| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,698,119 | C→A | 100% | M1M (ATG→ATT) † | dppC ← | dipeptide/heme transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,698,119 | 0 | C | A | 98.8% | 511.3 / ‑1.4 | 162 | M1M (ATG→ATT) † | dppC | dipeptide/heme transporter |
| Reads supporting (aligned to +/- strand): ref base C (2/0); new base A (87/73); total (89/73) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.02e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.61e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 162 total aligned reads displayed.
TGGCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTGCG > CP009273/3697974‑3698263 | ggCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatg < 1:385902/148‑1 (MQ=255) cAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatgat < 1:1658106/148‑1 (MQ=255) aaaGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatgatg < 2:816617/148‑1 (MQ=255) aaaGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGATTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatgatg < 2:205760/148‑1 (MQ=255) aGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTc > 2:3102802/1‑148 (MQ=255) gATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTcc < 1:1451868/148‑1 (MQ=255) aTCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTccc < 1:940803/148‑1 (MQ=255) tCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTcccc < 2:2952627/148‑1 (MQ=255) tCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAAGAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTcccc < 2:2078522/148‑1 (MQ=255) cgcgATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCGTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTCACGGGGTCATCGGCACCGGTGCGCTAATCACTTTTTTTTCAGTAACCTGTGAAATGATGTCCCCt < 2:1262450/148‑1 (MQ=255) cgATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTa < 1:1633268/148‑1 (MQ=255) gATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTAc < 1:3485958/148‑1 (MQ=255) gATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTAc < 1:370677/148‑1 (MQ=255) gATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTAc < 1:2784013/148‑1 (MQ=255) tGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActt > 2:3533304/1‑148 (MQ=255) gAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtc < 2:1535843/148‑1 (MQ=255) aaCAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtct > 1:1019304/1‑148 (MQ=255) aCAGCTCGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTATTCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActtctt < 2:621353/148‑1 (MQ=255) gCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATg < 2:3396805/148‑1 (MQ=255) cGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACg > 2:174535/1‑148 (MQ=255) gATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGa < 1:11511/148‑1 (MQ=255) aTGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGaa > 1:2392508/1‑148 (MQ=255) tGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAAt < 1:1899061/148‑1 (MQ=255) tGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAAt > 1:1194998/1‑148 (MQ=255) tAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGt < 2:328161/148‑1 (MQ=255) tAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGt < 2:808287/148‑1 (MQ=255) aaaCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGtt > 1:2017341/1‑148 (MQ=255) aaaCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGtt > 2:2030587/1‑148 (MQ=255) aaaCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGtt > 2:1247769/1‑148 (MQ=255) aaaCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGtt > 2:236820/1‑148 (MQ=255) aaaCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGtt > 2:2748008/1‑148 (MQ=255) aaaCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGtt > 1:1319166/1‑148 (MQ=255) aaCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTc > 1:1460996/1‑148 (MQ=255) gCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTcaccac > 2:1899235/1‑148 (MQ=255) gCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTcaccac > 2:1899437/1‑148 (MQ=255) gCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTcaccac > 1:2598886/1‑148 (MQ=255) gCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTcaccac > 2:1168074/1‑148 (MQ=255) cccGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACg > 2:2837254/1‑148 (MQ=255) ccGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGc > 1:2896817/1‑148 (MQ=255) acCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTAca > 1:700061/1‑148 (MQ=255) acCGCGCCTTTGTGGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTAca > 1:2482903/1‑148 (MQ=255) cgcCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTAcagcag > 1:2710549/1‑148 (MQ=255) ccTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGAt > 2:3077207/1‑148 (MQ=255) ccTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGAt < 1:383131/148‑1 (MQ=255) cTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCTCCACGCCGTACAGCAGATc > 1:1060981/1‑148 (MQ=255) tttGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGTGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCg > 2:226609/1‑148 (MQ=255) tttGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCg > 1:2025983/1‑148 (MQ=255) ttgttgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGa < 2:1762259/148‑1 (MQ=255) tgttgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGTGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGAc > 1:32305/1‑148 (MQ=255) tgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAg > 1:1660049/1‑148 (MQ=255) tttAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAg > 1:1604227/1‑148 (MQ=255) ttAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGt > 1:2460152/1‑148 (MQ=255) tAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGtt > 1:2000717/1‑148 (MQ=255) aaaaTAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTg > 2:2106135/1‑148 (MQ=255) aaaaTAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTg < 1:77099/148‑1 (MQ=255) aTAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACg > 2:2891775/1‑148 (MQ=255) aTAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACg < 1:482830/148‑1 (MQ=255) tAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGa > 1:1774606/1‑148 (MQ=255) aGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAg > 1:1983646/1‑148 (MQ=255) aaCTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAatca < 1:2590896/148‑1 (MQ=255) tCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcg < 1:1928692/148‑1 (MQ=255) tCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcg > 1:3389572/1‑148 (MQ=255) cTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcgtc > 2:2590967/1‑148 (MQ=255) tGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcgtcg > 1:1255548/1‑148 (MQ=255) tGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcgtcg > 1:3027320/1‑148 (MQ=255) gTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGc < 2:1136231/148‑1 (MQ=255) aCGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGCCGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGccac < 2:2284536/148‑1 (MQ=255) ggTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTACCCTGTGAAATGATGTCCCATTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACAAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGc > 2:2432020/1‑148 (MQ=255) ggTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGc > 1:716306/1‑148 (MQ=255) gTCATCGGCACCGGTGTGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCa < 2:2155315/148‑1 (MQ=255) gTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTTCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCa > 1:3541698/1‑148 (MQ=255) cATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAAt < 2:3192523/148‑1 (MQ=255) aTCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATCATCCTCGTCGCCACCAGCAATa > 1:1904946/1‑148 (MQ=255) tCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAc > 2:2918075/1‑148 (MQ=255) tCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAc > 2:2386209/1‑148 (MQ=255) cGGCACCGGTGTGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcg < 2:1079221/148‑1 (MQ=255) cGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcg < 2:2381061/148‑1 (MQ=255) cGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcg < 1:2882530/148‑1 (MQ=255) ggCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcgc > 1:3431306/1‑148 (MQ=255) gcgcTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCa < 1:1272564/148‑1 (MQ=255) gcgcTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCa < 1:1272467/148‑1 (MQ=255) cgcTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCAc > 2:1859361/1‑148 (MQ=255) cgcTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCAc > 1:1666306/1‑148 (MQ=255) aaTCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTAcc > 2:2328688/1‑148 (MQ=255) aTCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTAcct > 1:2936019/1‑147 (MQ=255) cACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGa < 1:3102806/148‑1 (MQ=255) cTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATa > 1:3552398/1‑148 (MQ=255) cTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATa > 1:1087533/1‑148 (MQ=255) ttATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGt < 2:589845/148‑1 (MQ=255) ttttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgc > 1:3252609/1‑148 (MQ=255) ttttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgc > 1:237381/1‑148 (MQ=255) tttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgcg > 2:2224376/1‑148 (MQ=255) cAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCgcggcg < 1:1102606/148‑1 (MQ=255) gTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGtt < 2:3057273/148‑1 (MQ=255) tAACCTGTGAAATGATGTCCCCTTACTTCTTCTGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTg < 2:1712931/148‑1 (MQ=255) tAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTg < 2:141347/148‑1 (MQ=255) tAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTg < 2:142845/148‑1 (MQ=255) aaCCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGc > 2:2968522/1‑148 (MQ=255) ccTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAg > 1:2248321/1‑148 (MQ=255) tgAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTGCg < 2:417090/148‑1 (MQ=255) | TGGCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTGCG > CP009273/3697974‑3698263 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |