| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,644,531 | G→A | 100% | intergenic (+509/‑120) | arsC → / → yhiS | arsenate reductase/pseudogene |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,644,531 | 0 | G | A | 97.4% | 852.4 / 8.1 | 262 | intergenic (+509/‑120) | arsC/yhiS | arsenate reductase/pseudogene |
| Reads supporting (aligned to +/- strand): ref base G (1/6); new base A (110/145); total (111/151) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.44e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 262 total aligned reads displayed.
AATCACTTCACACACTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGGTAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTACCCCAGGTA > CP009273/3644386‑3644675 | aaTCACTTCACACACTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATa < 1:2453259/148‑1 (MQ=255)aaTCACTTCACACACTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATa < 1:723721/148‑1 (MQ=255) aTCACTTCACACACTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGGTaa > 2:479899/1‑148 (MQ=255) tCACTTCACACACTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAAt < 1:1880298/148‑1 (MQ=255) cACTTCACACACTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAAtt > 1:1533444/1‑148 (MQ=255) tCACACACTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGGTAATTatat < 2:2935664/148‑1 (MQ=255) tCACACACTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTatat > 2:850269/1‑148 (MQ=255) cacacTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAg < 2:1150209/148‑1 (MQ=255) acacTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAgg < 2:2365936/148‑1 (MQ=255) cacTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGa > 1:1841089/1‑148 (MQ=255) cTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAg > 2:637344/1‑148 (MQ=255) aTCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGat > 1:3203273/1‑148 (MQ=255) agagAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGGTAATTATATCAGGAAGAtata < 2:2612646/148‑1 (MQ=255) aCATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCa < 1:2147598/148‑1 (MQ=255) taataaCTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTa < 2:2569942/148‑1 (MQ=255) aataaCTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTAc > 1:1753892/1‑148 (MQ=255) aataaCTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTAc > 1:2272274/1‑148 (MQ=255) ataaCTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACa > 2:1009639/1‑148 (MQ=255) ataaCTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACa < 2:1474770/148‑1 (MQ=255) aaCTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACAtt > 2:2869123/1‑148 (MQ=255) aCTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACAttt < 1:1420265/148‑1 (MQ=255) cTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTa < 2:3471702/148‑1 (MQ=255) ttttAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTAtt < 2:2877051/148‑1 (MQ=255) ttttAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTAtt < 1:1258944/148‑1 (MQ=255) tAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATtgtg < 1:62597/148‑1 (MQ=255) aaaTGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATtgtgtg > 1:2907615/1‑148 (MQ=255) aaaTGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAAAGCATTACATTTAAtgtgtg > 2:2205431/1‑148 (MQ=255) tGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTag > 2:1663551/1‑148 (MQ=255) gcgcATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTagaag < 2:1912540/148‑1 (MQ=255) cATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGaaa < 2:349510/148‑1 (MQ=255) ttttGATAGTTGTTAACGATTTCCTTGACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAAt < 1:2685852/148‑1 (MQ=255) tttGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATc > 2:1409357/1‑148 (MQ=255) tttGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATc > 2:1881168/1‑148 (MQ=255) tttatatTTTTTAACTATTTCATTTACGATACTATCACTACCATTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATcc < 2:3519284/145‑1 (MQ=255) tGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCa < 1:1075036/148‑1 (MQ=255) gATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCAt < 1:23062/148‑1 (MQ=255) aTAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGTGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCAtt > 1:805573/1‑148 (MQ=255) gttgttAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCt > 1:2803770/1‑148 (MQ=255) ttgttAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTg < 2:2278778/148‑1 (MQ=255) tgttAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGt < 1:1009639/148‑1 (MQ=255) aCGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTaa > 2:3094931/1‑148 (MQ=255) cGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGGTAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAAt < 2:121420/148‑1 (MQ=255) aTTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTa > 1:488072/1‑148 (MQ=255) tttCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTAt < 1:630641/148‑1 (MQ=255) tttCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTAt > 1:915689/1‑148 (MQ=255) ttCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATc < 2:206783/148‑1 (MQ=255) ttCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATc < 2:208373/148‑1 (MQ=255) ttCCTATACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATc > 1:1709235/1‑148 (MQ=255) tttACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAAt > 1:1386865/1‑148 (MQ=255) tACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAAttt > 1:3356183/1‑148 (MQ=255) aCGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTa < 1:2109270/148‑1 (MQ=255) gATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTaaa < 1:2565179/148‑1 (MQ=255) aTACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAAc < 1:1293739/148‑1 (MQ=255) aTACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAAc < 2:603733/148‑1 (MQ=255) tACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACa > 2:992858/1‑148 (MQ=255) aCTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACAt > 2:2662343/1‑148 (MQ=255) cTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGGTAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATc < 1:2467191/148‑1 (MQ=255) cTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATc < 1:260053/148‑1 (MQ=255) cTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATc < 2:1952554/148‑1 (MQ=255) tATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCt < 2:2031028/148‑1 (MQ=255) aTCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGATAATCCATTCCTGTTCTAATTATCCAATTTAAACATCtt > 1:178413/1‑148 (MQ=255) aTCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCtt < 2:682402/148‑1 (MQ=255) aTCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCtt > 1:1573978/1‑148 (MQ=255) aTCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCtt > 1:3227777/1‑148 (MQ=255) tCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTa > 1:1228059/1‑148 (MQ=255) tCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTa < 1:1240244/148‑1 (MQ=255) cACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAg < 1:2619051/148‑1 (MQ=255) cACGACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAg < 2:3338374/148‑1 (MQ=255) cccTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATaa > 2:2001506/1‑148 (MQ=255) cTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATaaaa < 1:2840823/148‑1 (MQ=255) cTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATaaaa < 1:1952508/148‑1 (MQ=255) tttttttACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAAc > 2:729707/1‑148 (MQ=255) tttttACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACaa < 2:698633/148‑1 (MQ=255) ttttACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACaaa > 1:3276821/1‑148 (MQ=255) tttACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAat < 2:167773/148‑1 (MQ=255) ttACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAatg > 1:3317386/1‑148 (MQ=255) acacacAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATATTAGCATAAAACAAatgat > 2:1896720/1‑148 (MQ=255) acacaAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAAtgatga < 2:1701494/148‑1 (MQ=255) cacaAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGGTAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGaa < 2:2287946/148‑1 (MQ=255) cacaAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGaa > 1:3461037/1‑148 (MQ=255) acaAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAAt < 2:1533444/148‑1 (MQ=255) caAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATa > 1:3453703/1‑148 (MQ=255) atatTACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAgg < 2:1841089/148‑1 (MQ=255) ttACCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAAt < 1:353770/148‑1 (MQ=255) aCCGGGTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAAttt > 2:884173/1‑148 (MQ=255) gTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAAtttt < 2:3111626/144‑1 (MQ=255) gTGGAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTAtag > 1:3111540/1‑146 (MQ=255) ggAGATAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCa < 1:3094592/148‑1 (MQ=255) gaTAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAAtt > 1:1847299/1‑148 (MQ=255) tAAAAGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGa < 1:1440152/148‑1 (MQ=255) aaaaGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGAc > 1:994976/1‑148 (MQ=255) aaaaGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGAc < 2:275734/148‑1 (MQ=255) aaaGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACt < 2:3019561/148‑1 (MQ=255) aaGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACtt > 1:52990/1‑148 (MQ=255) aaGGGAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACtt < 2:3269281/148‑1 (MQ=255) attgAAATCAAAGATAATTATATCAGTAAGATATAACTCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATATTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACttt < 2:2391053/145‑1 (MQ=255) ggAAATCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTAc < 1:850269/148‑1 (MQ=255) aTCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTACCCCa < 2:1753892/148‑1 (MQ=255) aTCAAAGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTACCCCa < 2:2639530/148‑1 (MQ=255) aaGATAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTACCCCAGGta < 1:1587814/148‑1 (MQ=255) | AATCACTTCACACACTATCAGAGAACATAATAACTTTTTAAAATGAGCGCATTTTGATAGTTGTTAACGATTTCCTTTACGATACTATCACTACCCTTTTTTTACACACAAATATTACCGGGTGGAGATAAAAGGGAAATCAAAGGTAATTATATCAGGAAGATATAACGCATTACATTTATTGTGTGTAGAAGAAAATCCATTCCTGTTCTAATTATCCAATTTAAACATCTTAGCATAAAACAAATGATGAATAAGGAATTTTATGTCAATTGACTTTACCCCAGGTA > CP009273/3644386‑3644675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |