| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,927,972 | G→T | 93.0% | E279* (GAA→TAA) | rbsA → | fused D‑ribose transporter subunits of ABC superfamily: ATP‑binding components |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,927,972 | 0 | G | T | 93.0% | 597.0 / 36.0 | 216 | E279* (GAA→TAA) | rbsA | fused D‑ribose transporter subunits of ABC superfamily: ATP‑binding components |
| Reads supporting (aligned to +/- strand): ref base G (7/8); new base T (107/94); total (114/102) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.90e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.56e-01 | |||||||||||
Only 100 of 216 total aligned reads displayed.
AGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGCAA > CP009273/3927827‑3928116 | aGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGaa < 1:3521328/148‑1 (MQ=255) ttCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAAtt > 1:65570/1‑148 (MQ=255) ttCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAAtt < 2:20591/148‑1 (MQ=255) cGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCt < 2:1065016/148‑1 (MQ=255) cGCTGAGTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCt < 2:2265821/148‑1 (MQ=255) gATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGc > 2:2432451/1‑148 (MQ=255) gATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTAACTTTACGCAAAGGCTAAATTCTTGGc > 2:2945405/1‑148 (MQ=255) aTTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCg > 2:3342669/1‑148 (MQ=255) ttGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGt < 2:645848/148‑1 (MQ=255) tGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATATCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGtc < 2:2614810/148‑1 (MQ=255) gatgatGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTctct < 1:1198436/148‑1 (MQ=255) gatgatGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTctct < 2:2238478/148‑1 (MQ=255) tgatgGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTgg < 1:1571588/148‑1 (MQ=255) ggtggGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTg > 2:3272569/1‑148 (MQ=255) ggtggGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTg > 1:2091057/1‑148 (MQ=255) gtggGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTATCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGa > 2:1390349/1‑148 (MQ=255) tggGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGAt > 2:2375257/1‑148 (MQ=255) tggGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGAt < 2:3440950/148‑1 (MQ=255) gTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATggg > 1:3268061/1‑148 (MQ=255) cGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGgcg > 1:1032428/1‑148 (MQ=255) gCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGt > 2:2804793/1‑148 (MQ=255) cTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTc > 2:2566810/1‑148 (MQ=255) gAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTa < 2:1064229/148‑1 (MQ=255) aaGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTAc > 2:3214229/1‑148 (MQ=255) gATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCg > 1:963071/1‑148 (MQ=255) gATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTAAGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCg > 1:1048266/1‑148 (MQ=255) aTCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAAGCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGa > 2:2085265/1‑148 (MQ=255) atatCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACtg < 1:2021673/148‑1 (MQ=255) atatCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACtg < 2:884987/148‑1 (MQ=255) ccGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACtgatga > 1:3323104/1‑148 (MQ=255) ccGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACtgatga > 1:345373/1‑148 (MQ=255) ccGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACtgatga < 1:1556594/148‑1 (MQ=255) ccTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTg > 2:702377/1‑148 (MQ=255) ccTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTg > 2:702292/1‑148 (MQ=255) ccTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTg > 1:1453836/1‑148 (MQ=255) tGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGct < 2:553168/148‑1 (MQ=255) tGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGct > 1:2503761/1‑148 (MQ=255) tGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGct > 2:2546275/1‑148 (MQ=255) tGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGct > 2:2613273/1‑148 (MQ=255) tGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGct < 2:1768127/148‑1 (MQ=255) ggACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGctc > 1:232111/1‑148 (MQ=255) ggACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGctc < 2:2723049/148‑1 (MQ=255) ggACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGctc < 2:2723181/148‑1 (MQ=255) aCAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTa < 1:1910317/148‑1 (MQ=255) aCAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTa < 2:612034/148‑1 (MQ=255) aaaGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACg < 2:1483057/148‑1 (MQ=255) aaaGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACg > 2:2665862/1‑148 (MQ=255) aGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGgc > 1:3233204/1‑148 (MQ=255) gcgcCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGgcg < 2:1596518/148‑1 (MQ=255) gcgcCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGgcg > 1:1079838/1‑148 (MQ=255) cgcCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGgcgc > 2:3098461/1‑148 (MQ=255) cGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACt > 2:1990574/1‑148 (MQ=255) gggAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTa < 1:868025/148‑1 (MQ=255) gggAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTa < 1:2336039/148‑1 (MQ=255) agaTATCCGCCTGAAAGTCGATAATCTCTGTGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACcg < 2:2963849/148‑1 (MQ=255) tCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCAc < 1:1358157/148‑1 (MQ=255) gAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGt < 1:2210021/148‑1 (MQ=255) aaaGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGtt > 2:2022005/1‑148 (MQ=255) cGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTc > 2:2892464/1‑148 (MQ=255) gATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCa < 2:2766063/148‑1 (MQ=255) aTAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCAc > 2:2776956/1‑148 (MQ=255) tAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCACAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCAcc < 1:2778227/148‑1 (MQ=255) tAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCAcc < 2:1131289/148‑1 (MQ=255) tAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCAcc > 1:2332082/1‑148 (MQ=255) aaTCTCTGCGGACCTGGCGTTAACGATGTATCTTTTACTTTACGCAAAGGCTAAATTCGTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGCACAGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCAccc > 1:1019078/1‑148 (MQ=255) ctctGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTgg < 1:3009557/148‑1 (MQ=255) ctctGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTgg < 1:805404/148‑1 (MQ=255) tGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATg < 2:387365/148‑1 (MQ=255) cTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGa < 2:3402455/148‑1 (MQ=255) cTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGa > 2:1517172/1‑148 (MQ=255) tGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATTGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGATACGTCACCCTGGATGGGCATGaa > 2:2012100/1‑148 (MQ=255) tGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGaa > 1:707593/1‑148 (MQ=255) cGTTAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTc > 1:2283133/1‑148 (MQ=255) ttAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGt > 1:2687545/1‑148 (MQ=255) tAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGtt > 1:2893056/1‑148 (MQ=255) tAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGtt > 2:1318288/1‑148 (MQ=255) tAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGtt > 1:1598955/1‑148 (MQ=255) tAACGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGAGGGGCATGAAGTCGtt > 2:1942490/1‑148 (MQ=255) cGATGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTAcc < 1:397099/148‑1 (MQ=255) aTGTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCg < 2:3223837/148‑1 (MQ=255) gTCTCTTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGtt > 2:2556975/1‑148 (MQ=255) tctcTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTc < 2:3082606/148‑1 (MQ=255) ctctTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCa > 1:944247/1‑148 (MQ=255) ctctTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCa > 2:1646760/1‑148 (MQ=255) ctctTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCa > 1:3115583/1‑148 (MQ=255) ctctTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCa > 2:2146790/1‑148 (MQ=255) tctTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCAc < 1:2694734/148‑1 (MQ=255) tctTTTACTTTACGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCAc < 1:1327030/148‑1 (MQ=255) tttactttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGc < 1:2375257/148‑1 (MQ=255) ttactttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCa > 2:3461435/1‑148 (MQ=255) tactttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAg > 1:1396685/1‑148 (MQ=255) ctttacGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGa > 1:1283169/1‑148 (MQ=255) tttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGAt < 2:3527225/148‑1 (MQ=255) tttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGAt > 1:2334427/1‑148 (MQ=255) tttacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGAt > 1:473231/1‑148 (MQ=255) tacGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATgg < 1:1253688/148‑1 (MQ=255) acGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGc < 2:1181836/148‑1 (MQ=255) acGCAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGc < 1:314275/148‑1 (MQ=255) cAAAGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTg < 2:233785/148‑1 (MQ=255) aGGCTAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGCa > 1:2831884/1‑148 (MQ=255) | AGATTCGCTGATTGAGATGATGGTGGGTCGCAAGCTGGAAGATCAATATCCGCACCTGGACAAAGCGCCGGGAGATATCCGCCTGAAAGTCGATAATCTCTGCGGACCTGGCGTTAACGATGTCTCTTTTACTTTACGCAAAGGCGAAATTCTTGGCGTCTCTGGTTTGATGGGCGCAGGTCGTACCGAACTGATGAAAGTGCTCTACGGCGCACTACCGCGCACCAGCGGTTACGTCACCCTGGATGGGCATGAAGTCGTTACCCGTTCACCGCAGGATGGCCTGGCAA > CP009273/3927827‑3928116 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |