Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,881,078 G→T 35.4% G198G (GGC→GGA cysH ← phosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,881,0780GT35.4% 380.2 / 226.2 251G198G (GGC→GGAcysHphosphoadenosine phosphosulfate reductase; PAPS reductase, thioredoxin dependent
Reads supporting (aligned to +/- strand):  ref base G (94/68);  new base T (41/48);  total (135/116)
Fisher's exact test for biased strand distribution p-value = 8.53e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

Only 100 of 254 total aligned reads displayed.

TATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCG  >  CP009273/2880934‑2881226
                                                                                                                                                |                                                                                                                                                    
tatTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCAt                                                                                                                                                  >  2:1457170/1‑149 (MQ=255)
tatTTACCCTTCGTGTAACCCACAGTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCAt                                                                                                                                                  <  1:1237723/149‑1 (MQ=255)
  tttACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGt                                                                                                                                                <  2:1791093/149‑1 (MQ=255)
  tttACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGt                                                                                                                                                >  2:3691783/1‑149 (MQ=255)
   ttACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGtt                                                                                                                                               <  1:3399570/149‑1 (MQ=255)
   ttACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGtt                                                                                                                                               <  1:3403201/149‑1 (MQ=255)
     aCCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGtttt                                                                                                                                             <  2:64255/149‑1 (MQ=255)
       ccTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTg                                                                                                                                           >  1:899158/1‑149 (MQ=255)
        cTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGc                                                                                                                                          >  1:1261396/1‑149 (MQ=255)
        cTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGc                                                                                                                                          >  1:789122/1‑149 (MQ=255)
            gtgtAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGt                                                                                                                                      <  2:3447612/149‑1 (MQ=255)
            gtgtAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGt                                                                                                                                      >  1:3901539/1‑149 (MQ=255)
               tAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACt                                                                                                                                   <  2:176178/149‑1 (MQ=255)
                aaCCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTg                                                                                                                                  >  1:82722/1‑149 (MQ=255)
                aaCCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTg                                                                                                                                  >  1:727578/1‑149 (MQ=255)
                 aCCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGa                                                                                                                                 >  1:2625154/1‑149 (MQ=255)
                  cccACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGAt                                                                                                                                <  2:3274347/149‑1 (MQ=255)
                     acaTTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATaaa                                                                                                                             >  1:953924/1‑149 (MQ=255)
                      caTTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAAt                                                                                                                            >  2:1479039/1‑149 (MQ=255)
                      caTTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAAt                                                                                                                            >  1:3565576/1‑149 (MQ=255)
                       aTTCCCTTTTTAAGCCAAAGACACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATa                                                                                                                           <  1:1492207/149‑1 (MQ=255)
                         tCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGt                                                                                                                         <  2:142464/149‑1 (MQ=255)
                          cccTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGtt                                                                                                                        >  2:1069064/1‑149 (MQ=255)
                          cccTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGtt                                                                                                                        >  2:1069135/1‑149 (MQ=255)
                          cccTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGtt                                                                                                                        <  1:1152973/149‑1 (MQ=255)
                           ccTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTc                                                                                                                       <  2:1726068/149‑1 (MQ=255)
                                   aGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATcc                                                                                                               >  1:2968265/1‑149 (MQ=255)
                                    gCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATccc                                                                                                              <  2:1554343/149‑1 (MQ=255)
                                     ccAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCa                                                                                                             <  1:2542792/149‑1 (MQ=255)
                                       aaaGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGt                                                                                                           >  1:21274/1‑149 (MQ=255)
                                          gAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGa                                                                                                        >  2:944631/1‑149 (MQ=255)
                                          gAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGa                                                                                                        <  1:4110500/149‑1 (MQ=255)
                                           caaCGCGTTTCTTCGTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCAGCGATAAATATCCTTCATACCATTATGGGTGATATTTCAGTCCATGTTTTTGCATGTACTGATAAATAGTTCGGTTATCCCAGTCGAt                                                                                                       <  2:3791033/148‑1 (MQ=255)
                                           aaaCGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGAt                                                                                                       >  1:2426305/1‑149 (MQ=255)
                                           aaaCGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGAt                                                                                                       <  1:1842976/149‑1 (MQ=255)
                                           aaaCGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGAt                                                                                                       <  2:865508/149‑1 (MQ=255)
                                            aaCGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATa                                                                                                      >  2:3796160/1‑149 (MQ=255)
                                                  tttCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgc                                                                                                <  2:736992/149‑1 (MQ=255)
                                                  tttCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgc                                                                                                >  2:4033160/1‑149 (MQ=255)
                                                  tttCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGgc                                                                                                >  1:2292876/1‑149 (MQ=255)
                                                     cttcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATACTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCTGTTATCCCAGTCGATAATCGgcagc                                                                                             >  2:2472717/1‑149 (MQ=255)
                                                       tcttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCAc                                                                                           >  1:1980615/1‑149 (MQ=255)
                                                         ttcCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACtt                                                                                         >  2:1240426/1‑149 (MQ=255)
                                                            cGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTaa                                                                                      >  2:2965242/1‑149 (MQ=255)
                                                            cGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTaa                                                                                      >  1:2576207/1‑149 (MQ=255)
                                                             gCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTaaa                                                                                     >  1:4055637/1‑149 (MQ=255)
                                                             gCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTaaa                                                                                     >  1:693712/1‑149 (MQ=255)
                                                              ccATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAAt                                                                                    <  1:2351328/149‑1 (MQ=255)
                                                               cATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATa                                                                                   >  1:3284203/1‑149 (MQ=255)
                                                                aTGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATAc                                                                                  >  1:4009773/1‑149 (MQ=255)
                                                                aTGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATAc                                                                                  <  2:789122/149‑1 (MQ=255)
                                                                       gTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGc                                                                           <  1:553082/149‑1 (MQ=255)
                                                                        ttCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCt                                                                          <  1:1615143/149‑1 (MQ=255)
                                                                           ccATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGaa                                                                       <  1:3469218/149‑1 (MQ=255)
                                                                           ccATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGaa                                                                       <  1:318492/149‑1 (MQ=255)
                                                                            cATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAAt                                                                      >  2:3595983/1‑149 (MQ=255)
                                                                            cATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAAt                                                                      >  1:300289/1‑149 (MQ=255)
                                                                            cATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAAt                                                                      <  2:2092856/149‑1 (MQ=255)
                                                                                tACGGGTTGTAGGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGcc                                                                  <  2:2681087/149‑1 (MQ=255)
                                                                                   gggTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGc                                                               >  2:4092526/1‑149 (MQ=255)
                                                                                   gggTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGc                                                               >  2:2890753/1‑149 (MQ=255)
                                                                                   gggTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGc                                                               >  2:427247/1‑149 (MQ=255)
                                                                                     gTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCAc                                                             <  1:796205/149‑1 (MQ=255)
                                                                                     gTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCAc                                                             <  1:3796160/149‑1 (MQ=255)
                                                                                            gggTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTaaa                                                      <  1:2930782/149‑1 (MQ=255)
                                                                                            gggTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTaaa                                                      >  2:1220705/1‑149 (MQ=255)
                                                                                            gggTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTaaa                                                      <  1:605872/149‑1 (MQ=255)
                                                                                             ggTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAAt                                                     <  2:3968826/149‑1 (MQ=255)
                                                                                             ggTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAAt                                                     <  2:1931888/149‑1 (MQ=255)
                                                                                                aTCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTgg                                                  <  2:2426305/149‑1 (MQ=255)
                                                                                                  cGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCa                                                <  1:2756526/149‑1 (MQ=255)
                                                                                                   gCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCAc                                               <  2:2009711/149‑1 (MQ=255)
                                                                                                     ccACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGa                                             >  1:1072622/1‑149 (MQ=255)
                                                                                                     ccACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGa                                             <  1:2389236/149‑1 (MQ=255)
                                                                                                          gATAAATATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGcc                                        <  2:3626609/149‑1 (MQ=255)
                                                                                                             aaaTATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGa                                     >  1:3693427/1‑149 (MQ=255)
                                                                                                              aaTATCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGAt                                    >  1:1404915/1‑149 (MQ=255)
                                                                                                               atatCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGAtt                                   <  2:2563446/149‑1 (MQ=255)
                                                                                                                tatCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTg                                  >  2:3341506/1‑149 (MQ=255)
                                                                                                                tatCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTg                                  >  1:2493570/1‑149 (MQ=255)
                                                                                                                  tCCTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGtt                                >  1:3592721/1‑149 (MQ=255)
                                                                                                                   ccTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTc                               <  1:450222/149‑1 (MQ=255)
                                                                                                                   ccTTCATCCCATAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTc                               <  1:1092863/149‑1 (MQ=255)
                                                                                                                           ccATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCa                       >  1:1445183/1‑149 (MQ=255)
                                                                                                                              tAATGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGc                    >  2:523927/1‑149 (MQ=255)
                                                                                                                                aTGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCa                  <  2:82710/149‑1 (MQ=255)
                                                                                                                                 tGGGTGATATTTCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAg                 >  1:1249146/1‑149 (MQ=255)
                                                                                                                                    gTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCaa              >  2:3741018/1‑149 (MQ=255)
                                                                                                                                         atTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAg         >  2:2577364/1‑149 (MQ=255)
                                                                                                                                          tttCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAgg        >  2:4048046/1‑149 (MQ=255)
                                                                                                                                          tttCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAgg        >  2:279508/1‑149 (MQ=255)
                                                                                                                                          tttCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAgg        >  2:2066136/1‑149 (MQ=255)
                                                                                                                                           ttCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGt       >  2:3231462/1‑149 (MQ=255)
                                                                                                                                           ttCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGt       <  1:3090570/149‑1 (MQ=255)
                                                                                                                                            tCAGTCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGtt      <  2:3086871/149‑1 (MQ=255)
                                                                                                                                            tCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGtt      <  1:3843419/149‑1 (MQ=255)
                                                                                                                                             cAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGttt     <  1:1857250/149‑1 (MQ=255)
                                                                                                                                             cAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATAGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGttt     >  1:251218/1‑149 (MQ=255)
                                                                                                                                               ggCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTgc   >  2:1323343/1‑149 (MQ=255)
                                                                                                                                                gCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTgcg  >  2:1558616/1‑149 (MQ=255)
                                                                                                                                                |                                                                                                                                                    
TATTTACCCTTCGTGTAACCCACATTCCCTTTTTAAGCCAAAGAAACGCGTTTCTTCTTCCGCCATGCCGGGTTCCCATTTACGGGTTGTATGGGTATCGCCCACCGATAAATATCCTTCATCCCATAATGGGTGATATTTCAGGCCATGTTTTTGCAGGTACTGATAAATAGTTCGGTTATCCCAGTCGATAATCGGCAGCACTTTAAATACGCCACGCTGAATTGCCAGCACCGGTAAATTGGCACGACTGCCGGATTGTTCACGGCGCAGGCCAGCAAACCAGGTTTGCG  >  CP009273/2880934‑2881226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: