| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,117,657 | G→T | 54.4% | R56S (CGC→AGC) | yiiX ← | putative lipid binding hydrolase, DUF830 family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,117,657 | 0 | G | T | 54.4% | 11.3 / 292.3 | 180 | R56S (CGC→AGC) | yiiX | putative lipid binding hydrolase, DUF830 family protein |
| Reads supporting (aligned to +/- strand): ref base G (39/43); new base T (61/37); total (100/80) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.20e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 | |||||||||||
Only 100 of 184 total aligned reads displayed.
GCGCCAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGAT > CP009273/4117510‑4117804 | gcgcCAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCg < 2:1148426/148‑1 (MQ=255) ccAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTAt > 1:2265369/1‑148 (MQ=255) ccAGTTTTTGCTGGTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTAt < 2:1993016/148‑1 (MQ=255) cAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATc > 2:2451471/1‑148 (MQ=255) gTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCAc > 1:2716064/1‑148 (MQ=255) tttttGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCAcc < 1:1025884/148‑1 (MQ=255) tttttGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCAcc < 1:1026145/148‑1 (MQ=255) tttttGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCAcc < 1:3543643/148‑1 (MQ=255) ttGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGc < 2:1576054/148‑1 (MQ=255) ttGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGc < 2:2831706/148‑1 (MQ=255) ttGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGc < 2:2843131/148‑1 (MQ=255) gtGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGc < 2:2831734/147‑1 (MQ=255) tgttgtTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTAGGTGCCATTTTCACACTTTGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATAc > 1:3489461/1‑148 (MQ=255) tgttCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCgg > 2:1880233/1‑148 (MQ=255) ttCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTGTTTGTTGCGTATCACCAGCATACCGgtg > 2:397054/1‑148 (MQ=255) cAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGtgtg < 1:2908187/148‑1 (MQ=255) cAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGtgtg < 1:2907810/148‑1 (MQ=255) cAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTGTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGtgtg < 1:3304105/148‑1 (MQ=255) aaCACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTgg < 2:524111/148‑1 (MQ=255) aaCACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTgg < 1:2997358/148‑1 (MQ=255) acacTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGc > 1:1508940/1‑148 (MQ=255) cacTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCt < 1:2766048/148‑1 (MQ=255) cacTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCt > 1:2427020/1‑148 (MQ=255) cacTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCt > 1:2743595/1‑148 (MQ=255) cTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCtat < 2:881783/148‑1 (MQ=255) cAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATaa > 2:576343/1‑148 (MQ=255) cGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGt < 2:1194243/148‑1 (MQ=255) cTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATg < 1:102296/148‑1 (MQ=255) cTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATg < 1:102301/148‑1 (MQ=255) tCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATggg > 1:1632345/1‑148 (MQ=255) tCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATggg > 2:664104/1‑148 (MQ=255) tCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATggg > 1:636365/1‑148 (MQ=255) aCGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCg > 2:3218926/1‑148 (MQ=255) acaacGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGa < 1:582655/148‑1 (MQ=255) acGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCg > 1:3447119/1‑148 (MQ=255) acGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCg > 1:3224564/1‑148 (MQ=255) tATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCtt > 2:1060449/1‑148 (MQ=255) aTTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCttt < 1:2030973/148‑1 (MQ=255) aTTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCttt < 1:165169/148‑1 (MQ=255) tttGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGTGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTa > 1:266245/1‑148 (MQ=255) tttGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGTGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTa > 1:777036/1‑148 (MQ=255) tttGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTa > 2:242099/1‑148 (MQ=255) tttGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTa < 1:170241/148‑1 (MQ=255) ttGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTAc > 2:888243/1‑148 (MQ=255) ttGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTAc < 1:690349/148‑1 (MQ=255) tGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACt < 2:802764/148‑1 (MQ=255) gCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACtt < 2:3246717/148‑1 (MQ=255) gCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACtt < 2:1480399/148‑1 (MQ=255) ccTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTg < 2:1211567/148‑1 (MQ=255) ttttCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCg > 1:1545881/1‑148 (MQ=255) ttCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGAt < 2:1633198/148‑1 (MQ=255) cACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGa < 2:363713/148‑1 (MQ=255) ccATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGc > 2:1171737/1‑148 (MQ=255) cATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCg > 1:2982295/1‑148 (MQ=255) cATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCg > 2:2991518/1‑148 (MQ=255) aTCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCt < 2:2290250/148‑1 (MQ=255) aTCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCt > 2:500612/1‑148 (MQ=255) tCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTg > 2:1197666/1‑148 (MQ=255) aCTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGaaa > 2:2809054/1‑148 (MQ=255) tGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAga < 2:1969477/148‑1 (MQ=255) tGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAgatgat > 1:2160748/1‑148 (MQ=255) tGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAgatgat > 2:239447/1‑148 (MQ=255) tGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAgatgat > 1:2163545/1‑148 (MQ=255) tGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAgatgat > 2:1339690/1‑148 (MQ=255) tGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAgatgat > 2:3108928/1‑148 (MQ=255) gAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGatgatg < 1:1083247/148‑1 (MQ=255) gAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGatgatg < 1:1198236/148‑1 (MQ=255) cGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCg > 2:1730133/1‑148 (MQ=255) gtATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGtt < 2:3510480/148‑1 (MQ=255) ttCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTtgtg > 1:1204363/1‑148 (MQ=255) tCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTgg < 1:280091/148‑1 (MQ=255) ggCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCGTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCa > 2:3184554/1‑148 (MQ=255) ggCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCa > 1:470469/1‑148 (MQ=255) aCTGCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCaa < 1:2444126/148‑1 (MQ=255) gCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAgg < 2:2716241/148‑1 (MQ=255) gCTTCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAgg < 2:939467/148‑1 (MQ=255) ttCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCa < 2:266245/148‑1 (MQ=255) ttCAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCa < 2:777036/148‑1 (MQ=255) ttCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCa > 1:1624760/1‑148 (MQ=255) cAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAgg < 2:652641/148‑1 (MQ=255) cAAAAACGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAgg > 2:2036285/1‑148 (MQ=255) aaaCGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTAc > 2:2074153/1‑148 (MQ=255) aaaCGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTAc > 2:278479/1‑148 (MQ=255) aaaCGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTAc > 2:2074160/1‑148 (MQ=255) aCGTAGGGCTTTATGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAg > 2:2123594/1‑148 (MQ=255) cGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGa > 1:935883/1‑148 (MQ=255) cGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGa > 2:3527414/1‑148 (MQ=255) cGTAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGa > 1:1945002/1‑148 (MQ=255) tAGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGaaa > 2:2932683/1‑148 (MQ=255) tAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGaaa > 1:1247173/1‑148 (MQ=255) aGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAAc > 1:2183046/1‑148 (MQ=255) aGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAAc < 1:94959/148‑1 (MQ=255) aGGGCTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAAc > 1:1523303/1‑148 (MQ=255) ggCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACca > 1:2704153/1‑148 (MQ=255) cTTTTTGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACcagc > 2:465690/1‑148 (MQ=255) tttGTTGCTTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATTATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAgg < 1:1171737/148‑1 (MQ=255) tttGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAgg < 2:2427020/148‑1 (MQ=255) gCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAgg < 2:1743451/148‑1 (MQ=255) cGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGa < 2:2435250/148‑1 (MQ=255) gTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGAt < 2:636365/148‑1 (MQ=255) | GCGCCAGTTTTTGCTGTTGTTCAACACTCAGTCCGCCTTCAACGCGGCGAACAACGTATTTGCCCTTTTCACCATGGGCGATCCACTGCTTGAGCGGGGTGTATTTCACCGGGCCGACTGCTTCAAAAACGTAGGGCTTTTTGTTGCGTATCACCAGCATACCGGTGTGGCTATAATCGGTATGGGTCGCCAGTTGGATCGCTTTACTTTGCGATGAGCGAGAGATCTGAAAGATGATGTCGCCGGTTTGTGGCTGCCAGGCAAAGGCAGGTACAGAAACCAGCAGGCTGAGGAT > CP009273/4117510‑4117804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |