Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 1,884,978 | C→A | 5.4% | D183Y (GAT→TAT) | tsaB ← | tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 1,884,978 | 0 | C | A | 5.4% | 867.1 / 15.8 | 229 | D183Y (GAT→TAT) | tsaB | tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein; binding partner and protease for TsaD |
Reads supporting (aligned to +/- strand): ref base C (113/103); new base A (7/6); total (120/109) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 236 total aligned reads displayed.
CATTCTTTGCCCGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAGATA > CP009273/1884830‑1885126 | cattcTTTGCCCGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATc > 2:3853644/1‑149 (MQ=255) ttcTTTGCCCGGAAGTTTCTTCAATTCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGAAACGCAATCGGCAGCATATCTTAAGAAGCAGGAAGTAACACTTCGCCATcgc > 2:362224/1‑149 (MQ=255) cTTTGCCCGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCgcgc < 1:1553175/149‑1 (MQ=255) cTTTGCCCGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCgcgc < 1:1684533/149‑1 (MQ=255) ttGCCCGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCaa < 1:2813947/149‑1 (MQ=255) cccGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAAc < 2:4061640/149‑1 (MQ=255) cccGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAAc > 2:345361/1‑149 (MQ=255) cGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCa > 2:3773989/1‑149 (MQ=255) cGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCa > 2:667486/1‑149 (MQ=255) cGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCa > 2:2035950/1‑149 (MQ=255) cGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCAACGCGCAAAACCa > 2:1179722/1‑149 (MQ=255) gAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGc > 2:3953741/1‑149 (MQ=255) aGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGccc > 2:2566586/1‑149 (MQ=255) tttCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGc < 1:1955672/149‑1 (MQ=255) tcttcCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATAGCGCAAAACCAGCCCGctc > 1:1442481/1‑149 (MQ=255) cATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCttt < 2:796081/149‑1 (MQ=255) cATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCttt < 2:2854755/149‑1 (MQ=255) tGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTAc > 1:4026672/1‑149 (MQ=255) gCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTAcc > 1:540448/1‑149 (MQ=255) gACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCga > 1:977899/1‑149 (MQ=255) gACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCga < 2:24609/149‑1 (MQ=255) gACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCga > 1:635672/1‑149 (MQ=255) cGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATAGCGCAAAACCAGCCCGCTCTCTTTACCgaga < 2:2633761/149‑1 (MQ=255) ttgttACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATc < 1:2269195/149‑1 (MQ=255) ttgttACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATc > 2:2838444/1‑149 (MQ=255) ttgttACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATc < 1:179786/149‑1 (MQ=255) ttACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCgg > 2:321624/1‑149 (MQ=255) aCGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGcc > 2:2690804/1‑149 (MQ=255) aataaaCCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCt > 1:2643252/1‑149 (MQ=255) aaaCCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGc > 2:3523292/1‑149 (MQ=255) aaaCCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGc > 2:2889554/1‑149 (MQ=255) aaCCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGcc < 1:1723595/149‑1 (MQ=255) ggTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGcc > 2:556915/1‑149 (MQ=255) ggTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGcc < 2:1677324/149‑1 (MQ=255) ggCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATAGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTcc > 2:668626/1‑149 (MQ=255) gCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTccc < 1:1332074/149‑1 (MQ=255) gCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTccc > 1:2220127/1‑149 (MQ=255) tCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGt < 2:3688393/149‑1 (MQ=255) accgccaccgTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCAc > 2:2369052/1‑149 (MQ=255) accgTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTc > 1:316660/1‑149 (MQ=255) accgTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTc > 1:1633724/1‑149 (MQ=255) accgTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTc < 1:1019708/149‑1 (MQ=255) tACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGaa < 1:159722/149‑1 (MQ=255) tACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGaa > 1:1541920/1‑149 (MQ=255) aCCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGaaa < 2:3810701/149‑1 (MQ=255) ccTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGc < 2:1218518/149‑1 (MQ=255) aaaCATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCa > 1:3142832/1‑149 (MQ=255) aaaCATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCa > 1:2138317/1‑149 (MQ=255) aCATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTATCACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGGAtt < 2:3897915/149‑1 (MQ=255) cATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATAGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTc < 2:1100229/149‑1 (MQ=255) tCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGt < 2:2084102/149‑1 (MQ=255) cTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGtt < 1:2269707/149‑1 (MQ=255) gACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCa < 2:830047/149‑1 (MQ=255) gACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCa > 1:3739412/1‑149 (MQ=255) cacGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATg < 1:3906299/149‑1 (MQ=255) acGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATgg > 2:3748265/1‑149 (MQ=255) acGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATgg > 1:3239092/1‑149 (MQ=255) gCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGAc < 1:929689/149‑1 (MQ=255) cAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACg > 1:3667931/1‑149 (MQ=255) cAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACg > 1:3668107/1‑149 (MQ=255) aaTCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGa > 2:3036818/1‑149 (MQ=255) tCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGAtt < 1:345361/149‑1 (MQ=255) tCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGAtt > 2:3825314/1‑149 (MQ=255) tCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGAtt > 1:3657865/1‑149 (MQ=255) cGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGAttt < 2:1592734/149‑1 (MQ=255) gcagcaTATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCg > 1:3822431/1‑149 (MQ=255) gcaTATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGt > 1:3367374/1‑149 (MQ=255) atatCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGttt > 1:1141238/1‑149 (MQ=255) tatCTTCAGCAGCAGGCCGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTg > 2:1727391/1‑149 (MQ=255) atCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGa < 2:1531059/149‑1 (MQ=255) tCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAg < 1:3746301/149‑1 (MQ=255) tCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAg < 1:3746239/149‑1 (MQ=255) tCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAg > 1:3548493/1‑149 (MQ=255) ttCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTa > 1:3950230/1‑149 (MQ=255) tCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTAc < 2:1927438/149‑1 (MQ=255) tCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTAc < 2:3461032/149‑1 (MQ=255) cagcagGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCt < 1:1355980/149‑1 (MQ=255) agcagGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCtt < 1:862363/149‑1 (MQ=255) agcagGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCtt < 1:2116517/149‑1 (MQ=255) agcagGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCtt > 2:1728690/1‑149 (MQ=255) agcagGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCGCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCtt < 2:1467413/149‑1 (MQ=255) gcaggcagTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTc < 2:3304220/149‑1 (MQ=255) gcagTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGtt < 2:3386317/149‑1 (MQ=255) gcagTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGtt < 2:2490610/149‑1 (MQ=255) agTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTttc > 1:1102273/1‑149 (MQ=255) agTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTttc > 2:1331099/1‑149 (MQ=255) agTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTttc > 2:1772451/1‑149 (MQ=255) gTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTttct > 2:3152141/1‑149 (MQ=255) tAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTttctt > 1:3837571/1‑149 (MQ=255) tAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTttctt > 1:2032153/1‑149 (MQ=255) acacTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGACAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCa > 2:3598952/1‑149 (MQ=255) acacTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCa > 2:500415/1‑149 (MQ=255) acacTTCGCCATAGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCa < 2:122020/149‑1 (MQ=255) cacTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCAc < 2:635672/149‑1 (MQ=255) ttCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGt > 2:1774891/1‑149 (MQ=255) tCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTg < 1:2847042/149‑1 (MQ=255) gCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGcc > 1:2224321/1‑149 (MQ=255) gCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATACGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCAGCGTGcc > 2:3584012/1‑149 (MQ=255) aTCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAGa < 1:2939292/149‑1 (MQ=255) cgcgCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAGATa > 1:4111928/1‑149 (MQ=255) | CATTCTTTGCCCGGAAGTTTCTTCCATGCGACGTTGTTACGTAAATAAACCGGTTCGGCATGTTCCACCGCCACCGTTTTACCCTCAGCAAACATCTGACACGCAATCGGCAGCATATCTTCAGCAGCAGGCAGTAACACTTCGCCATCGCGCAAAACCAGCCCGCTCTCTTTACCGAGATCCGGCCAAGCTTGCCAGCCCGTCCCTACCGTCACCCATTCGCCGGAAAGCTGTTGCATTCGTTCATGGACGATTTCGGGTTTGAGTACGGCTTCGGTTTCTTCACCGTGCCAGATA > CP009273/1884830‑1885126 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |