| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,262,740 | T→A | 46.4% | Y323N (TAT→AAT) | yhaC → | pentapetide repeats‑related protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,262,740 | 0 | T | A | 46.4% | 62.4 / inf | 222 | Y323N (TAT→AAT) | yhaC | pentapetide repeats‑related protein |
| Reads supporting (aligned to +/- strand): ref base T (73/46); new base A (55/48); total (128/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 227 total aligned reads displayed.
AACAAAAGAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAACACATATGAAGC > CP009273/3262592‑3262888 | aaaaGAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATc < 1:2888061/149‑1 (MQ=255) aaaaGAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATc > 1:2940432/1‑149 (MQ=255) aaaGAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCt > 1:108536/1‑149 (MQ=255) aaaGAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCt < 1:3131483/149‑1 (MQ=255) aataaaTATATAAAATCTCATCTAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTg < 2:3482236/146‑1 (MQ=255) ataaaTATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTgg < 2:3427766/147‑1 (MQ=255) gAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGgt > 1:1035355/1‑149 (MQ=255) gAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGgt > 2:1333182/1‑149 (MQ=255) gAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGgt < 1:1262034/149‑1 (MQ=255) atatatAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGgtcgt > 1:1876821/1‑149 (MQ=255) atataAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTcc > 1:619919/1‑149 (MQ=255) atataAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTcc > 2:1461867/1‑149 (MQ=255) ataAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTcccc < 1:3624430/149‑1 (MQ=255) taAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTccccc > 2:1187664/1‑149 (MQ=255) aaaGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCaa > 1:2406070/1‑149 (MQ=255) aaaGCTCATCGAAAATCATCAATTGCTTGAAAAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATATGGTCGTCCCCCac > 2:3931179/1‑148 (MQ=255) aaGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCaaa > 2:3582865/1‑149 (MQ=255) tCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAattaatta > 1:1364802/1‑149 (MQ=255) aaaaTCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATAc > 2:2817944/1‑149 (MQ=255) aaaaTCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATAc > 1:2207417/1‑149 (MQ=255) catcaATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATgg < 2:3054961/149‑1 (MQ=255) catcaATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATgg < 1:1860355/149‑1 (MQ=255) aaTTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGAttt > 1:229051/1‑149 (MQ=255) ttGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTaa < 1:967414/149‑1 (MQ=255) cTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACa < 1:2428807/149‑1 (MQ=255) aaCAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATaga > 2:1162990/1‑149 (MQ=255) aaCAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATaga < 2:2716127/149‑1 (MQ=255) aaCAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATaga > 1:1792425/1‑149 (MQ=255) aGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGTTCGTCCCCCAAATTAATTATACTATGGATTTAAACATagaaga > 2:2400116/1‑149 (MQ=255) aGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATagaaga > 2:65918/1‑149 (MQ=255) gAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGAc > 1:2178393/1‑149 (MQ=255) ttaaattaaCAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGActct < 2:3097333/149‑1 (MQ=255) taaattaaCATATATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTa < 2:1850106/149‑1 (MQ=255) taaattaaCAGAGATCAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTa < 1:3606121/149‑1 (MQ=255) aaattaaCAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAg > 1:3446006/1‑149 (MQ=255) taaCAGAGATGAAAGAATTCTAATAATAAAAAATATATTATTACATCTATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCa < 1:764220/149‑1 (MQ=255) cAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCagaa > 2:3336786/1‑149 (MQ=255) agagATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCagaag > 2:362259/1‑149 (MQ=255) agaTGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAagag > 1:905754/1‑149 (MQ=255) gaTGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGt < 2:3692101/149‑1 (MQ=255) gaTGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGt > 2:426035/1‑149 (MQ=255) tGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTa < 2:4028566/149‑1 (MQ=255) tGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTa < 1:3602499/149‑1 (MQ=255) tGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTa > 2:786758/1‑149 (MQ=255) aaaGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACt > 2:1436737/1‑149 (MQ=255) ttCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGa > 2:2266587/1‑149 (MQ=255) ttCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGa > 1:1347256/1‑149 (MQ=255) tctcAACAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGat < 1:482255/149‑1 (MQ=255) ctcATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGata < 1:1689987/149‑1 (MQ=255) tcatcaGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGataa > 2:3740067/1‑149 (MQ=255) catcatAAAAAATATATTATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGataat < 2:3560118/149‑1 (MQ=255) catcaGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGataat < 2:1749438/149‑1 (MQ=255) tcaGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATAc > 2:1841296/1‑149 (MQ=255) gAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCt > 1:3264019/1‑149 (MQ=255) gAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCt < 2:2438790/149‑1 (MQ=255) aaaaTATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCga > 2:539809/1‑149 (MQ=255) atGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGAc < 1:3740067/149‑1 (MQ=255) gATTACATCGATATAATCATTGAAGATTATTAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGa < 2:4105313/149‑1 (MQ=255) gATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGa < 2:1677025/149‑1 (MQ=255) aTTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGaa < 2:1707059/149‑1 (MQ=255) aTTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGaa > 2:3043678/1‑149 (MQ=255) ttACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATAGCCTCGAGAAAGACGaaa > 2:2613772/1‑149 (MQ=255) tACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGaaaa < 2:1964234/149‑1 (MQ=255) aTCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATtc > 2:2783686/1‑149 (MQ=255) tCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATtct > 1:606570/1‑149 (MQ=255) tCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATtct > 2:3421151/1‑149 (MQ=255) cGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATtctc < 2:1124637/149‑1 (MQ=255) gATATAATCATTGAAGAATATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTcc > 2:2863383/1‑149 (MQ=255) ataATCATTGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGa > 1:1211507/1‑149 (MQ=255) aaTCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACa > 1:3202745/1‑149 (MQ=255) aaTCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACa > 1:2751791/1‑149 (MQ=255) ttGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGc < 2:3465439/149‑1 (MQ=255) tGAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCt < 1:858652/149‑1 (MQ=255) gAAGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCtt > 2:85275/1‑149 (MQ=255) aaGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCttt > 1:3507517/1‑149 (MQ=255) aaGATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCttt > 1:1577381/1‑149 (MQ=255) gATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAATTTAATTATAATATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGa < 1:1461867/149‑1 (MQ=255) gATTATGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGa > 2:439483/1‑149 (MQ=255) tATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGt > 1:3033536/1‑149 (MQ=255) aTGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTc < 2:2940432/149‑1 (MQ=255) aTGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTc > 1:1965282/1‑149 (MQ=255) aTGAAAATACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTc > 1:3475918/1‑149 (MQ=255) tGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCg > 1:1500283/1‑149 (MQ=255) tGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTGTGAGGTCg > 1:1193511/1‑149 (MQ=255) aaaaTACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCggg < 2:1517476/149‑1 (MQ=255) aaaaTACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCggg > 1:1247654/1‑149 (MQ=255) aaaaTACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCggg > 1:3958174/1‑149 (MQ=255) aaaTACCAAAGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCATAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCgggg > 1:3928235/1‑149 (MQ=255) aaTACCAAAGATAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGa < 2:3240401/149‑1 (MQ=255) aTACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGaa > 2:2826949/1‑149 (MQ=255) cAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACACTGGCTTTGAGGTCGGGGAAtata > 2:2702789/1‑149 (MQ=255) cAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTATCCGGACAATGGCTTTGAGGTCGGGGAAtata < 1:202610/149‑1 (MQ=255) aGAAAATGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAaca < 2:3479861/149‑1 (MQ=255) aaaaTGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAAcaca < 1:2318720/149‑1 (MQ=255) aaaaGGCTAATCTGGTCGTCCCCAAAATTAATTATACTATGTATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAAcaca < 1:1746464/149‑1 (MQ=255) aaaTGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAACACat > 2:710025/1‑149 (MQ=255) aaTGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAACACata > 2:2363733/1‑149 (MQ=255) aaTGCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAACACata < 1:1636459/149‑1 (MQ=255) gCTAATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAACACATATGa < 1:2473714/149‑1 (MQ=255) tATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAACACATATGAAGc > 2:1829821/1‑149 (MQ=255) | AACAAAAGAAATATATAAAAGCTCATCGAAAATCATCAATTGCTTGAACAGAATTAAATTAACAGAGATGAAAGAATTCTCATCAGAAAAAATATATGATTACATCGATATAATCATTGAAGATTATGAAAATACCAAAGAAAATGCTTATCTGGTCGTCCCCCAAATTAATTATACTATGGATTTAAACATAGAAGACTCTAGCTCAGAAGAGTTACTTTCAGATAATACCCTCGAGAAAGACGAAAATTCTCCGGACAATGGCTTTGAGGTCGGGGAATATAACACATATGAAGC > CP009273/3262592‑3262888 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |