| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,004,533 | G→T | 100% | T151T (ACG→ACT) | yedL → | putative acyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,004,533 | 0 | G | T | 97.4% | 519.4 / 4.1 | 199 | T151T (ACG→ACT) | yedL | putative acyl transferase |
| Reads supporting (aligned to +/- strand): ref base G (3/4); new base T (76/109); total (86/113) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 201 total aligned reads displayed.
AGATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTGA > CP009273/2004387‑2004678 | aGATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGActct < 1:2612425/149‑1 (MQ=255) gATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTa < 2:2686761/149‑1 (MQ=255) aTGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTAt < 2:660116/149‑1 (MQ=255) aTGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTAt < 1:2746735/149‑1 (MQ=255) cTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCGATGCGa > 2:3909876/1‑149 (MQ=255) cATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTAATCTATGCGaaaa > 2:1154816/1‑149 (MQ=255) cGCCTGAGCTTAGAAACGGGTACAAAGGCTGGTTTTACGGCCTGCCATCAACTTTATTTTAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCTATTTTTATCATTGACTCTATGCGAAaat‑aa < 1:995707/149‑1 (MQ=255) cTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATTAGAAaat‑aa‑tta > 2:3007496/1‑147 (MQ=255) tGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑aa < 2:677041/149‑1 (MQ=255) gAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCCACTTTATTTGAAGCCTGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AAt < 2:414921/149‑1 (MQ=255) gAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AAt < 1:3643914/149‑1 (MQ=255) aGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AAtt < 2:2698601/149‑1 (MQ=255) aGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AAtt < 1:3976397/149‑1 (MQ=255) aGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AAtt < 2:633337/149‑1 (MQ=255) aGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AAtt < 2:633400/149‑1 (MQ=255) cTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGc < 2:2442443/149‑1 (MQ=255) cTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGc > 2:1102827/1‑149 (MQ=255) tAGAAACGGGTACACAGGCTGGATTTACGCCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTAGCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCa < 1:4024484/149‑1 (MQ=255) aGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCAATTACTCTATGCGAAAAT‑AA‑TG‑AATTGCCAt > 2:1725121/1‑149 (MQ=255) aaaCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGa < 1:1419098/149‑1 (MQ=255) aaCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCAATGACTCTATGCGAAAAT‑AA‑TG‑AATTGACATGAg > 2:1129462/1‑149 (MQ=255) aCGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGTCTCTATGCGAAAAA‑AA‑TT‑AATTTCCCTTAGc > 2:715635/1‑149 (MQ=255) gggTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCa > 2:335067/1‑149 (MQ=255) tACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGAc < 1:12534/149‑1 (MQ=255) tACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGAc < 2:4063367/149‑1 (MQ=255) acacAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTATCATTGACTCTATGCGAAAAT‑AA‑AG‑AATTTCCAAGAGCCAGACg > 2:4005160/1‑149 (MQ=255) acaGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTACTCTATGCGCAAAT‑AA‑TG‑AATTGGCATGGTCCAGCCgca > 1:2231444/1‑149 (MQ=255) acaGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACgca < 2:3487204/149‑1 (MQ=255) acaGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTACACTATTCGAAAAT‑AA‑TG‑AATTGCCCTGAGCCAGCCgca > 1:160029/1‑149 (MQ=255) caGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTATCATTTACTCTATTCGAAAAT‑AATTT‑AATTG‑CATGAGCCAGACgcag > 1:540031/1‑149 (MQ=255) ggCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACgccgca > 2:2151606/1‑149 (MQ=255) ggCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCAATTCGAAAAT‑AA‑TG‑AATTTCCATGTGCCAGACgcagca > 2:47718/1‑149 (MQ=255) gCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATTAATCTATTAGAAAAA‑AA‑AG‑AAATTACATGAGCCACACccaccaa > 1:2641557/1‑148 (MQ=255) cTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGcaca < 2:2306895/149‑1 (MQ=255) cTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGcaca < 2:1110668/149‑1 (MQ=255) aTTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCt < 2:2002457/149‑1 (MQ=255) aTTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTTTGATTTTCTGGATTCGTAAAT‑AA‑TG‑AATTTGCATGAGCCAGACGCCGCACAATCt > 1:65904/1‑149 (MQ=255) aTTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTTTAATTTTCTCTATTCGAAAAT‑AA‑AG‑AAATTACAAGAGCCACACGCAGCACAATCt > 1:3465631/1‑149 (MQ=255) tttACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTTATTTAATATATTCGAAAAA‑AA‑AT‑AATTTTCATGAGGCCCACGcaccaccataat > 1:13082/1‑143 (MQ=255) tttACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCtt < 1:3294383/149‑1 (MQ=255) aCGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCa < 2:488793/149‑1 (MQ=255) cGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCAt < 2:109247/149‑1 (MQ=255) ccTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCg < 2:1515264/149‑1 (MQ=255) cttccATCAACTTGATCTGAAGCAAGGTTTCGCTTTTTGCGAACCGTTTGCTGATTATCGACGTGATCCACACAGTCGATTTTTATCATTGACTCTAGGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGa < 2:3549635/146‑1 (MQ=255) cTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGa < 2:3550345/149‑1 (MQ=255) ccATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGt < 2:831533/149‑1 (MQ=255) cATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTACGCTATGCGAAAATAAA‑TA‑AATTG‑CATGAGCCACACCCAGCCCATTAGTGGATTGGAAGtg > 1:2262322/1‑149 (MQ=255) aaCTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGtgctgc < 1:773464/149‑1 (MQ=255) tttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTTCTCTATTCGAAAAT‑AA‑TG‑AATTTGCATGTGCCACACGCAGCCCATTCTTGGATTCGTCGTGCTGGGcc > 2:2768370/1‑149 (MQ=255) tttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AAATGGCATGAGCCAGACGCAGCACATTCTTTCATTCGACGTGCTGCGcc > 2:3093545/1‑149 (MQ=255) ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCt < 1:1154816/149‑1 (MQ=255) ttATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCt < 1:2358954/149‑1 (MQ=255) aaGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCtttattta < 1:1566862/149‑1 (MQ=255) aGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATTCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTttatttat > 2:246973/1‑149 (MQ=255) aGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTttatttat < 1:3749727/149‑1 (MQ=255) gCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATc < 1:906695/149‑1 (MQ=255) aTGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTTATTTTATCTTTGCGAAAAA‑AA‑AT‑AATTTCCATGAGCCCAAACCACCACCATATTTGATTAGACGTGGTGCGGCGTTTTTTATAAc > 1:2460943/1‑149 (MQ=255) ggTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACca < 2:1451258/149‑1 (MQ=255) gTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGAATCTATGCGAAAAT‑AA‑TG‑AATTTTCATGAGCCAGACGCAGCACAATCTTGCATTCGACGTGCTGCGCCTTTATTTATAACcag > 2:1369703/1‑149 (MQ=255) tttCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTGACACTATTCGAAAAA‑AA‑TG‑AATTTCCATGAGCCAGACGCAGCAAAATCATGCATTCGACGTGCTGCGCCGTTATTTATCaaccac > 2:801688/1‑144 (MQ=255) tCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACcagcag < 2:2606282/149‑1 (MQ=255) tCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAATTTACTATTTGGGAAAAT‑AA‑TGAAATTGCC‑TGTGCCAGACGCAGCACAAATTTGCCTTAGACCTGGTGGGGCGTGATTTTTCACccgcag > 2:3443104/1‑149 (MQ=255) cGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTTTAATTTTGAAGATTCGAAAAA‑AA‑TT‑TATTGGCATGAGCCACACGCAGCACCATATTGGCATCTACGTGGTGCGCCGTTTTTTTTAACCAGCAgg > 1:1818898/1‑149 (MQ=255) cGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATTCGAAAAT‑AA‑TT‑AATTTCCATGAGCCAGACGCAGCACATTATTTCATTCGACGTGCATCGCCGTTATTTATAACcagcacg > 2:3222677/1‑147 (MQ=255) gCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGa < 2:199528/149‑1 (MQ=255) gCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCAATGACTCTATGCGAAAAT‑AA‑AG‑AATTGCCATGAGCCAGACGCACCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGa > 2:3925923/1‑149 (MQ=255) gCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATAAATTAATATATTCGAAAAA‑AA‑TG‑AAATTCCAAGAGACACACGCACCCAAATATTTGATTAGACGTGCAGCGCCTTTATTTATAACCAGCAGGa > 1:2952108/1‑149 (MQ=255) gATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGTCTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTAGTGCATTCGACGTGCTGCGCCGTTATTTATAACAAGCAGGAAAc > 2:2504304/1‑149 (MQ=255) gCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCt < 2:1905902/149‑1 (MQ=255) gAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTg < 2:128795/149‑1 (MQ=255) gAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGAGTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCCTGAGCCACACGCAGCACAATCTTGCATTAGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTg > 2:2599902/1‑149 (MQ=255) aaCCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTTACTCTATTCGAAAAT‑AA‑AT‑AATTTCCATTAGCCAGACGCAGCACAATCTTGGATTCGACGTGCTGCGCCTTTATTTATCAACACCAGGAAAACCCTTGt > 2:2172233/1‑149 (MQ=255) tttGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑AT‑AATTTCCATGAGCCAGACGCAGCACATTATTGCATTCGACGTGCTGCGCCGTTATTTTTAACCACCAGGAAACCCCTTGTCCATa > 2:457936/1‑149 (MQ=255) tGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGa < 1:3438483/149‑1 (MQ=255) gCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGAc < 2:13082/149‑1 (MQ=255) gATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGcc < 2:2923810/149‑1 (MQ=255) tATCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCt < 2:222558/149‑1 (MQ=255) aTCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCtt < 1:3583195/149‑1 (MQ=255) tCGACTTGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTc < 1:2913805/149‑1 (MQ=255) ttGATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACAt < 2:2359396/149‑1 (MQ=255) gATCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATgc < 1:823046/149‑1 (MQ=255) aTCCACACAGTCGATTTTTATAATTTACTCTATGCGAAAAT‑AA‑TG‑AATTGGCATGAGCCAGAAGCCGCACAAACTTTCATTCGACCTGCTGCGCCCTTATTTATCACCAGCAGGAAACGCCTTGTCCAAAGACGCCCCGTCCACCTgcg > 2:1230216/1‑149 (MQ=255) tCCACACAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATgcgc < 1:3122339/149‑1 (MQ=255) ccACCCAGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGcc < 2:602105/149‑1 (MQ=255) acacaGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCcac < 1:1842668/149‑1 (MQ=255) acacaGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCcac < 1:1844298/149‑1 (MQ=255) cacaGTCGATTTTTATCAATTAAACTATGCGAAAAA‑AA‑AG‑AAATTCCAAGAGCCACACGCAGCACAATATTTCAATAGACGTGCTGCGCCTTTATTTATAACCACCAGGAAACACCCTTTCCAAAGAAGCCCCATACACAAACGCcaca > 2:580736/1‑149 (MQ=255) acaGTCGATTTTTATCATTTACTCAATTCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGAAGCCGCACAATCTTGCATTCGACCTGCTGCGCCTTTATTTATCACCAGCACGAAAAGCCATGTCCATAAAAGCCCCATCCACATTCGCCCCaa > 2:3431052/1‑149 (MQ=255) aGTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGa < 2:2641557/149‑1 (MQ=255) gTCGATTTTTATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCCCAAGaa > 2:2175685/1‑149 (MQ=255) gATTTTTATCATTGACGCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAAcc < 1:1542270/149‑1 (MQ=255) tttttATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACctc > 2:2023793/1‑149 (MQ=255) tttttATCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACctc > 1:3800474/1‑149 (MQ=255) tttttATCATTGACTCTAGGAGAAAAT‑AA‑TG‑AATTGCCATGAGACAGTCGAAGCACATTCTTGAATTAGAGGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTACACATGCGCCACAAGAAACctc < 2:2977581/149‑1 (MQ=255) aTCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTc > 1:935990/1‑149 (MQ=255) tCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTcc > 2:2262559/1‑149 (MQ=255) tCATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTcc < 1:2982293/149‑1 (MQ=255) cATTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCa < 1:1592131/149‑1 (MQ=255) aTTGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAg < 1:1352565/149‑1 (MQ=255) ttGACTCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGt > 2:2058198/1‑149 (MQ=255) | AGATGCCTTCATCGCCTGAGCTTAGAAACGGGTACACAGGCTGGATTTACGGCCTGCCATCAACTTTATTTGAAGCATGGTTTCGCTGATTGCGAACCGTTTGCTGATTATCGACTTGATCCACACAGTCGATTTTTATCATTGACGCTATGCGAAAAT‑AA‑TG‑AATTGCCATGAGCCAGACGCAGCACATTCTTGCATTCGACGTGCTGCGCCTTTATTTATCACCAGCAGGAAACGCCTTGTCCATAGACGCCCCTTCCACATGCGCCACAAGAAACCTCTATTCCAGTGA > CP009273/2004387‑2004678 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |