| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,692,994 | T→A | 100% | F474Y (TTC→TAC) | bcsG → | DUF3260 family inner membrane protein associated with cellulose production |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,692,994 | 0 | T | A | 96.1% | 530.2 / 6.7 | 165 | F474Y (TTC→TAC) | bcsG | DUF3260 family inner membrane protein associated with cellulose production |
| Reads supporting (aligned to +/- strand): ref base T (2/5); new base A (73/85); total (75/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.57e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 172 total aligned reads displayed.
TACTGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCACCAG > CP009273/3692848‑3693138 | tACTGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAAttc < 1:1965450/148‑1 (MQ=255) aCTGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGANAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAAtact < 1:1803647/148‑1 (MQ=255) aCTGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAAtact < 1:1144828/148‑1 (MQ=255) gAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCg > 2:84396/1‑148 (MQ=255) aaCTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCgg < 1:3257934/148‑1 (MQ=255) aaCTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCgg < 1:3257935/148‑1 (MQ=255) aaCTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCgg > 1:2508599/1‑148 (MQ=255) aCTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGc < 2:1030332/148‑1 (MQ=255) aCTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGc < 2:1103236/148‑1 (MQ=255) tGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATg < 2:2937215/148‑1 (MQ=255) agaAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGaa < 2:1600523/148‑1 (MQ=255) aTCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCa < 1:1642126/148‑1 (MQ=255) aTCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCa > 1:576744/1‑148 (MQ=255) tCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCAc < 1:1191404/148‑1 (MQ=255) tCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCAc > 1:685885/1‑148 (MQ=255) tCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCAc < 2:2154276/148‑1 (MQ=255) aGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAgggg > 1:250577/1‑148 (MQ=255) gTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAggggg > 2:2089649/1‑148 (MQ=255) gTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGAAGGTATCTGGCCTACGTGATATCCCTAGACCGTCTATCACCGACGTCCCCGTTGGTGTGAAATACATCGGCATGAAGGCACCTCATCAggggg > 2:2089726/1‑148 (MQ=255) gtggtgCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCACTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCa < 1:2580970/148‑1 (MQ=255) tggtgCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCAt > 2:2609410/1‑148 (MQ=255) tgCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGa < 2:1979238/148‑1 (MQ=255) gCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGaa < 1:1482902/148‑1 (MQ=255) gCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGaa < 1:921804/148‑1 (MQ=255) cGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGaaca < 2:2322162/148‑1 (MQ=255) cGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGaaca < 2:2322081/148‑1 (MQ=255) aaCACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAAcc > 1:1666158/1‑148 (MQ=255) acacGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCg < 2:2525114/148‑1 (MQ=255) cggcggCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGagc < 1:3450674/148‑1 (MQ=255) cgtcgcgcTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGagcagc > 1:2884642/4‑148 (MQ=255) cggcgCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGagcagc < 1:1885262/148‑1 (MQ=255) cgcgcTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTTATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTc < 2:1390644/148‑1 (MQ=255) cgcTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCt > 2:1034787/1‑148 (MQ=255) cTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTgg < 1:663502/148‑1 (MQ=255) cTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGACCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTgg > 1:1988832/1‑148 (MQ=255) tGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGc > 2:116315/1‑148 (MQ=255) aaGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTa > 2:3146370/1‑148 (MQ=255) aaGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTa > 2:2520285/1‑148 (MQ=255) gggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtc > 1:898409/1‑148 (MQ=255) gggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtc > 1:3140107/1‑148 (MQ=255) ggCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTAtct > 2:1867042/1‑148 (MQ=255) cGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTcc < 2:889087/148‑1 (MQ=255) aCAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGa > 1:2008624/1‑148 (MQ=255) aaTGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTCTCTCCGATCtg > 2:3084914/1‑148 (MQ=255) aaTGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCtg < 1:84396/148‑1 (MQ=255) cAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCtggtgg > 1:2827519/1‑148 (MQ=255) ggTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGtt > 1:1010673/1‑148 (MQ=255) aacTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACACCCGAGCAGCTTCCTGGCTCTCTCCGATCTGGTGGTTcgc > 1:689660/3‑148 (MQ=255) tCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTcgct > 1:1795439/1‑147 (MQ=255) cTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTcgctt > 2:330372/1‑146 (MQ=255) cTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGt > 1:3020360/1‑148 (MQ=255) ccTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTtctc > 1:3166938/1‑148 (MQ=255) ccTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTtctc > 1:3166896/1‑148 (MQ=255) cTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCg < 2:3254637/148‑1 (MQ=255) cTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCg < 1:2895973/148‑1 (MQ=255) cTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCg < 1:2455688/148‑1 (MQ=255) tACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGa < 1:956756/148‑1 (MQ=255) tACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGa < 1:3037304/148‑1 (MQ=255) tACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGa < 2:528157/148‑1 (MQ=255) aCGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGAt < 1:2133986/148‑1 (MQ=255) aCGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGAt < 1:2385094/148‑1 (MQ=255) cGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATg > 1:1291704/1‑148 (MQ=255) gATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCa > 1:689576/1‑148 (MQ=255) gATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCa < 2:1737494/148‑1 (MQ=255) atatCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCaa > 2:396937/1‑148 (MQ=255) atCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGa > 1:2968469/1‑148 (MQ=255) ccTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGAttt > 1:1593301/1‑148 (MQ=255) tAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTc < 2:3517250/148‑1 (MQ=255) aGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCa < 2:626374/148‑1 (MQ=255) cGTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGa < 2:576744/148‑1 (MQ=255) gTCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGaa > 2:956392/1‑148 (MQ=255) tCTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAg < 1:883801/148‑1 (MQ=255) cTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGa < 1:1054500/148‑1 (MQ=255) cTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGa < 2:2918980/148‑1 (MQ=255) cTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGa > 2:483073/1‑148 (MQ=255) cTATCACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGa > 1:699447/1‑148 (MQ=255) cACCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAAt > 2:1640984/1‑148 (MQ=255) aCCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATg < 2:687189/148‑1 (MQ=255) aCCGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATg < 2:685871/148‑1 (MQ=255) ccGACGTCCGCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGt < 1:2274630/148‑1 (MQ=255) ccGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACTGAAGACAATGt < 2:339951/148‑1 (MQ=255) ccGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGt < 1:2274594/148‑1 (MQ=255) ccGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGt < 2:1652231/148‑1 (MQ=255) ccGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGt < 2:3144900/148‑1 (MQ=255) cGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGtt > 2:180821/1‑148 (MQ=255) cGACGTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGtt > 2:2382498/1‑148 (MQ=255) gTCCCCGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACt < 2:1101906/148‑1 (MQ=255) ccccGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTgg > 1:2683528/1‑148 (MQ=255) cccGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGa > 1:3351888/1‑148 (MQ=255) cccGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGa < 2:2508599/148‑1 (MQ=255) ccGTTGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTcg > 1:1104273/1‑103 (MQ=255) gTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGaaaa < 2:1195659/148‑1 (MQ=255) gTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGaaaa < 2:2176156/148‑1 (MQ=255) ttGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGaaaaa > 1:4617/1‑148 (MQ=255) ttGGGGTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGaaaaa > 1:4394/1‑148 (MQ=255) gggTGACATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACt < 1:611717/148‑1 (MQ=255) ggTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTc < 2:3168066/148‑1 (MQ=255) gTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCTTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCa < 2:784807/148‑1 (MQ=255) gTGAAATACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCa < 2:2956035/148‑1 (MQ=255) aaTACTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCACCAg > 1:3181246/1‑148 (MQ=255) | TACTGAACTTGAGAAATCGGGTCGTAAAGTGATGGTGGTCGTGGTGCCGGAACACGGCGGCGCGCTGAAGGGCGACAGAATGCAGGTATCTGGCCTACGTGATATCCCTAGCCCGTCTATCACCGACGTCCCCGTTGGGGTGAAATTCTTCGGCATGAAGGCACCGCATCAGGGGGCACCGATTGTCATCGAACAACCGAGCAGCTTCCTGGCTATCTCCGATCTGGTGGTTCGCGTTCTCGATGGCAAGATTTTCACCGAAGACAATGTTGACTGGAAAAAACTCACCAG > CP009273/3692848‑3693138 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |