| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,299,240 | A→C | 100% | intergenic (‑64/+90) | mtr ← / ← deaD | tryptophan transporter of high affinity/ATP‑dependent RNA helicase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,299,240 | 0 | A | C | 98.7% | 923.1 / ‑2.1 | 230 | intergenic (‑64/+90) | mtr/deaD | tryptophan transporter of high affinity/ATP‑dependent RNA helicase |
| Reads supporting (aligned to +/- strand): ref base A (1/2); new base C (100/127); total (101/129) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.59e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 230 total aligned reads displayed.
CTGCGCCAATAATGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGC > CP009273/3299095‑3299385 | cTGCGCCAATAATGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGa > 1:3714530/1‑149 (MQ=255)cTGCGCCAATAATGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGa > 1:1670675/1‑149 (MQ=255) gcgcCAATAATGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGt > 1:3135993/1‑149 (MQ=255) aataatGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACaaa > 1:1431714/1‑149 (MQ=255) taatGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAg < 2:2782548/149‑1 (MQ=255) taatGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTATCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAg > 2:1991492/1‑149 (MQ=255) atGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGAc < 2:2239701/149‑1 (MQ=255) tGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACa < 1:3961593/149‑1 (MQ=255) tGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGaa < 2:1106857/149‑1 (MQ=255) gccgccGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGaaa < 2:2485694/149‑1 (MQ=255) ccgccgATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGaaaa < 1:1610461/149‑1 (MQ=255) ccgATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGaaaaaaa < 2:2858054/149‑1 (MQ=255) ccgATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGaaaaaaa < 2:2613315/149‑1 (MQ=255) ccgATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGaaaaaaa < 1:987519/149‑1 (MQ=255) ccgATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGaaaaaaa < 2:1730645/149‑1 (MQ=255) cgATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAg < 2:1321726/149‑1 (MQ=255) cgATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAg < 1:1672583/149‑1 (MQ=255) aTAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGcc > 2:3474915/1‑149 (MQ=255) aTAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGcc < 1:3774512/149‑1 (MQ=255) aTAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGcc > 2:1441535/1‑149 (MQ=255) tAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGccc < 1:850927/149‑1 (MQ=255) tAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGccc < 2:1905326/149‑1 (MQ=255) aTCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCg > 1:1018300/1‑149 (MQ=255) tCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGa > 2:1976074/1‑149 (MQ=255) ccacGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATgg < 2:3683294/149‑1 (MQ=255) cgccgcCATGCTGCGTGGGTGAGGTTTGGGTGGTGGTTAGTGTTGCCTTGAGGGCTTCTCTCCAGTGAAAAATTGTGCTAGTGGGTTTTTTTGCTTTGCACTGTACCAGTACCCGTTTAAAAAAGACAGAAAAAAAGCCCCGATGGTaa < 1:2559669/149‑1 (MQ=255) cgccgcCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTaa > 2:211304/1‑149 (MQ=255) cgccgcCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTaa > 2:2661024/1‑149 (MQ=255) cgccgcCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTaa > 2:2661475/1‑149 (MQ=255) cgccgcCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTaa < 2:3247838/149‑1 (MQ=255) ccgccAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTaaaa > 2:685524/1‑149 (MQ=255) cgccAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTTTTATGCATGGCACTGTACCAGTACCCGAGTAAAAAAGACAGAAAAAAAGCCCCGATGGTaaaaa < 2:1852090/149‑1 (MQ=255) cAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTCAAAATCg > 1:3236687/1‑149 (MQ=255) aaGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGACAAAAAGCCCCGATGGTAAAAATCgg > 1:2308474/1‑149 (MQ=255) agcagcGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCggg < 1:284980/149‑1 (MQ=255) agcagcGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCggg < 2:861398/149‑1 (MQ=255) gcagcGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCgggg > 1:2233898/1‑149 (MQ=255) gagggTGACGTTTGGGTGGTGTTTAGTGTTGCCATGAGGGATGCTCTCCAGTGAAAAATAGTGCGACTGGGTTGTTTTGCATTGCACTGTCCCAGTACCCGATTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGta < 2:1055553/146‑1 (MQ=255) agggTGAGGTTTGGGTGGTGGTTTGTGTGGCAATGCGGGATTCACTCATGTGAAAAATTGTGCGACTGCTTTTTTATGCATTGCACTGTACCAGTACCCGATTACAAAAGCCAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGtat < 1:4020230/147‑1 (MQ=255) cGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGtata < 2:1374870/149‑1 (MQ=255) gTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGtatata > 1:3285224/1‑149 (MQ=255) gTGACGTTTGGGTGGTGGTTAGTGTTGCAATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCTTTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGtatata < 1:1040581/149‑1 (MQ=255) tGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTatatat > 1:2971198/1‑149 (MQ=255) tGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTatatat > 1:1899908/1‑149 (MQ=255) gagttttGGGTGGTGTTTTTTGTTGCCATGTGGGCTTCTCTCCATTTAAAATTTGTGCGACTGGTTTTTTATGCATGGAAGTGTACCAGTACCCTAGAAAAAAACACACAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATAtatt < 1:1186849/145‑1 (MQ=255) gACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATAtatt < 2:4063213/149‑1 (MQ=255) gACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATAtatt > 2:3378560/1‑149 (MQ=255) gACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATAtatt < 2:4062326/149‑1 (MQ=255) aCGTTTGGGTGGTGGTTAGTGTTGCCATGTGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTTTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATAtatta < 2:1907468/149‑1 (MQ=255) aCGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTTTGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATAtatta < 1:1388624/149‑1 (MQ=255) cGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATAtattat < 2:227560/149‑1 (MQ=255) gTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATattatt < 2:2790598/149‑1 (MQ=255) gTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATattatt < 2:429653/149‑1 (MQ=255) tttGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTAttt > 1:2611047/1‑149 (MQ=255) ttGGGTGGTGTTTAGTGTTGCCATGAGGGCTTCTCTCCATTGAAAATTAGTGCGACTGCTTTGTTATGCATTGCACTGTACCAGTACCCGAGTAAAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTAtttt < 2:2589061/149‑1 (MQ=255) tGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTa < 2:2944086/149‑1 (MQ=255) gggTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTTTGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTAc < 2:939486/149‑1 (MQ=255) gggTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTAc > 2:3144095/1‑149 (MQ=255) ggtggtggtTAGTGTGGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATGGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACa < 1:3080710/149‑1 (MQ=255) gtggtggtTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTCTATATTATTTTACAg > 2:2923055/1‑149 (MQ=255) gtggtggtTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAg > 2:2922834/1‑149 (MQ=255) tggcggtTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGa > 2:639995/1‑149 (MQ=255) ggtggtTTGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGAt < 2:2134931/149‑1 (MQ=255) ggtggtTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGAt > 1:1985024/1‑149 (MQ=255) ggtggtTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGAt > 2:296621/1‑149 (MQ=255) tggtTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATtg < 2:3281067/149‑1 (MQ=255) ttAGTGTTGCCATGAGGGCTTCTCTACAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTAAAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTgtgt < 2:1980844/149‑1 (MQ=255) ttgtgtTGCCATGAGGGCTTCTCTCCAGTTAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGtt < 1:3052239/147‑1 (MQ=255) tgtTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGATTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGc < 1:2718780/149‑1 (MQ=255) ttGCCATGAGGGCTTCTCTCCAGTTAAAAATAGTGCGACTGCGTTGTTATGAATGGCACTGTACCAGTACCCGAGTACAAAACACACAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTg < 1:1510902/149‑1 (MQ=255) cccATGCGGGCTCCCCTCCTGTTAAAAATCGGGCGACTGGGTTTTTATCCATTCCACTGACCCAGCACCCTAGAAAAAACCACACAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGtt < 1:724169/148‑1 (MQ=255) cATGAGGGCTTATCTCCAGTGAAAAATTGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTCCCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCa < 2:1220852/149‑1 (MQ=255) aTGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAg > 2:2707813/1‑149 (MQ=255) tGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGc < 2:1883511/149‑1 (MQ=255) gggCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCgat < 2:3022840/149‑1 (MQ=255) gggCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAACACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCgat < 2:912842/149‑1 (MQ=255) tctctcCAGTTAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTa < 2:499226/149‑1 (MQ=255) tctctcCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTa > 2:3655915/1‑149 (MQ=255) tctctcCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTa > 1:295350/1‑149 (MQ=255) tcCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCa > 2:725155/1‑149 (MQ=255) gTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATcac > 1:1755269/1‑149 (MQ=255) gAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATcacca > 1:732142/1‑149 (MQ=255) aaaaaTAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATcaccac < 2:3135954/149‑1 (MQ=255) aaaaTAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCaccacc > 1:796157/1‑149 (MQ=255) aaTAGTGCGACTGCGTTGTTATGCATAGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTTTGTTCTATGTTCAGCGATGATTACGCATCACCACCGa > 2:1694684/1‑149 (MQ=255) ttgTGCGAGTGCGTTGTTATGAATTGCACTGTACCCGTACCCGATTACAAAAGACACAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGaaa < 1:3474915/147‑1 (MQ=255) tAGTGCGACTGCGTTGTTATGCATGGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGaaa < 1:3630844/149‑1 (MQ=255) gTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAacg > 1:316480/1‑149 (MQ=255) gACTGGGTTGTTATGCATTGCACTGTCCCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAacgacga < 2:2938954/149‑1 (MQ=255) ggttttttATGCTTTGCACTTTACCATTACCCTATTAAAAAAGACATAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGTTTGTGTTCGCTGTTCAGCGTTGATTACGCATCACCACCGAAACgacgacgac < 1:3021704/143‑1 (MQ=255) cGTTTTTATGATTTGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGAcc < 1:1014073/149‑1 (MQ=255) tGCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAAtcatca < 2:208103/149‑1 (MQ=255) tGCACTGTACCAGTACCCGAGAACAAAACACATAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAAtcatca < 1:2692261/149‑1 (MQ=255) gCACTGTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCac > 2:561541/1‑149 (MQ=255) gTACCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGAcgc > 1:2518748/1‑149 (MQ=255) aCCAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGACTCATCACGACGCgg > 2:967173/1‑149 (MQ=255) ccAGTACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGa > 1:1994991/1‑149 (MQ=255) aGTACCCGAGTACAAACGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAgc < 2:480206/149‑1 (MQ=255) tACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAgcgc > 2:3390588/1‑149 (MQ=255) tACCCGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAgcgc > 2:3390521/1‑149 (MQ=255) | CTGCGCCAATAATGGTGCCGCCGATAATCACCACGCCGCCAAGCAGCGACGGTGACGTTTGGGTGGTGGTTAGTGTTGCCATGAGGGCTTCTCTCCAGTGAAAAATAGTGCGACTGCGTTGTTATGCATTGCACTGTACCAGTACACGAGTACAAAAGACAGAAAAAAAGCCCCGATGGTAAAAATCGGGGCTGTATATATTATTTTACAGATTGTGTTCGCTGTTCAGCGATGATTACGCATCACCACCGAAACGACGACGACCGGTAGAATCATCACGACGCGGAGCGC > CP009273/3299095‑3299385 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |