| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,923,028 | C→A | 100% | D476Y (GAC→TAC) | ravA ← | hexameric AAA+ MoxR family ATPase, putative molecular chaperone |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,923,028 | 0 | C | A | 97.3% | 566.9 / 6.3 | 184 | D476Y (GAC→TAC) | ravA | hexameric AAA+ MoxR family ATPase, putative molecular chaperone |
| Reads supporting (aligned to +/- strand): ref base C (2/3); new base A (76/103); total (78/106) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.06e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 185 total aligned reads displayed.
CAGCAGTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTCGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGCCTTGTAA > CP009273/3922883‑3923175 | agcagTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGcc < 1:3028104/148‑1 (MQ=255) agcagTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGcc > 1:1868849/1‑148 (MQ=255) cagTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAg < 2:261490/148‑1 (MQ=255) cagTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAg < 2:1580486/148‑1 (MQ=255) tGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGa > 2:2758556/1‑148 (MQ=255) gatgatCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATaa < 1:2672004/148‑1 (MQ=255) gatgatCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATaa < 1:3487003/148‑1 (MQ=255) tgatCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAAc > 2:2249289/1‑148 (MQ=255) atcatcTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAg < 2:1283802/148‑1 (MQ=255) atcatcTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAg < 2:1136521/148‑1 (MQ=255) catcTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGAc > 1:425294/1‑148 (MQ=255) atcTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACa < 2:1691984/148‑1 (MQ=255) tctTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACAttt < 1:3478584/148‑1 (MQ=255) tctTAGATCAATCCCTCTTCGCTGACGGACAGAATCTCATTTAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCAGCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACAttt < 1:3079145/148‑1 (MQ=255) gATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCt < 2:1024374/148‑1 (MQ=255) aTCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTg < 2:2044149/148‑1 (MQ=255) aTCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCg > 1:715649/1‑148 (MQ=255) aTCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCg < 1:72250/148‑1 (MQ=255) tCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGc < 1:2539763/148‑1 (MQ=255) ccTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTg < 1:3542351/148‑1 (MQ=255) ctctTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGa < 2:3384063/148‑1 (MQ=255) ctTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAAt > 2:3501977/1‑148 (MQ=255) ctTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAAt > 2:100652/1‑148 (MQ=255) ttCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATa < 1:242995/148‑1 (MQ=255) ttCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATa < 1:951623/148‑1 (MQ=255) cTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGc < 1:1151726/148‑1 (MQ=255) tGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCg < 2:592148/148‑1 (MQ=255) cGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCgtgt < 1:3056874/148‑1 (MQ=255) gCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttg > 1:2668520/1‑148 (MQ=255) gCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGGGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttg < 2:1265084/148‑1 (MQ=255) ccAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttgc < 1:1561858/148‑1 (MQ=255) ccAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttgc < 2:3490229/148‑1 (MQ=255) ccAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttgc < 1:503758/148‑1 (MQ=255) ccAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttgc > 2:1734045/1‑148 (MQ=255) aGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttgctt > 1:1981107/1‑148 (MQ=255) cATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGttgcttgc > 2:370131/1‑148 (MQ=255) aTCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTgcg < 2:2618119/148‑1 (MQ=255) tCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTgcgc > 2:611751/1‑148 (MQ=255) tCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTgcgc > 2:92338/1‑148 (MQ=255) ttAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTc > 1:259370/1‑148 (MQ=255) aaGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGc < 2:1376235/148‑1 (MQ=255) aaGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGc < 1:2863792/148‑1 (MQ=255) aaGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTAGc < 1:2426283/148‑1 (MQ=255) aaGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTAGc < 1:3264280/148‑1 (MQ=255) tATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCa < 1:492357/148‑1 (MQ=255) aTCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCaa > 1:3500499/1‑148 (MQ=255) aTCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCaa > 2:2767073/1‑148 (MQ=255) aTCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCaa < 1:1791490/148‑1 (MQ=255) tCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAg < 2:2564858/148‑1 (MQ=255) ccAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGc < 1:2567961/148‑1 (MQ=255) gCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGctct > 2:945313/1‑148 (MQ=255) cGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCtt > 2:134352/1‑148 (MQ=255) gTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTc < 1:475930/148‑1 (MQ=255) tAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCa > 2:3267353/1‑148 (MQ=255) aGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAg < 2:1283938/148‑1 (MQ=255) gCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgt < 1:3167727/148‑1 (MQ=255) gCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgt > 2:3171521/1‑148 (MQ=255) cATTGTTGTGCCTGGCGAATCTGTGCACCGTCATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgtt > 1:3149479/1‑148 (MQ=255) ttgttgTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgt < 2:599394/148‑1 (MQ=255) ttgttgTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgt < 2:2201853/148‑1 (MQ=255) ttgttgTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgt < 2:303605/148‑1 (MQ=255) ttgttgTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgt < 1:2398408/148‑1 (MQ=255) gttgtGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgttg < 2:250781/148‑1 (MQ=255) ttgtGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgttgt > 2:29901/1‑148 (MQ=255) tgtgCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgttgtt < 1:2217556/148‑1 (MQ=255) tgtgCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAgttgttgtt < 2:544160/148‑1 (MQ=255) tGGCTAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTAttt > 2:3407241/1‑148 (MQ=255) tGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTAttt > 2:711687/1‑148 (MQ=255) gCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCa > 2:1451931/1‑148 (MQ=255) gCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCa < 1:3316686/148‑1 (MQ=255) cGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCAc > 1:1103215/1‑148 (MQ=255) aaTCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCa < 2:2448221/148‑1 (MQ=255) cTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTCGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGc < 1:1813075/148‑1 (MQ=255) cTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGc > 2:1207796/1‑148 (MQ=255) cTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGc > 2:1207640/1‑148 (MQ=255) tgtgCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCa > 2:496070/1‑148 (MQ=255) gtgCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAg < 2:2562446/148‑1 (MQ=255) gtgCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAg < 2:1868849/148‑1 (MQ=255) tgCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGa < 2:2146240/148‑1 (MQ=255) cACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTCGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGAcc < 2:2070887/148‑1 (MQ=255) cGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTc < 1:2058343/148‑1 (MQ=255) cATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGc > 2:544814/1‑148 (MQ=255) tGTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATg < 2:1192452/148‑1 (MQ=255) gTAGGCTGGCTTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGa < 1:1194331/148‑1 (MQ=255) gctggctTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCg > 2:3002509/1‑148 (MQ=255) gctggctTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCAACAGGCAGACCTTCAGCCGATGAACCg > 2:3002426/1‑148 (MQ=255) gctggctTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTAACCAGGCAGACCTTCAGCCGATGAACCg > 1:766894/1‑148 (MQ=255) ctTCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATATAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAg < 1:1538893/148‑1 (MQ=255) tCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTg > 1:878556/1‑148 (MQ=255) tCAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCGGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTg > 1:2604892/1‑148 (MQ=255) cAATGCGACCTAACCAGTAGCCAGGTATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGc < 1:3342117/148‑1 (MQ=255) cAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGc > 2:2288324/1‑148 (MQ=255) cAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGc > 2:501267/1‑148 (MQ=255) cAATGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGc < 1:3342597/148‑1 (MQ=255) aTGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCa > 1:848875/1‑148 (MQ=255) tGCGACCTAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAg > 2:1902296/1‑148 (MQ=255) tAACCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTg > 2:1699266/1‑148 (MQ=255) aCCAGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGcc < 1:2683036/148‑1 (MQ=255) aGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGCCTTg > 1:1350297/1‑148 (MQ=255) aGTAGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGCCTTg > 2:2837309/1‑148 (MQ=255) | CAGCAGTGCGATGATCATCTCTTCGATCAATCCCTCTTCGCTGACGGCCAGCATCACATTAAGCGTATCCAGCGTTAGCATTGTTGTGCCTGGCGAATCTGTGCACCGACATCCTGTAGGCTGGCTTCAATGCGACCTAACCAGTCGCCAGGGATAAACAGACATTTTTGCTGTTCGCTGAATAAAGCGTGTTGCTTGCGCCAGTCGCTTTCAAGCTCTTCCAGTTGTTGTTTTATTTCACCAGGCAGACCTTCAGCCGATGAACCGGGAAGTGCCAGCGTACTGCCTTGTAA > CP009273/3922883‑3923175 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |