| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,587,434 | T→A | 5.2% | L595F (TTA→TTT) | tmcA ← | elongator methionine tRNA (ac4C34) acetyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,587,434 | 0 | T | A | 5.2% | 872.7 / 3.1 | 310 | L595F (TTA→TTT) | tmcA | elongator methionine tRNA (ac4C34) acetyltransferase |
| Reads supporting (aligned to +/- strand): ref base T (110/175); new base A (22/3); total (132/178) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.81e-06 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 313 total aligned reads displayed.
TCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACGGT > CP009273/2587288‑2587582 | tctTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTaa > 2:2707483/1‑149 (MQ=255)tctTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCCGTAATGCCAGTTCACTGGGTTGTAACACACGCACTAAGCAACCTaa > 2:2991303/1‑149 (MQ=255) tCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAacga < 2:3660222/149‑1 (MQ=255) gCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGtt < 2:938201/149‑1 (MQ=255) gCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGtt < 2:2582644/149‑1 (MQ=255) gACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAAt < 2:2298140/149‑1 (MQ=255) cGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAg < 1:2912826/149‑1 (MQ=255) ggACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGc < 2:1167348/149‑1 (MQ=255) ccAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGa < 1:2538869/149‑1 (MQ=255) cAGTAACATCGTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGAc < 2:2559917/149‑1 (MQ=255) tAACATCTTGCGGCCTTAAAGTTTAAGTGTGTTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGAt < 1:1521040/149‑1 (MQ=255) cATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAg < 1:1031198/149‑1 (MQ=255) ttGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACCCAGCGCCGGTAATTCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGaa > 1:3367995/1‑149 (MQ=255) ttGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTAAGTAAAAGCCCACCCAGCGCCGGTAATTCCCGTTCACTGGTTTTTAACAGACGCAAAAAGCAACCAAACCACGTTAAAAGCGGACGATGAGCGaa > 1:1941835/1‑149 (MQ=255) tGCGGCCTTAATGTTTATGTGTGGTAAATAACTGCGCATCAGTGGCTTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGaaa < 1:3784109/149‑1 (MQ=255) tGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCTTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGaaa < 1:2936835/149‑1 (MQ=255) tGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGaaa < 1:1666008/149‑1 (MQ=255) gCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTATTTAAAACCCCACCCACCCCCCCGAATTCCAGTTAACTGGTTTGTTAAAGAACCCAAAAGCAAACAAACCAAGGTAAAAACGGCCCAAGAGCCAAAg > 1:3120736/1‑149 (MQ=255) gCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTGTTTATTTAAACGCCCCCGCAGCCCCGGTAATGCCAGGTCACTGGTTTGTAACAGACGCAAAAAGCAACCAAACCACGGTAATATCGGACGCTGAGCGaaac > 1:2136826/1‑148 (MQ=255) ggCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCa < 2:423006/149‑1 (MQ=255) ccTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTGTGTAAACGCCCACCCAGCGCCGGTAATGCCACTTAACTGGTTTTTTAAAGACGCAATAATAAACCAAACGACGTTAATAGCGGACGATTATCGAAAGCaaa > 1:1435575/1‑149 (MQ=255) ccTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCaaa > 2:190934/1‑149 (MQ=255) tGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAATCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAAc > 2:1885362/1‑149 (MQ=255) tGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAAc < 2:1819234/149‑1 (MQ=255) tGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAAAAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAAc > 2:572682/1‑149 (MQ=255) tGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTATTTAAACGCCCACGCAGCGCCGGTAAAGCCAGTTCACAGGTTTTTAAAAGAAGCAAAAAACAACCAAACGACGGTAATATCGGACCATGAGCGAAAGCAAAAc > 1:3604711/1‑149 (MQ=255) aaGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCgg > 2:3475388/1‑149 (MQ=255) aaGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTATGTAAAACCCCACGCAGCGCCCGTAAAGCCACTTCAAGGGTTTTTAAAAGACCCAAAAAGCAAACAAAACACGTTTATAGAGGACCATGAGCGAAAACaaaaaccg > 1:1848610/1‑145 (MQ=255) aGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTGTGTAAACCCCCACCCAGCCCCGGTAATGCCACTTCACTGGTTTGTTACAGACCCAAAAAGCAACCAAACGACGGTAATAGCGGACCCTGAGCGAAAGCAAAAACGGc > 1:198749/1‑149 (MQ=255) gTTTAAGTGTGTTAAATACCGGCGCACCAGTGGGGTTTTTCTGTAACCGCCCACGCAGCGCCGTTAATGCCAGTTCAGTGTTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGcc < 1:1425862/149‑1 (MQ=255) gTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGcc > 2:126511/1‑149 (MQ=255) aCATCACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgt < 2:3354656/149‑1 (MQ=255) aCATAACGGCGCCTCACGGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATCGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgt < 2:40026/149‑1 (MQ=255) aaCTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCCGTTCACGGGGTTGTAACAGACGCAATAATCAACCTAACGACGGTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCCGTTCAAGCCCggcgtc > 2:728294/1‑149 (MQ=255) aaCTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcgtc > 2:301117/1‑149 (MQ=255) aCTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcgtcg > 2:545972/1‑149 (MQ=255) aCTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGGTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAgtcgtcg > 2:2396428/1‑149 (MQ=255) aTCAGTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGaaa < 1:1326983/149‑1 (MQ=255) agtgggttttttATGTAAACGCCCAGGCAGCGCCTTTATTGCCTGTTAACTGGTTTTTAAAATCCGAATTAAGCAACATAACGACGTTATTAGCGTACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGa < 1:3977342/142‑1 (MQ=255) cTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGAc < 2:2564333/149‑1 (MQ=255) tttttCTGTAAACGCCCACGCAGCGCCGGTACTGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATc > 1:400430/1‑149 (MQ=255) tttttCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATc > 1:2468614/1‑149 (MQ=255) tttCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGt < 2:3451558/149‑1 (MQ=255) tttCTGAAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGTTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGt < 1:3838602/149‑1 (MQ=255) tttAAACGCCCACGCAGCGCCGGTAATGCCATTTCACTGGTTTGTTACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAg < 1:693417/147‑1 (MQ=255) tGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAg > 2:2522808/1‑149 (MQ=255) tGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAg > 2:1262769/1‑149 (MQ=255) tGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAg > 2:453394/1‑149 (MQ=255) gTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGt > 2:1833571/1‑149 (MQ=255) taacccccccCGCAGCGCCGGTAAGGCCAGTTCAGTGGTTTGAACCAGACGCAATAAGAAACCTAACGACGTTAATAGCGGACGATGAGCGAAACCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTg < 1:3484250/143‑1 (MQ=255) tAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTg < 2:3760391/149‑1 (MQ=255) tAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTg < 2:1717016/149‑1 (MQ=255) aaaccGCCCCCGCCGCGCGGTTAAGGCCAGTTCTGTGGTTTGAAACAGACGCAAAAAGCAACCAAACGACGTTAATCGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTg < 1:518/145‑1 (MQ=255) aaaCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTgg > 1:1725446/1‑149 (MQ=255) aCGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGAt > 2:328899/1‑149 (MQ=255) cGCCCACGCAGCGCCGGTAATGCCAGTTCACTGTTTTGTAACCGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATc < 1:117876/149‑1 (MQ=255) ccACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAAc > 1:911470/1‑149 (MQ=255) ccACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAAc > 2:1101404/1‑149 (MQ=255) cACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACa < 1:1380638/149‑1 (MQ=255) aCGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAg < 1:3586341/149‑1 (MQ=255) cAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGaa < 2:3910439/149‑1 (MQ=255) cgcCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCg < 2:3862612/149‑1 (MQ=255) gcCGGTAATGCCAGTTCACTGGTTTTTAACAGACGCAATAACAAACCTAACGACGTTAATCGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGt < 1:1813342/149‑1 (MQ=255) ccGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGtt < 2:1985531/149‑1 (MQ=255) ccGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGtt < 2:4021847/149‑1 (MQ=255) cGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGTGttt > 1:123802/1‑149 (MQ=255) cGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGttt < 2:1621482/149‑1 (MQ=255) gTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCg > 2:1554942/1‑149 (MQ=255) tAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGc < 1:2955557/149‑1 (MQ=255) aTGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCa > 2:1436370/1‑149 (MQ=255) aTGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCa > 2:2773296/1‑149 (MQ=255) tGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCAt > 1:787043/1‑149 (MQ=255) gCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCAtt > 1:3869274/1‑149 (MQ=255) aGTTCACTGGTTTTTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCa < 1:98514/149‑1 (MQ=255) aGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCa < 2:1480796/149‑1 (MQ=255) ttCACTGGTTTGTAACAGACGCAATACGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACt < 1:3061282/149‑1 (MQ=255) cACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTgc > 1:263831/1‑149 (MQ=255) cACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTgc < 2:208119/149‑1 (MQ=255) cACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTgc > 1:3238647/1‑149 (MQ=255) gTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCgag > 2:967693/1‑149 (MQ=255) tttGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGAGCAACAGGAAGCGTTTCGCCATTCCACTGCGCgaga > 1:3089379/1‑149 (MQ=255) tGTAACAGACGCAATAAGCAACCTAACGACGTTAAGAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGc < 2:3224097/149‑1 (MQ=255) gTAACCGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCt < 2:2497657/149‑1 (MQ=255) gTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCt < 2:870948/149‑1 (MQ=255) gTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCt > 1:2694512/1‑149 (MQ=255) gTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCt > 2:2202/1‑149 (MQ=255) gTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCt > 2:2197/1‑149 (MQ=255) tAACCGACGCAATAAGCAACCAAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCtt < 1:48172/149‑1 (MQ=255) gACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCa > 2:1867220/1‑149 (MQ=255) aTAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGa < 2:1355446/149‑1 (MQ=255) aTAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGa < 2:653748/149‑1 (MQ=255) aTAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGa < 2:1355178/149‑1 (MQ=255) aTAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGACATTCCACTGCGCGAGAGCTTGCGCATCGCGa > 2:1057246/1‑149 (MQ=255) aGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGt > 1:3231079/1‑149 (MQ=255) aCCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAAc < 1:2315178/149‑1 (MQ=255) aCCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAAc < 1:2707483/149‑1 (MQ=255) aCCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAAc < 2:1435248/149‑1 (MQ=255) aCCTAACGACGTTAAGAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAAc < 1:2991303/149‑1 (MQ=255) ccTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACg < 1:1807967/149‑1 (MQ=255) ccTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACg < 1:330157/149‑1 (MQ=255) | TCTTCCCGCTGACGGACCAGTAACATCTTGCGGCCTGAAAGTTTAAGTGTGGTACATAACTGCGCATCACTGGCGTTTTTCTGTAAACGCCCACGCAGCGCCGGTAATGCCAGTTCACTGGTTTGTAACAGACGCAATAAGCAACCTAACGACGTTAATAGCGGACGATGAGCGAAAGCAAAACCGGCCAGTTCAAGCCAGTCGTCGTCAGAAAGGACGGCATCGTTTAGTGGATCAACAGGAAGCGTTTCGCCATTCCACTGCGCGAGAGCTTGCGCATCGCGACGTAAACGGT > CP009273/2587288‑2587582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |