| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP009273 | 3,841,409 | +CAACCAG | 100% | coding (576/1320 nt) | uhpC ← | membrane protein regulates uhpT expression |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP009273 | = 3841409 | 2 (0.010) | 135 (0.710) +CAACCAG |
82/240 | NT | 98.2% | coding (576/1320 nt) | uhpC | membrane protein regulates uhpT expression |
| ? | CP009273 | 3841410 = | 3 (0.010) | coding (575/1320 nt) | uhpC | membrane protein regulates uhpT expression | |||||
Only 100 of 155 total aligned reads displayed.
GCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTA > CP009273/3841273‑3841557 | ccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAat > 2:1635029‑M2/138‑148 (MQ=255)ccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAat < 1:3363494‑M2/11‑1 (MQ=255)ccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAat > 1:3106851‑M2/138‑148 (MQ=255)ccctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAat > 1:3106750‑M2/138‑148 (MQ=255) ctgccccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAatca < 1:954777‑M2/13‑1 (MQ=255) ccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAatcatcatc > 1:1089700‑M2/131‑148 (MQ=255) ccttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAatcatcatc < 2:534283‑M2/18‑1 (MQ=255) cttcttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATcc < 2:670775‑M2/19‑1 (MQ=255) cttgttgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCgg > 1:3246507‑M2/127‑148 (MQ=255) tgttgagcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGc > 1:2624130‑M2/122‑148 (MQ=255) gcaatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCg > 1:3436296‑M2/116‑148 (MQ=255) caatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGt < 1:1584116‑M2/34‑1 (MQ=255) caatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGt < 1:1584128‑M2/34‑1 (MQ=255) aatttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTa < 1:423390‑M2/35‑1 (MQ=255) atttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTaa < 1:2856790‑M2/36‑1 (MQ=255) atttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTaa < 2:2793760‑M2/36‑1 (MQ=255) ttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATg < 1:1741797‑M2/38‑1 (MQ=255) ttccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATg > 2:2677390‑M2/111‑148 (MQ=255) ccagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcatagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATgca < 2:656752‑M2/40‑1 (MQ=255) cagcgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATgcag < 1:2311026‑M2/41‑1 (MQ=255) cgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactctcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATgcagcgc < 2:329657‑M2/44‑1 (MQ=255) cgcgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaacccgCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATgcagcgc > 2:2055324‑M2/105‑148 (MQ=255) cgtcgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATgcagcgcag < 1:1484610‑M2/46‑1 (MQ=255) cgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCg > 1:2617709‑M2/100‑148 (MQ=255) cgtgtcgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCACGGCACGCCAGCCGTAATGCAGCGCAGCCg > 1:2617876‑M2/100‑148 (MQ=255) cgtgtcgccagtcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCg < 2:3496400‑M2/49‑1 (MQ=255) tcgccattcaccgaccgccggtaaacctcacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaacccgCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGc > 2:3471962‑M2/96‑148 (MQ=255) tcgccattcaccgaccgccggtaaaactaacgcctgcgggctatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCAAGCCAGCCGTAATGCAGCGCAGCCGCTGc > 2:3405055‑M2/96‑148 (MQ=255) cgccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGcc < 1:2374783‑M2/54‑1 (MQ=255) ccattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCAt > 2:251308‑M2/93‑148 (MQ=255) cattcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATc > 1:2470744‑M2/92‑148 (MQ=255) ttcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATcac > 2:2601591‑M2/90‑148 (MQ=255) tcaccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATcaca > 1:2415411‑M2/89‑148 (MQ=255) caccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACaa < 1:1162616‑M2/61‑1 (MQ=255) ccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATg < 2:295692‑M2/63‑1 (MQ=255) ccgaccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATg > 2:1044882‑M2/86‑148 (MQ=255) accgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGa < 2:1979394‑M2/66‑1 (MQ=255) accgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGa < 2:1055369‑M2/66‑1 (MQ=255) ccgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGaa < 2:3106750‑M2/67‑1 (MQ=255) cgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGggact > 1:1554591‑M2/81‑146 (MQ=255) cgccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAAt > 1:1554341‑M2/81‑148 (MQ=255) gccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATg < 2:974442‑M2/69‑1 (MQ=255) gccggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATg > 2:3162179‑M2/80‑148 (MQ=255) cggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAg > 2:2659266‑M2/78‑148 (MQ=255) cggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAg < 2:3536118‑M2/71‑1 (MQ=255) ggtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGt < 2:1291938‑M2/72‑1 (MQ=255) gtaaacctcacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCTGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTg < 2:2352261‑M2/73‑1 (MQ=255) gtaaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTg > 1:1761415‑M2/76‑148 (MQ=255) aaacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTgcg > 2:390638‑M2/74‑148 (MQ=255) aacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTgcgc > 1:414533‑M2/73‑148 (MQ=255) aacctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTgcgc > 1:2605495‑M2/73‑148 (MQ=255) acctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGcgcc > 1:533290‑M2/72‑148 (MQ=255) cctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGcgccg > 1:2782616‑M2/71‑148 (MQ=255) ctaacgcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGcgccgc < 1:3221354‑M2/79‑1 (MQ=255) gcctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACg > 1:1075578‑M2/65‑148 (MQ=255) ctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGtt < 2:2003231‑M2/86‑1 (MQ=255) ctgcgggcgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGtt < 1:3343238‑M2/86‑1 (MQ=255) cgatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGcc > 2:1975229‑M2/56‑148 (MQ=255) gatcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCg < 1:3296726‑M2/94‑1 (MQ=255) atcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCgt < 1:2024895‑M2/95‑1 (MQ=255) tcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCgtg < 1:1813093‑M2/96‑1 (MQ=255) tcgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCgtg < 1:1789492‑M2/96‑1 (MQ=255) atcgcgtagccgccagcagagaaaaatcccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCgtg < 1:1276414‑M2/96‑1 (MQ=255) cgcgtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCgtgt < 1:2601591‑M2/97‑1 (MQ=255) gtagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTcc < 2:3436296‑M2/100‑1 (MQ=255) tagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGACTGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCa > 2:327132‑M2/48‑148 (MQ=255) tagccgccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCa > 2:327147‑M2/48‑148 (MQ=255) ccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGc < 2:1519042‑M2/107‑1 (MQ=255) ccagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGc < 2:1518094‑M2/107‑1 (MQ=255) cagcagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGACAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGcc < 2:2756322‑M2/108‑1 (MQ=255) cagagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCccac > 1:2738531‑M2/38‑148 (MQ=255) gagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCccacca > 1:568584‑M2/36‑148 (MQ=255) gagaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCccacca > 1:2584484‑M2/36‑148 (MQ=255) agaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCaa > 2:3364732‑M2/35‑148 (MQ=255) agaaaaatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCaa > 2:381648‑M2/35‑148 (MQ=255) aatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAAccgcc > 2:2869568‑M2/30‑148 (MQ=255) aatccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAAccgcc > 2:1094724‑M2/30‑148 (MQ=255) ccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCcgcg < 2:3184959‑M2/122‑1 (MQ=255) ccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCcgcg < 2:3475533‑M2/122‑1 (MQ=255) ccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCcgcg > 1:1903757‑M2/27‑148 (MQ=255) ccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCcgcg > 1:1904092‑M2/27‑148 (MQ=255) ccccacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCcgcg < 2:1220126‑M2/122‑1 (MQ=255) cacgactatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTc > 1:1147201‑M2/24‑148 (MQ=255) ctatcgccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTAc > 1:2702003‑M2/19‑148 (MQ=255) gccatacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGaa > 1:606180‑M2/14‑148 (MQ=255) catacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATa > 1:531712‑M2/12‑148 (MQ=255) cTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATa < 2:1149779/148‑1 (MQ=255) atacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATAc > 1:3395395‑M2/11‑148 (MQ=255) tacaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATAcc < 1:2573712‑M2/139‑1 (MQ=255) acaaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCa > 1:1394251‑M2/9‑148 (MQ=255) caaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAg > 1:1433716‑M2/8‑148 (MQ=255) aaccagCAACCAGCAATCATCATCCCGGTACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAgg > 2:1650234‑M2/7‑148 (MQ=255) aaccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAgg < 2:533290‑M2/142‑1 (MQ=255) accagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGc < 2:1089700‑M2/143‑1 (MQ=255) accagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGc < 2:3246507‑M2/143‑1 (MQ=255) ccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGcc > 2:1469736‑M2/5‑148 (MQ=255) ccagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGcc > 2:2421886‑M2/5‑148 (MQ=255) cagCAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCg > 1:1245105‑M2/4‑148 (MQ=255) cAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTa > 2:1268328/1‑148 (MQ=255) cAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTa > 2:2655280/1‑148 (MQ=255) | GCGTCAACCCTGCCCCTTCTTGTTGTTGAGCAATTTCCAGCGCGTCGTGTCGCCATTCACCGACCGCCGGTAAACCTAACGCCTGCGGGCGATCGCGTAGCCGCCAGCAGAGAAAAATCCCCACGACTATCGCCATACAACCAGCAATCATCATCCCGGCACGCCAGCCGTAATGCAGCGCAGCCGCTGCCATCACAATGGGAATGAGTGCGCCGCCGACGTTATGCGCCGTGTTCCATAATGCCCACCAACCGCCGCGCTCGGTACGTGAATACCAGGCCGTTA > CP009273/3841273‑3841557 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |