| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,035,421 | G→T | 93.7% | intergenic (‑62/‑8) | mobA ← / → yihD | molybdopterin‑guanine dinucleotide synthase/DUF1040 protein YihD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,035,421 | 0 | G | T | 93.7% | 539.5 / 27.1 | 190 | intergenic (‑62/‑8) | mobA/yihD | molybdopterin‑guanine dinucleotide synthase/DUF1040 protein YihD |
| Reads supporting (aligned to +/- strand): ref base G (4/8); new base T (95/83); total (99/91) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.36e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
AAGCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGAC > CP009273/4035276‑4035565 | aaGCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCa > 1:2213420/1‑148 (MQ=255)aaGCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCa < 2:695996/148‑1 (MQ=255) gCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGatcatc < 1:2344304/148‑1 (MQ=255) gCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGatcatc > 1:556340/1‑148 (MQ=255) cAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAtcatca < 1:449533/148‑1 (MQ=255) tCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTa < 1:86789/148‑1 (MQ=255) tCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTa > 1:3056209/1‑148 (MQ=255) tCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTa < 2:3425225/148‑1 (MQ=255) ttATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTCGGATTGACCCTGCTAACGTGTCTGTCTCAGGAGTAAGGATCATCACTATGaa < 1:1173668/148‑1 (MQ=255) aTCTACGCCGCCCTTTCGTCTGGCTTTACCGCCTGCCAGCACAACGACTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAAt < 2:3515495/148‑1 (MQ=255) aTCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAAt < 1:1650618/148‑1 (MQ=255) cTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGt > 2:3190335/1‑148 (MQ=255) tACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTa < 1:3143077/148‑1 (MQ=255) aCGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGGTCATCACTATGAAATGTaa > 2:2663030/1‑148 (MQ=255) cgccgcCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAAAGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTaaa > 1:1325017/1‑148 (MQ=255) cgccCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGt < 1:2023131/148‑1 (MQ=255) cATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCtga > 2:1188511/1‑148 (MQ=255) aTTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCtgaa > 1:102443/1‑148 (MQ=255) aTTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAAAGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAAAGTCtgaa > 1:2876002/1‑148 (MQ=255) ttCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCtgaat > 1:832164/1‑148 (MQ=255) tCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCtgaatg > 2:2526531/1‑148 (MQ=255) tCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCtgaatg > 2:737579/1‑148 (MQ=255) tCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAg > 2:433118/1‑148 (MQ=255) cTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGt < 1:715814/148‑1 (MQ=255) ggCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTa > 2:1614129/1‑148 (MQ=255) cTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTAtt > 2:2391415/1‑148 (MQ=255) ttACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGa > 2:1737338/1‑148 (MQ=255) ttACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGa > 2:227801/1‑148 (MQ=255) tACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGaa < 2:616765/148‑1 (MQ=255) tACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGaa < 2:2827311/148‑1 (MQ=255) tACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGaa < 1:433839/148‑1 (MQ=255) tACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGaa < 2:2003100/148‑1 (MQ=255) tACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGaa < 2:2003286/148‑1 (MQ=255) ccGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAAct < 1:675/148‑1 (MQ=255) ccGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAAct > 2:258391/1‑148 (MQ=255) cGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATGCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAActc > 1:3378219/1‑148 (MQ=255) cTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAActcctc < 1:461517/148‑1 (MQ=255) cAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTccagc < 1:251448/148‑1 (MQ=255) aGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGGTATTGAACTCCTccagcc > 2:2138557/1‑148 (MQ=255) acaACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCcagccagc < 2:166814/148‑1 (MQ=255) cGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTgg > 1:1184143/1‑148 (MQ=255) gCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTTGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTTAATGAAGTTATTTAACTCCACCATCCAGCCAGGc > 1:3384521/1‑148 (MQ=255) aTCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAaga < 2:1482429/148‑1 (MQ=255) catcaGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGAcc > 2:2254628/1‑148 (MQ=255) catcaGAGTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGAcc < 2:375821/148‑1 (MQ=255) atcaGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCt < 1:1948781/148‑1 (MQ=255) tcaGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAGGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCtt > 1:1812126/1‑148 (MQ=255) tcaGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCtt > 1:1457642/1‑148 (MQ=255) aGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTTTCTTTCTCAAGATTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTaa < 1:3291546/148‑1 (MQ=255) aGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTaa < 2:685385/148‑1 (MQ=255) ttCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACct > 2:852902/1‑148 (MQ=255) cACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACctgc > 1:3131369/1‑148 (MQ=255) ccGATATCGCCTCGTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACctgctg > 1:324445/1‑148 (MQ=255) cGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCtgctgc > 2:770874/1‑148 (MQ=255) gATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCa < 1:1066591/148‑1 (MQ=255) tatCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAt > 2:3350808/1‑148 (MQ=255) tatCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAt > 2:3414174/1‑148 (MQ=255) tatCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAt > 2:1117947/1‑148 (MQ=255) tCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAttt > 1:3476452/1‑148 (MQ=255) cGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAtttt > 2:3449411/1‑148 (MQ=255) cGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAtttt > 2:1016559/1‑148 (MQ=255) gCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCAGGCAAAAAGAGCCAGACCTTAACCTGCTGCAAttttt > 2:3279729/1‑148 (MQ=255) ccTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTg > 1:716910/1‑148 (MQ=255) ctctTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGc > 2:2996960/1‑148 (MQ=255) ctctTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGc < 1:3442913/148‑1 (MQ=255) tctTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCa < 2:1073488/148‑1 (MQ=255) tttATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGaa < 1:2752251/148‑1 (MQ=255) ttATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGaaa > 2:71135/1‑148 (MQ=255) aTTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACt < 1:1112589/148‑1 (MQ=255) ttGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTg > 2:457025/1‑148 (MQ=255) ttGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTg > 2:607200/1‑148 (MQ=255) ttGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTg < 1:1217831/148‑1 (MQ=255) tgtgGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTgg < 2:2425178/148‑1 (MQ=255) tgtgGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTgg < 2:1593911/148‑1 (MQ=255) gtgGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGc < 2:1347310/148‑1 (MQ=255) gggATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGa > 1:1595085/1‑148 (MQ=255) aTTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAag > 2:305196/1‑148 (MQ=255) ttGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAaga > 1:92650/1‑148 (MQ=255) ttGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAaga < 2:556340/148‑1 (MQ=255) aCCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCCATTGTTGCAGAAACTGGCGCACGAGTc > 2:1865217/1‑148 (MQ=255) aCCCTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTc > 2:1865195/1‑148 (MQ=255) cccTGCTAACGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCa < 2:1347988/148‑1 (MQ=255) aCGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGa > 1:2272732/1‑148 (MQ=255) aCGTGTCTGTCTCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGa > 1:2661212/1‑148 (MQ=255) gtctgtctCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGc > 2:3315760/1‑148 (MQ=255) tctgtctCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCg > 2:1315336/1‑148 (MQ=255) tgtctCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGaa < 1:524074/148‑1 (MQ=255) gtctCAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAAc < 2:2294936/148‑1 (MQ=255) tctcAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACt < 1:2549632/148‑1 (MQ=255) cAAGAGTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGc > 2:432096/1‑148 (MQ=255) agagTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCgg < 1:2286959/148‑1 (MQ=255) gagTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGa > 2:1721738/1‑148 (MQ=255) gagTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGa > 2:2724258/1‑148 (MQ=255) agTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGAt < 1:737579/148‑1 (MQ=255) agTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGAt < 1:2974413/148‑1 (MQ=255) agTAAGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGAt < 2:2747513/148‑1 (MQ=255) aaGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTg < 2:1457642/148‑1 (MQ=255) aGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGa < 1:2663030/148‑1 (MQ=255) aGGATCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGa > 2:3149593/1‑148 (MQ=255) ggAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGAc > 1:1552112/1‑148 (MQ=255) | AAGCAATCCTTTATCTACGCCGCCCATTCGTCTGGCTTTACCGCCTGCCAGCACAACGCCTGTTATCGTCGTCATCAGATTCACCGATATCGCCTCTTTTATTGTGGGATTGACCCTGCTAACGTGTCTGTCTCAAGAGTAAGGAGCATCACTATGAAATGTAAACGTCTGAATGAAGTTATTGAACTCCTCCAGCCAGCCTGGCAAAAAGAGCCAGACCTTAACCTGCTGCAATTTTTGCAGAAACTGGCGAAAGAGTCAGGTTTTGACGGCGAACTGGCGGATTTGAC > CP009273/4035276‑4035565 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |