaa < 1:2135288/149‑1 (MQ=255) gATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGaaaa < 1:2562740/149‑1 (MQ=255) aTACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGACAac > 1:110239/1‑149 (MQ=255) aTACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAac > 2:840923/1‑149 (MQ=255) aTACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAac > 2:519492/1‑149 (MQ=255) tACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAaca < 1:3157538/149‑1 (MQ=255) aCCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAacac < 1:2787497/149‑1 (MQ=255) ccAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACACAAAGAGAAAACACt > 2:2964192/1‑149 (MQ=255) aaaCGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACttt < 2:1787915/149‑1 (MQ=255) aaaCGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACttt < 1:3746906/149‑1 (MQ=255) aaaCGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACttt < 1:3747139/149‑1 (MQ=255) cgcgCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGc < 1:3572300/149‑1 (MQ=255) gcgcCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGcc < 1:1386072/149‑1 (MQ=255) cgcCAATCGCCAGCGCCAGCAACGGATAGTAAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCa < 2:1005967/149‑1 (MQ=255) gcCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCAt > 2:1563338/1‑149 (MQ=255) cAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCAttt > 2:1307087/1‑149 (MQ=255) cAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCAttt < 1:241656/149‑1 (MQ=255) cAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCAttt < 1:2686008/149‑1 (MQ=255) tCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGc < 2:1244864/149‑1 (MQ=255) tCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGc < 2:3660474/149‑1 (MQ=255) cagcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaac < 2:710162/149‑1 (MQ=255) agcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaaca < 1:692293/149‑1 (MQ=255) gcgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaacaa > 1:705887/1‑149 (MQ=255) cgccatcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaacaaa < 2:2019642/149‑1 (MQ=255) cgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaacaaa < 1:4018664/149‑1 (MQ=255) cgccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaacaaa < 1:3038172/149‑1 (MQ=255) ccagcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTaacaaaca > 1:571067/1‑149 (MQ=255) gcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACagga > 1:2261061/1‑149 (MQ=255) gcAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACagga > 1:2261398/1‑149 (MQ=255) aaCGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaag > 2:3691707/1‑149 (MQ=255) aaCGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaag < 2:1609105/149‑1 (MQ=255) aaCGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaag < 1:3733188/149‑1 (MQ=255) tcGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGAGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCTTTTTGCTAACAAACaggaagg < 2:1250563/148‑1 (MQ=255) aCGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACaggaagg > 1:1571437/1‑149 (MQ=255) ggATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGgag > 2:645036/1‑149 (MQ=255) aTAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGAt > 2:3406499/1‑149 (MQ=255) tAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATg > 1:2473918/1‑149 (MQ=255) tAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATg > 1:3200183/1‑149 (MQ=255) aGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGc > 2:2348638/1‑149 (MQ=255) ttttCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGga > 2:2479244/1‑149 (MQ=255) tttCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGgag > 1:1147477/1‑149 (MQ=255) cATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAAc > 1:3889128/1‑149 (MQ=255) ttATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTc > 1:3704092/1‑149 (MQ=255) ttATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTc > 2:2873587/1‑149 (MQ=255) aTCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTccc > 1:2113057/1‑149 (MQ=255) aTCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTccc < 2:2813844/149‑1 (MQ=255) tctcCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCt < 1:3840958/149‑1 (MQ=255) gctcCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCt < 2:198167/148‑1 (MQ=255) ctcCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCACTc > 2:681249/1‑149 (MQ=255) aCCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCgaga > 1:2793064/1‑149 (MQ=255) aCCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCgaga > 2:141888/1‑149 (MQ=255) ctctTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAgg > 1:1232377/1‑149 (MQ=255) ctctTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAgg < 1:1507198/149‑1 (MQ=255) ctctTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAgg > 1:3277138/1‑149 (MQ=255) gTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGt < 2:1905143/149‑1 (MQ=255) ttACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAg > 2:963828/1‑149 (MQ=255) ttACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAg > 2:1235238/1‑149 (MQ=255) ttACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAg > 1:284143/1‑149 (MQ=255) gATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGc > 1:774774/1‑149 (MQ=255) atTCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGCGGGAGAACGCGCTCCCTCGCGAGGAAATCAGTGCAGCGCGGCAGt > 2:3222628/1‑149 (MQ=255) ttCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTc > 2:2035604/1‑149 (MQ=255) ttCATTAAAGTGGAGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTc > 2:3463841/1‑149 (MQ=255) ttAAAGTGGCGAAAGCATGACAGCAATCACAAAACAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAAc < 1:1242925/149‑1 (MQ=255) ttAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAAc < 1:3537978/149‑1 (MQ=255) aaGTGGAGAAAGCATGACAGCAATCACAAAACAATGAAAATAACAAACAGAGACAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAACCCa < 1:3332638/149‑1 (MQ=255) aGTGGAGAAAGCATGACAGCCATCACAAACAAATGAAAAGAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAACCAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAACCCAc < 2:3805638/149‑1 (MQ=255) gTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAAACCACg > 1:1396997/1‑149 (MQ=255) gCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACCGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAACCCACGGCt < 2:1870467/149‑1 (MQ=255) | CGCGCGCAATGACGGGCAACAAGCCCATTGGCGAGAACTCCGTTGTCCCGATACCAAACGCGCCAATCGCCAGCGCCAGCAACGGATAGTTAATTTTCATGCCTTATCTCCACCTCTTCGCGTCATTACGCGATATTCATTAAAGTGGCGAAAGCATGACAGCAATCACAAAAAAATGAAAATAACAAAAAGAGAAAACACTTTTGCCATTTTGCTAACAAACAGGAAGGAGATGCGAGGGAGAACGCGCTCCCTCGAGAGGAAATCAGTGCAGCGCGGCAGTCAAACCCACGGCT > CP009273/1731448‑1731743 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |