| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,567,059 | C→A | 100% | intergenic (‑197/+76) | glgB ← / ← asd | 1,4‑alpha‑glucan branching enzyme/aspartate‑semialdehyde dehydrogenase, NAD(P)‑binding |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,567,059 | 0 | C | A | 97.5% | 663.5 / 6.2 | 213 | intergenic (‑197/+76) | glgB/asd | 1,4‑alpha‑glucan branching enzyme/aspartate‑semialdehyde dehydrogenase, NAD(P)‑binding |
| Reads supporting (aligned to +/- strand): ref base C (3/3); new base A (116/91); total (119/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 213 total aligned reads displayed.
TGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACGG > CP009273/3566915‑3567202 | ggTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGa > 1:1132885/1‑148 (MQ=255) ttGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGaaa > 2:244574/1‑148 (MQ=255) ttGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGaaa > 1:388892/1‑148 (MQ=255) tgtgACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAAc > 1:3469756/1‑148 (MQ=255) tgtgACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAAc > 2:1205654/1‑148 (MQ=255) tgACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACAt < 1:2166886/148‑1 (MQ=255) aCATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCt < 1:3226839/148‑1 (MQ=255) aCATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCt > 1:3280578/1‑148 (MQ=255) aCATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCt > 1:1239132/1‑148 (MQ=255) aCATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCt > 1:1905867/1‑148 (MQ=255) cATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTg > 1:74247/1‑148 (MQ=255) aCCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTcc < 2:1813532/148‑1 (MQ=255) ccTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCt > 2:3458704/1‑148 (MQ=255) ccTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCt > 1:1850221/1‑148 (MQ=255) ccTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCt < 2:1551855/148‑1 (MQ=255) gAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGtc > 2:1657760/1‑147 (MQ=255) gAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTa > 2:3419004/1‑148 (MQ=255) gAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTa < 1:2196423/148‑1 (MQ=255) cGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTa > 1:3430719/1‑148 (MQ=255) cgcAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGc < 2:569323/148‑1 (MQ=255) cgcAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGc < 1:3553239/148‑1 (MQ=255) gcagcaCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCa < 2:2738364/148‑1 (MQ=255) cagcaCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCAc > 1:845865/1‑148 (MQ=255) gcaCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTa > 1:1288247/1‑148 (MQ=255) caCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTaa > 1:2747836/1‑148 (MQ=255) aCTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAAc > 1:2380758/1‑148 (MQ=255) gCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGggcg > 1:80135/1‑148 (MQ=255) ccTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCAt < 2:1756497/148‑1 (MQ=255) ccTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCAt < 1:2886422/148‑1 (MQ=255) ctctGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATcgc > 1:2433320/1‑148 (MQ=255) gCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGccc < 2:1583380/148‑1 (MQ=255) gCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGccc < 1:419306/148‑1 (MQ=255) cgtcgtCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGcccc < 1:2608750/148‑1 (MQ=255) gtcCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGAt < 1:2823477/148‑1 (MQ=255) gtcCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGAt < 1:2530043/148‑1 (MQ=255) ccTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGAttt < 1:2239169/148‑1 (MQ=255) tCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTaa < 2:2070698/148‑1 (MQ=255) tCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTaa < 2:905343/148‑1 (MQ=255) tCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTaa < 2:3469756/148‑1 (MQ=255) tCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTaa < 2:2640641/148‑1 (MQ=255) aCTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATg > 2:2028674/1‑148 (MQ=255) aCTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATg > 2:2422832/1‑148 (MQ=255) tCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAAt < 1:710207/148‑1 (MQ=255) tCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAAt < 1:469367/148‑1 (MQ=255) aGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATaa > 2:499080/1‑148 (MQ=255) aGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATaa > 2:2360043/1‑148 (MQ=255) gTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTGACTCCTGTATTACGCACTTACAGGGGCGGCCTCGCGCCCCAGATTTAATGACTAAAg > 2:3246376/1‑148 (MQ=255) gTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAg < 1:436205/148‑1 (MQ=255) ggCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTa > 2:3054422/1‑148 (MQ=255) ggCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTa < 2:1281637/148‑1 (MQ=255) tgtgAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGc < 1:840988/148‑1 (MQ=255) gtgAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGcc < 2:705234/148‑1 (MQ=255) gtgAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGcc < 2:389215/148‑1 (MQ=255) gtgAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGcc < 1:226193/148‑1 (MQ=255) gAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAg > 2:2030246/1‑148 (MQ=255) gAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAg < 2:3526757/148‑1 (MQ=255) aaTACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGt < 2:306881/148‑1 (MQ=255) aTACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGtt > 2:75064/1‑148 (MQ=255) aTACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGtt > 2:3378721/1‑148 (MQ=255) tACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTg > 1:2084142/1‑148 (MQ=255) tACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTg < 2:2662094/148‑1 (MQ=255) cATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGa > 2:1959258/1‑148 (MQ=255) tGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAg > 1:888400/1‑148 (MQ=255) aGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGa < 2:3000797/148‑1 (MQ=255) gCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGAc > 2:3095402/1‑148 (MQ=255) cACCCTTAAATAATAGCCAATGCTCTATTTAAATCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACATGTGCGGCATAGCTACCCTGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATGCGTCGc < 2:1459656/148‑1 (MQ=255) cACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGc > 2:1287965/1‑148 (MQ=255) cACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGc > 1:1185806/1‑148 (MQ=255) cccTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAg > 1:3314977/1‑148 (MQ=255) ccTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGc > 2:1518219/1‑148 (MQ=255) cTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAATGATTACGCCAGTTGACGAAGCATCCGACGCAGCg > 1:1298110/1‑148 (MQ=255) aaGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTc > 2:1113188/1‑148 (MQ=255) aaGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTc > 2:2260753/1‑148 (MQ=255) aaGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTc > 2:849214/1‑148 (MQ=255) aaGAATAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTc > 2:2887675/1‑148 (MQ=255) tAGCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCgg > 2:2771037/1‑148 (MQ=255) gCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGcc > 2:2492946/1‑148 (MQ=255) gCCAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGcc > 2:1419132/1‑148 (MQ=255) ccAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGccc > 1:1504096/1‑148 (MQ=255) ccAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGccc > 1:2701756/1‑148 (MQ=255) cAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGcccc > 1:3154709/1‑148 (MQ=255) cAATGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGcccc > 1:3100234/1‑148 (MQ=255) aTGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGcccccc > 1:1538973/1‑148 (MQ=255) tGCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCca < 1:2022260/148‑1 (MQ=255) gCTCTATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACCAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCcac < 2:1239132/148‑1 (MQ=255) ctctATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCcaca > 1:2422593/1‑148 (MQ=255) tctATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCAcag > 1:753584/1‑148 (MQ=255) ctATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCAcagc > 2:166366/1‑148 (MQ=255) ctATTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCAcagc > 2:2842803/1‑148 (MQ=255) aTTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCAcagcag < 1:2413263/148‑1 (MQ=255) aTTTAACTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCAcagcag < 2:219997/148‑1 (MQ=255) aaCTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTgg < 2:3347504/148‑1 (MQ=255) aaCTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTgg < 1:600765/148‑1 (MQ=255) aCTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGt > 1:2312863/1‑148 (MQ=255) aCTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGt > 2:2984405/1‑148 (MQ=255) cTCCCGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTc > 2:1776635/1‑148 (MQ=255) cGGTAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGccc < 2:1905867/148‑1 (MQ=255) tAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGcc > 1:823416/1‑124 (MQ=255) tAAATAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGcc < 2:823416/124‑1 (MQ=255) aaaTAATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACgg > 2:3046832/1‑148 (MQ=255) | TGGTTGTGACATTTTTTTGACCTGAACGGCGCAGCACTCTGTGCATCCTCTCTGCGTCGTCCTCACTTCAGGTAAGGCTGTGAATACTCATGTATTCAGCCACCCTTAAAGAATAGCCAATGCTCTATTTAACTCCCGGTAAATCATGAAACATCTGCGCTTACTCCTGTATTACGCACTAACAGGGGCGGCATCGCGCCCCAGATTTAATGAATAAAGATTACGCCAGTTGACGAAGCATCCGACGCAGCGGCTCCGCGGCCCCCCACAGCAGCTGGTCGCCCACGG > CP009273/3566915‑3567202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |