| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,022,562 | C→T | 100% | G577R (GGA→AGA) | ygfT ← | putative oxidoreductase, Fe‑S subunit/nucleotide‑binding subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,022,562 | 0 | C | T | 99.1% | 774.9 / ‑2.4 | 232 | G577R (GGA→AGA) | ygfT | putative oxidoreductase, Fe‑S subunit/nucleotide‑binding subunit |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base T (124/106); total (125/107) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 232 total aligned reads displayed.
CTGCCTTCCTGCGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCCGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAATC > CP009273/3022416‑3022707 | ttCCTGCGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCCGCTGccc < 1:1939621/149‑1 (MQ=255) gCGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCaa < 1:3158845/149‑1 (MQ=255) ccATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCAc > 1:1152200/1‑149 (MQ=255) ccATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCAc > 1:3980881/1‑149 (MQ=255) tGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACggca < 1:2198543/149‑1 (MQ=255) gCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACggcat < 2:2487163/149‑1 (MQ=255) cAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACggcatg < 1:3205833/149‑1 (MQ=255) gACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACggcatggcat < 1:867239/149‑1 (MQ=255) cAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATgc < 2:3279373/149‑1 (MQ=255) aGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTg > 2:1900211/1‑149 (MQ=255) aGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTg > 2:1392577/1‑149 (MQ=255) aTCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGa > 1:2587631/1‑149 (MQ=255) aTCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGa > 1:3614134/1‑149 (MQ=255) aTCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGa > 2:1620754/1‑149 (MQ=255) cgcgCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAAc < 2:2332303/149‑1 (MQ=255) gcCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCaa < 1:3318790/149‑1 (MQ=255) ccATGAACTGCATCACCACAAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCaaa < 2:2552728/149‑1 (MQ=255) cATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAg > 1:2519412/1‑149 (MQ=255) aTGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAgg < 2:1321368/149‑1 (MQ=255) tGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAACGGc > 2:2662823/1‑149 (MQ=255) gAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGcc > 1:843031/1‑149 (MQ=255) gAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGcc < 2:1162587/149‑1 (MQ=255) tGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATaa > 2:1519463/1‑149 (MQ=255) cATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATc > 1:1647708/1‑149 (MQ=255) aTCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCACAGGCCATAATCa > 1:3921328/1‑149 (MQ=255) tCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAg > 1:1468362/1‑149 (MQ=255) accaGCAAAGACTTTTGTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACAt < 2:3085972/149‑1 (MQ=255) ccaGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATc < 1:1969502/149‑1 (MQ=255) ccaGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATc < 2:3021124/149‑1 (MQ=255) ccaGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATc > 1:3842810/1‑149 (MQ=255) ccaGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATc < 1:1969905/149‑1 (MQ=255) caGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGACCATcg > 1:2430220/1‑149 (MQ=255) aGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGATTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATcgg < 2:1588744/149‑1 (MQ=255) gCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATcggc > 1:2868735/1‑149 (MQ=255) gACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCa > 2:2812649/1‑149 (MQ=255) gACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCa > 1:3495442/1‑149 (MQ=255) aCTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCaa < 2:2599494/149‑1 (MQ=255) cTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAAt > 1:1059548/1‑149 (MQ=255) ttttCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCa > 2:3664587/1‑149 (MQ=255) tCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAAc > 2:1050756/1‑149 (MQ=255) tCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAAc < 2:1256773/149‑1 (MQ=255) tCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAAc < 1:2952742/149‑1 (MQ=255) tCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAAc < 2:3785408/149‑1 (MQ=255) aGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAActc > 2:3070518/1‑149 (MQ=255) gATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAActct > 1:3651735/1‑149 (MQ=255) tGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCCAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGa > 1:3932827/1‑149 (MQ=255) gCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGaa > 1:3431561/1‑149 (MQ=255) tGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGc < 1:3609964/149‑1 (MQ=255) gggTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCt < 1:422705/149‑1 (MQ=255) gggTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCt > 2:170034/1‑149 (MQ=255) taggtaAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCACAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTAcc > 2:1940973/1‑149 (MQ=255) ggtaAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCgg > 1:1293619/1‑149 (MQ=255) taAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggac < 2:3328725/149‑1 (MQ=255) aaaTACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacg > 1:3229581/1‑149 (MQ=255) aagaCCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacga < 1:772263/146‑1 (MQ=255) aaTACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacga > 2:238071/1‑149 (MQ=255) aaTACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAAGTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacga < 2:3575421/149‑1 (MQ=255) aTACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacgag < 2:711641/149‑1 (MQ=255) cccTACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacgaggac > 1:4096262/1‑149 (MQ=255) cccGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacgaggac < 1:1392577/149‑1 (MQ=255) ccGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTCCCggacgaggacg > 2:2183621/1‑149 (MQ=255) cGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCggacgaggacga < 1:2692951/149‑1 (MQ=255) gACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGgacgac < 1:3969885/149‑1 (MQ=255) aCGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGacgacg > 2:1994799/1‑149 (MQ=255) aCCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGAc < 1:2470951/149‑1 (MQ=255) ggTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCAt < 2:282177/149‑1 (MQ=255) gTTTGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATc > 1:501534/1‑149 (MQ=255) tttGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATcc > 2:1534070/1‑149 (MQ=255) tttGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATcc > 1:1291255/1‑149 (MQ=255) tttGAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATcc < 1:1031821/149‑1 (MQ=255) gAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGc > 1:787579/1‑149 (MQ=255) gAATCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGc > 1:3746129/1‑149 (MQ=255) aaTCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGcc > 2:3235684/1‑149 (MQ=255) aaTCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGcc > 1:3775717/1‑149 (MQ=255) aTCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGccc > 2:2271419/1‑149 (MQ=255) tCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGcccc < 2:3974470/149‑1 (MQ=255) tCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGcccc < 1:2534427/149‑1 (MQ=255) tCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGcccc > 1:46721/1‑149 (MQ=255) tCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGcccc < 2:782060/149‑1 (MQ=255) tCAGGCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGcccc > 1:3498809/1‑149 (MQ=255) ggCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGc > 2:679231/1‑149 (MQ=255) gCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCt > 2:1850264/1‑149 (MQ=255) gCCCCATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCt > 2:1850360/1‑149 (MQ=255) cccATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCa < 2:2068735/149‑1 (MQ=255) cATTTATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCAcc < 2:3493797/149‑1 (MQ=255) tttATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCa > 2:1892768/1‑149 (MQ=255) ttATCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCAt < 2:439118/149‑1 (MQ=255) aTCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATgg > 1:2765366/1‑149 (MQ=255) aTCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATgg > 1:430917/1‑149 (MQ=255) aTCGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATgg > 1:700259/1‑149 (MQ=255) cGAGTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCg < 1:618706/149‑1 (MQ=255) gTTTAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTa < 1:2051556/149‑1 (MQ=255) tttAATTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTAc < 2:843031/149‑1 (MQ=255) aaTTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGaa < 1:2924047/149‑1 (MQ=255) aTTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAAt < 2:4105242/149‑1 (MQ=255) aTTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAAt < 2:3431561/149‑1 (MQ=255) aTTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAAt > 1:1243344/1‑149 (MQ=255) aTTCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAAt < 1:803832/149‑1 (MQ=255) ttCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAATc < 2:3925584/149‑1 (MQ=255) ttCTGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAATc < 1:1308843/149‑1 (MQ=255) | CTGCCTTCCTGCGGCCATTGCAGTGACAACCAGATCCGCGCCATGAACTGCATCACCACCAGCAAAGACTTTTTTCAGATGCGTCTGGGTAGGTAAATACCCGACGTCACCGGTTTGAATCAGGCCCCATTTATCGAGTTTAATTCCGCTGCCCTGCAACCACGGCATGGCATGCGCCTGGAAACCAAAGGCCATAATCAGAACATCGGCGGGCAATTCAAACTCTGAACCCGCTACCGGACGAGGACGACGGCGACCATCCGGCCCCGGCTCACCCATGGCGGTACGAATC > CP009273/3022416‑3022707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |