BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	CP009273	3,822,345	T→G	8.7%	V14G (GTT→GGT)	xanP →	xanthine permease

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009273	3,822,345	0	T	G	8.7%	314.8 / 2.2	163	V14G (GTT→GGT)	xanP	xanthine permease
Reads supporting (aligned to +/- strand): ref base T (80/62); new base G (13/6); total (94/69)
Fisher's exact test for biased strand distribution p-value = 4.59e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 168 total aligned reads displayed.

AAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGG  >  CP009273/3822198‑3822489

aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCGGt                                                                                                                                                  >  2:2878250/1‑148 (MQ=255)

aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGt                                                                                                                                                  >  2:2082246/1‑148 (MQ=255)

aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTCTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGt                                                                                                                                                  <  1:1977990/148‑1 (MQ=255)

aaaGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCCTTTCTCTTTCGGTCAGCTAAAATGCCCGCTATGCTACCACGTGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGt                                                                                                                                                  >  2:2082198/1‑148 (MQ=255)

  aGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTg                                                                                                                                                >  1:1438837/1‑148 (MQ=255)

  aGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGGTg                                                                                                                                                >  2:568588/1‑148 (MQ=255)

    tGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTgcg                                                                                                                                              >  2:166662/1‑148 (MQ=255)

     gCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCGGTTtcgc                                                                                                                                             >  2:1627088/1‑148 (MQ=255)

     gCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCAACAACGGGATTGTTTTCGATGTCTTTTTCCACCCTCGAGTCAGAAAAAGCCCAC‑CCCGATgcgc                                                                                                                                             >  1:2496190/1‑148 (MQ=255)

      cATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATTGGCCA‑CCCGTTGAGCa                                                                                                                                            >  1:30033/1‑148 (MQ=255)

       aTTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAg                                                                                                                                           <  2:765514/148‑1 (MQ=255)

        tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGa                                                                                                                                          <  2:2630762/148‑1 (MQ=255)

        tttATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGa                                                                                                                                          <  2:2814997/148‑1 (MQ=255)

         ttATCTAATTTAAATTTTTAGAGGTGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGTATTGTTTTCTTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGAc                                                                                                                                         <  2:1370885/148‑1 (MQ=255)

           aTCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTc                                                                                                                                       >  2:1471090/1‑148 (MQ=255)

             ctctTTTAAATTTTTTGATGTGGTTGTGGCAATGGTTTGATTTTCTCTGTCGGTCAGATAAAATGCCCGCTTTGCTACCACGGGTTTGTTTTCGTTGTGTGTTTCCACCCTCGTGTCATAAAATGCGCAA‑CCGGTTGCGCAGACTCaa                                                                                                                                     <  1:2662628/148‑1 (MQ=255)

               cATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAACCCGGTTG‑GCAGACaaaaaa                                                                                                                                   >  1:1293731/1‑148 (MQ=255)

               cATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCCCTTGCGCAGACTCaaaa                                                                                                                                   >  1:1062439/1‑148 (MQ=255)

                 tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCGGTTTCGCAGACGAAAAACa                                                                                                                                 >  2:2439065/1‑148 (MQ=255)

                 tttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCGGTTGCGCAGACTCAAAACa                                                                                                                                 >  2:2161124/1‑148 (MQ=255)

                  ttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACac                                                                                                                                >  2:1456306/1‑147 (MQ=255)

                  ttAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGAGCAA‑CCCGTTGCGCCTACACAAAACAg                                                                                                                                >  1:1925401/1‑148 (MQ=255)

                   tAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAAAAGc                                                                                                                               >  1:2068958/1‑148 (MQ=255)

                     aaTATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTAGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGCTTTCGCCGACTCAAAACAGCGa                                                                                                                             >  1:2887018/1‑148 (MQ=255)

                      atatTTAGATGAGGATGTGGCAACCGTTTGCTTTTCTCTTTCGGTCAGCTAAAAGGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGGCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGaa                                                                                                                            <  2:771893/148‑1 (MQ=255)

                      atatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCCA‑CCCGGTGCGCACACTCaaaaaaaccca                                                                                                                            >  1:1515499/1‑141 (MQ=255)

                      atatTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGCTCAGCTAAAATGCCCGCTGTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGaa                                                                                                                            <  2:1545818/148‑1 (MQ=255)

                          ttAGATGAGGATGTGGCAAACGTTTGGTTTTCTCTGTCGGTCAGCTAAAAGGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGa                                                                                                                        <  2:1064954/148‑1 (MQ=255)

                          ttAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAAAAGCGAACTGa                                                                                                                        >  2:2636455/1‑148 (MQ=255)

                             gATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACACCGAACAGAttt                                                                                                                     >  1:2818973/1‑148 (MQ=255)

                              aTGAGGATGTGGCAACCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAACCAGCGAACTGATTTa                                                                                                                    <  2:1719870/148‑1 (MQ=255)

                                 aGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCCGGTGGGCACACTCAAAAAACCGAACAGATTTaaca                                                                                                                 >  1:650171/1‑145 (MQ=255)

                                  ggATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCTCGCGATTGTTTTCGATGTCTGCTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAAAAGCGAAAAGAttttcagt                                                                                                                >  1:3490711/1‑143 (MQ=255)

                                  ggATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACACAAAAAACCGAACAGATTTaaagt                                                                                                                >  1:2151194/1‑144 (MQ=255)

                                    aTGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCCGTTGCGCCCACTCAAAAAAACGAACAGATTTACAGTCt                                                                                                              >  1:119244/1‑148 (MQ=255)

                                          cAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGa                                                                                                        >  2:3214073/1‑148 (MQ=255)

                                            aaCGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATc                                                                                                      >  2:587871/1‑148 (MQ=255)

                                              cGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGATACCACGGGATTTTTTTCGTTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGt                                                                                                    <  2:3508722/148‑1 (MQ=255)

                                                 ttGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCC‑CCGGGTGCGCAGACACAAAAAAGCGAACTGATTTTACAGCTTGAAGATCGTccg                                                                                                 >  1:1225114/1‑148 (MQ=255)

                                                  tGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTccgc                                                                                                >  2:2236979/1‑148 (MQ=255)

                                                    cTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAC‑CCGGGTGCGCAGACACAAAACAGCGAACTGATTTACCGTCTTGAAGATAGTccgccc                                                                                              >  1:586604/1‑147 (MQ=255)

                                                    cTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTAACGTCTTGAAGATCGTccgccg                                                                                              >  2:3172424/1‑148 (MQ=255)

                                                        tctcTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGGGCCA‑CCCGGTGCGCAGAATCACAAAAACCCACATATTTAACGTCTTTAAGATCGTCCGCCGCGTc                                                                                          >  1:1552692/1‑148 (MQ=255)

                                                        tctcTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCGGGTGCGCAGACTCAAAAAAGCGAACTGATTTAACGTCTTGAAGATCGTCCGCCGCGTc                                                                                          >  1:1142297/1‑148 (MQ=255)

                                                           ctTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCC‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTc                                                                                       >  2:2050015/1‑148 (MQ=255)

                                                                ggTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAcc                                                                                  <  2:866471/148‑1 (MQ=255)

                                                                 gTCAGATAAAAGGCCCGTTTTGCAACCAGGGTTTTTTTTTCGTTGTGTGTTTCCACCCGCGAGACATAAATGGCGCAA‑CGGGTTGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAAccc                                                                                 <  1:1777093/148‑1 (MQ=255)

                                                                  tCAGCAAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTGTCCACCCTCGCGTCAGAAAATGCGCAA‑CGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCt                                                                                <  1:3246217/148‑1 (MQ=255)

                                                                   cAGCTAAAATGCCCGCTTTGCTACCACGGGATTTTTTTCGATGTCTGTTTCCACCCTCGAGGCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTg                                                                               <  2:247714/148‑1 (MQ=255)

                                                                   cAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAC‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTg                                                                               >  2:2284873/1‑148 (MQ=255)

                                                                   cAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTg                                                                               <  2:247810/148‑1 (MQ=255)

                                                                        aaaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCGGGTGCGCAGACTCAAAACACCGAACAGATTTAACGGCTTTAAGATCGTACGCCGCGTCCTCAAAACCAGTTTgc                                                                          >  1:2281929/1‑148 (MQ=255)

                                                                         aaaTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGCACTGATTTAACGTCTTGAAGAACGTCCGCCGCTTCCTCAAACCCTGTTTgcc                                                                         >  2:5033/1‑148 (MQ=255)

                                                                           aTGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGGTGCGCAGACTCAAAACACCGAACTGATTTACCGTCTTGAATATCCTCCGCCGCGGCCACAAACCCGGttttgcgc                                                                       >  1:96772/1‑143 (MQ=255)

                                                                            tGCCCGCTTTGCTACCACGGGTTTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAAGGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTgccgcc                                                                      <  2:1861709/148‑1 (MQ=255)

                                                                             gCCCGTTTTGCTACCCGGGTTTTGTTTTCGATGTTGGTTACCACCCTGTCTTCAGAAATGGCGAAA‑CGGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCt                                                                     <  1:3051343/148‑1 (MQ=255)

                                                                              ccgtcTTTGCTACCAGGGTTTTTTTTTCGTTGTCTGTAACCCCCCCCGACTCATAACCGCCGCAC‑CGGGTCCCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTg                                                                    <  1:347792/144‑1 (MQ=255)

                                                                              cccGCTTTGCTCCCAGGTGTTTGTTTTCGTTGTCTTTTTCCACCCTCGCGTCACAAATGGCGAAC‑GGGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTg                                                                    <  1:128658/148‑1 (MQ=255)

                                                                               ccGCTTTTCTACCAGGGGATTTTTTTCGATGTCTGTTTCCACCCTCTAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGt                                                                   <  2:2383294/148‑1 (MQ=255)

                                                                                cGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTc                                                                  >  2:1440998/1‑148 (MQ=255)

                                                                                     tGCTACCACGGGATTGTTTTCGCTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCAt                                                             <  2:3029688/148‑1 (MQ=255)

                                                                                     tGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCAt                                                             <  2:3028161/148‑1 (MQ=255)

                                                                                       cTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCCGGTGCGCACACTAAAAAAACCCAACAGATTTTACGTCTTGAAGATAGTCCGCCCCAGCCGCAAAAACAGTTTTACGCCGGTCAGCATca                                                           >  1:908424/1‑147 (MQ=255)

                                                                                       cTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGCCAGAAAATGCGCAA‑CCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATct                                                           <  2:2471212/148‑1 (MQ=255)

                                                                                          ccACGGGTTTGTTTGCGATGTCTGTTTCCACCCTCGAGTCATAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATctgct                                                        <  2:3276229/148‑1 (MQ=255)

                                                                                           cACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCGGTTGCGCAGACTCAAAACACCGAACAGATTTACCGTCGTGAAGATAGTCCCCCCCGTCCTCAAACCCAGTTTGGCGCCGGTCAGCaaatgcgg                                                       >  1:2649548/1‑141 (MQ=255)

                                                                                             cGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAAAAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAAACCTGTTTTCCGCCAGTCAGCATATGCTGGc                                                     >  1:2050944/1‑148 (MQ=255)

                                                                                             cGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACACAAAAAAGCGAACAGATTTAACGTCTTGAAGATAGTCCCCCGCTTCCTCAAACCCTGTTTGCCGCCGGTCAGCATCAGCGGGc                                                     >  1:1114758/1‑148 (MQ=255)

                                                                                                gtttGTTTGCGTGGTGTGTTGCCCCCCTCGAGTCACAAACGGCGCCC‑CGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAt                                                  <  1:2161124/146‑1 (MQ=255)

                                                                                                gATTGTTTTCGATGTCTGTTTCCACCCGCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGAt                                                  <  2:3454540/148‑1 (MQ=255)

                                                                                                 aTTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATg                                                 >  2:931435/1‑148 (MQ=255)

                                                                                                  ttGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAC‑CCGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGGCTTGAAGATCGTCCGCCGCGTCCTCAAAACCGGTTTGCCGCCGGGCAGCATCTGCTGGGGATGt                                                >  1:149653/1‑148 (MQ=255)

                                                                                                  ttGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGt                                                <  1:2312058/148‑1 (MQ=255)

                                                                                                  ttGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCCGTTGCGCAGACTCAAAACACCCAACAGATTTACCGTCTTGAAGATAGTCCGCCGCTTCCGCAAACCCGGTTTGCCGCCGGTCAGCAACTGCTGGCGATGt                                                >  1:844346/1‑148 (MQ=255)

                                                                                                    gTTTTCGTTGTCGGTAACCCCCCTCGAGACACAAAAGGCGCAA‑CGGGGCGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTc                                              <  1:1696130/148‑1 (MQ=255)

                                                                                                     ttttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCCGGTGCGCAGACTCAAAAAAGCGAACAGATTTAACCTCTTGTAGATCGTCCGCCGCGTCCTCAAACCCTGTTTTGCGCCGGTCAGCATATGCTGGCGCTGttgg                                             >  1:700633/1‑146 (MQ=255)

                                                                                                      tttCGTTGTCTGTTTCCACCCTCGAGTCATAAACTGCGCAC‑CGGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGt                                            <  1:2054129/148‑1 (MQ=255)

                                                                                                      tttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGt                                            >  2:1171451/1‑148 (MQ=255)

                                                                                                       ttCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGtt                                           >  2:1430959/1‑148 (MQ=255)

                                                                                                         cGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTAAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGc                                         >  2:72222/1‑148 (MQ=255)

                                                                                                           aTGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCCA‑CCGGTTGCGCAGACGCAAAACAGCGAACTGTTTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCGGTTTGCCGCCTGTCAGCATCAGCTGGCGAGTGTGGTTGCgg                                       >  1:19804/1‑148 (MQ=255)

                                                                                                                        cccTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCGTCCTCAAACCCGGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGTTCACGCCAgc                          >  1:524778/1‑148 (MQ=255)

                                                                                                                         ccTCGAGCAACAAAAGGCGCAC‑CCGGGCGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAgcg                         <  1:186240/148‑1 (MQ=255)

                                                                                                                            cGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                      <  2:2937204/148‑1 (MQ=255)

                                                                                                                            cGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTa                      <  2:400739/148‑1 (MQ=255)

                                                                                                                             gAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACACAAAAAAGCGAACAGATTTACCGTCTTGAAGAACGTCCGCCGCTTCCTCAAAACCAGTTTTCCGCCTGTCAGCATATGCTGGCGATGTTAGTTTCGGTGATAACGCCAGCGCTAt                     >  1:1720581/1‑148 (MQ=255)

                                                                                                                                tCAGAATCTGCGCAC‑CCGGTGGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTaa                  <  1:166672/148‑1 (MQ=255)

                                                                                                                                 cAGAAAATGCGCAC‑CCGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAAt                 <  1:760162/148‑1 (MQ=255)

                                                                                                                                    aaatggcgcAC‑CGGGTGGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTg              <  1:2228912/143‑1 (MQ=255)

                                                                                                                                    aaagTGCGCCA‑CGGTTCGCCCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTg              <  1:1034429/148‑1 (MQ=255)

                                                                                                                                     aaaTGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGc             <  2:1293731/148‑1 (MQ=255)

                                                                                                                                           gcAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGgcg       <  2:1587752/148‑1 (MQ=255)

                                                                                                                                           gcAA‑CCGGGTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGgcg       <  2:1586370/148‑1 (MQ=255)

                                                                                                                                              a‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTg    <  2:156708/148‑1 (MQ=255)

                                                                                                                                               cccGGTTCCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTg    <  1:66082/147‑1 (MQ=255)

                                                                                                                                                ccGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTgg   >  1:2407548/1‑148 (MQ=255)

                                                                                                                                                ccGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTgg   >  1:2425457/1‑148 (MQ=255)

                                                                                                                                                ccGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTgg   >  2:1154867/1‑148 (MQ=255)

                                                                                                                                                 cGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTggg  <  2:119244/148‑1 (MQ=255)

                                                                                                                                                 cGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCGGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTggg  <  2:2690623/148‑1 (MQ=255)

AAAGTGCATTTATCTCATTTAAATATTTAGATGAGGATGTGGCAAACGTTTGCTTTTCTCTTTCGGTCAGCTAAAATGCCCGCTTTGCTACCACGGGATTGTTTTCGATGTCTGTTTCCACCCTCGAGTCAGAAAATGCGCAA‑CCGGTTGCGCAGACTCAAAACAGCGAACTGATTTACCGTCTTGAAGATCGTCCGCCGCTTCCTCAAACCCTGTTTGCCGCCTGTCAGCATCTGCTGGCGATGTTCGTTGCGGTGATCACGCCAGCGCTATTAATCTGCCAGGCGCTGGG  >  CP009273/3822198‑3822489

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`