Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,959,004 G→A 100% I131I (ATC→ATT)  lgt ← phosphatidylglycerol‑prolipoprotein diacylglyceryl transferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,959,0040GA100.0% 682.5 / NA 206I131I (ATC→ATT) lgtphosphatidylglycerol‑prolipoprotein diacylglyceryl transferase
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base A (90/116);  total (90/116)
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 206 total aligned reads displayed.

TTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGC  >  CP009273/2958858‑2959148
                                                                                                                                                  |                                                                                                                                                
ttggttTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAAt                                                                                                                                                <  2:3064207/149‑1 (MQ=255)
ttggttTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAAt                                                                                                                                                >  1:1800706/1‑149 (MQ=255)
ttggttTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAAt                                                                                                                                                <  1:77300/149‑1 (MQ=255)
ttggttTGCAGCAGCAAAATATCGTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAAt                                                                                                                                                <  2:990361/149‑1 (MQ=255)
 tggttTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATa                                                                                                                                               <  1:2814302/149‑1 (MQ=255)
  ggttTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATaa                                                                                                                                              >  2:2897818/1‑149 (MQ=255)
   gttTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATaaa                                                                                                                                             >  1:637014/1‑149 (MQ=255)
    tttGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATaaaa                                                                                                                                            >  1:2675344/1‑149 (MQ=255)
    tttGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATaaaa                                                                                                                                            <  1:1223449/149‑1 (MQ=255)
          gcagcaAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCagag                                                                                                                                      >  2:2590761/1‑149 (MQ=255)
            agcaAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGAc                                                                                                                                    <  2:1082123/149‑1 (MQ=255)
            agcaAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGAc                                                                                                                                    <  1:2247526/149‑1 (MQ=255)
             gcaAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGAcc                                                                                                                                   <  1:3938879/149‑1 (MQ=255)
                aaaTATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTgg                                                                                                                                >  1:493056/1‑149 (MQ=255)
                  atatCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGgaa                                                                                                                              <  1:215925/149‑1 (MQ=255)
                  atatCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGgaa                                                                                                                              <  2:398705/149‑1 (MQ=255)
                  atatCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGgaa                                                                                                                              >  2:459300/1‑149 (MQ=255)
                     tcttctGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGgaagaa                                                                                                                           >  1:1249656/1‑149 (MQ=255)
                     tcttctGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGgaagaa                                                                                                                           >  1:2512676/1‑149 (MQ=255)
                      cttctGTACGGGAGCCAGGGAACAGCATGGCAAACGGGTAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGaagaag                                                                                                                          <  2:4036988/149‑1 (MQ=255)
                      cttctGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAAGACACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGaagaag                                                                                                                          <  2:995732/149‑1 (MQ=255)
                         ctGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGaa                                                                                                                       <  1:3350203/149‑1 (MQ=255)
                          tGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAAc                                                                                                                      >  1:297920/1‑149 (MQ=255)
                           gTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGACTGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACg                                                                                                                     >  2:3818296/1‑149 (MQ=255)
                             aCGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGtt                                                                                                                   <  1:1785535/149‑1 (MQ=255)
                              cGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGttt                                                                                                                  <  2:1813378/149‑1 (MQ=255)
                              cGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGttt                                                                                                                  <  1:1169003/149‑1 (MQ=255)
                                 gAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGt                                                                                                               >  1:1934194/1‑149 (MQ=255)
                                  aGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTa                                                                                                              <  1:2378303/149‑1 (MQ=255)
                                   gCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTAc                                                                                                             >  1:1288425/1‑149 (MQ=255)
                                   gCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTAc                                                                                                             <  2:2683336/149‑1 (MQ=255)
                                      aGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTAcggc                                                                                                          <  1:1462447/149‑1 (MQ=255)
                                       gggAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCTAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTAcggcg                                                                                                         >  2:239313/1‑149 (MQ=255)
                                       gggAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTAcggcg                                                                                                         <  2:1200621/149‑1 (MQ=255)
                                         gAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACggcggg                                                                                                       <  1:3669319/149‑1 (MQ=255)
                                         gAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACggcggg                                                                                                       <  1:3690604/149‑1 (MQ=255)
                                          aaCAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGACGGAACGTTTAGTACggcgggc                                                                                                      >  1:3971109/1‑149 (MQ=255)
                                           aCAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACggcgggcg                                                                                                     >  2:3552249/1‑149 (MQ=255)
                                             aGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGaa                                                                                                   >  2:327858/1‑149 (MQ=255)
                                              gCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAg                                                                                                  >  1:3421719/1‑149 (MQ=255)
                                               cATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGa                                                                                                 <  1:1114483/149‑1 (MQ=255)
                                               cATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGa                                                                                                 <  2:804303/149‑1 (MQ=255)
                                               cATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGa                                                                                                 <  2:1634763/149‑1 (MQ=255)
                                                aTGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGAt                                                                                                <  2:2020683/149‑1 (MQ=255)
                                                 tGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATa                                                                                               >  1:4064653/1‑149 (MQ=255)
                                                 tGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATa                                                                                               >  2:171771/1‑149 (MQ=255)
                                                  ggCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATaa                                                                                              >  2:2610365/1‑149 (MQ=255)
                                                    cAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAatc                                                                                            <  1:3257689/149‑1 (MQ=255)
                                                     aaaCGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAatca                                                                                           <  2:2512676/149‑1 (MQ=255)
                                                     aaaCGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAatca                                                                                           >  1:3234225/1‑149 (MQ=255)
                                                         gggAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATcac                                                                                       <  1:3736206/149‑1 (MQ=255)
                                                          ggAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATcacc                                                                                      <  1:615829/149‑1 (MQ=255)
                                                          ggAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTGGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAACTCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATcacc                                                                                      <  1:1494228/149‑1 (MQ=255)
                                                            aaGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATcaccac                                                                                    <  2:2045716/149‑1 (MQ=255)
                                                            aaGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATcaccac                                                                                    >  1:540969/1‑149 (MQ=255)
                                                            aaGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATcaccac                                                                                    >  1:1887348/1‑149 (MQ=255)
                                                              gTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGa                                                                                  <  2:2435361/149‑1 (MQ=255)
                                                              gTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGa                                                                                  <  2:1151928/149‑1 (MQ=255)
                                                               ttCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGAt                                                                                 <  1:1173564/149‑1 (MQ=255)
                                                               ttCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGAt                                                                                 <  2:3422550/149‑1 (MQ=255)
                                                                  gggTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAAc                                                                              <  2:2195594/149‑1 (MQ=255)
                                                                  gggTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAAc                                                                              <  1:3045134/149‑1 (MQ=255)
                                                                     tCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGcc                                                                           >  1:2921606/1‑149 (MQ=255)
                                                                        aCGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAAt                                                                        >  2:2417523/1‑149 (MQ=255)
                                                                         cgcgGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATc                                                                       <  2:3943804/149‑1 (MQ=255)
                                                                                ccACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGgccgc                                                                >  2:3803500/1‑149 (MQ=255)
                                                                                ccACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGgccgc                                                                <  1:2349544/149‑1 (MQ=255)
                                                                                  acaATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGccgccg                                                              >  2:659236/1‑149 (MQ=255)
                                                                                    aaTTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTg                                                            <  1:1329639/149‑1 (MQ=255)
                                                                                    aaTTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTg                                                            <  1:3191389/149‑1 (MQ=255)
                                                                                    aaTTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTg                                                            <  1:3110375/149‑1 (MQ=255)
                                                                                    aaTTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTg                                                            <  2:536476/149‑1 (MQ=255)
                                                                                      ttCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGa                                                          >  1:4021075/1‑149 (MQ=255)
                                                                                      ttCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTAAGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGa                                                          >  1:3929349/1‑149 (MQ=255)
                                                                                       tCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGaa                                                         >  1:2998957/1‑149 (MQ=255)
                                                                                        cACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGaaa                                                        >  2:2289582/1‑149 (MQ=255)
                                                                                         aCCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAg                                                       >  1:1026415/1‑149 (MQ=255)
                                                                                          ccGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGa                                                      <  2:3183311/149‑1 (MQ=255)
                                                                                          ccGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGa                                                      >  1:3823554/1‑149 (MQ=255)
                                                                                           cGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGAc                                                     >  2:2928159/1‑149 (MQ=255)
                                                                                              taataaAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATg                                                  <  1:3514149/149‑1 (MQ=255)
                                                                                               aataaAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCTAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATgc                                                 <  1:512344/149‑1 (MQ=255)
                                                                                                ataaAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATgcc                                                >  1:291866/1‑149 (MQ=255)
                                                                                                     gTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGt                                           <  2:758720/149‑1 (MQ=255)
                                                                                                     gTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGt                                           >  2:1927862/1‑149 (MQ=255)
                                                                                                             gACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGaca                                   >  2:2233396/1‑149 (MQ=255)
                                                                                                                     gCACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAg                           >  1:1899524/1‑149 (MQ=255)
                                                                                                                      cACCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGTTAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGa                          <  1:3733594/149‑1 (MQ=255)
                                                                                                                       aCCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGAt                         <  2:3017596/149‑1 (MQ=255)
                                                                                                                       aCCAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGAt                         <  1:2745299/149‑1 (MQ=255)
                                                                                                                        ccAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATa                        <  1:1059868/149‑1 (MQ=255)
                                                                                                                         cAAGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATAc                       <  1:3980636/149‑1 (MQ=255)
                                                                                                                           aGACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAg                     >  2:897271/1‑149 (MQ=255)
                                                                                                                            gACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGc                    <  2:371629/149‑1 (MQ=255)
                                                                                                                            gACCAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGc                    >  1:3389218/1‑149 (MQ=255)
                                                                                                                               cAAACGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGa                 <  1:2424929/149‑1 (MQ=255)
                                                                                                                                 aaCGGAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGAAACAGCGGATc               >  2:306192/1‑149 (MQ=255)
                                                                                                                                     gAATGAGTGGTGCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGcc           <  2:279401/149‑1 (MQ=255)
                                                                                                                                            tggtgCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACt    <  1:3552249/149‑1 (MQ=255)
                                                                                                                                              gtgCAATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGTCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCTGATCGGCCATAAACTGc  <  2:3105154/149‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                
TTGGTTTGCAGCAGCAAAATATCTTCTGTACGGGAGCCAGGGAACAGCATGGCAAACGGGAAGTTCGGGTCAACGCGGCCCCACAATTCACCGTTAATAAAGTTGCCCAGACGCCCGGCACCAAGACCAAACGGAATGAGTGGTGCGATAAAATCAGAGACCTGGAAGAAGGAACGTTTAGTACGGCGGGCGAAGATAATCATCACCACGATAACGCCAATCAGGCCGCCGTGGAAAGACATGCCGCCGTCCCAGACACGGAACAGATACAGCGGATCGGCCATAAACTGC  >  CP009273/2958858‑2959148

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑