Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 4,183,103 | C→A | 11.3% | E134D (GAG→GAT) | thiF ← | adenylyltransferase, modifies ThiS C‑terminus |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 4,183,103 | 0 | C | A | 11.3% | 588.7 / 34.4 | 174 | E134D (GAG→GAT) | thiF | adenylyltransferase, modifies ThiS C‑terminus |
Reads supporting (aligned to +/- strand): ref base C (63/91); new base A (6/14); total (69/105) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 4.68e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 181 total aligned reads displayed.
TTGCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGAC > CP009273/4182957‑4183249 | ttGCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAAtct < 2:1268446/148‑1 (MQ=255) tGCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAAtctc > 1:269443/1‑148 (MQ=255) gCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCTTCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTcc < 2:2587192/148‑1 (MQ=255) gCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTcc < 2:3051479/148‑1 (MQ=255) cGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCt < 2:1229323/148‑1 (MQ=255) ttCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTgg > 2:1901825/1‑148 (MQ=255) gCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATATCCTGGCGAGt < 2:2390308/148‑1 (MQ=255) ccTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGACATTAATCTCCTGGCGAGTCGc > 1:2012105/1‑148 (MQ=255) ccTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGACATTAATCTCCTGGCGAGTCGc > 1:2012070/1‑148 (MQ=255) cTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGcc < 2:2722972/148‑1 (MQ=255) tATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATAtt < 1:1690222/148‑1 (MQ=255) tATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATAtt < 2:3274342/148‑1 (MQ=255) aTCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGACATTAATCTCCTGGCGAGTCGCCATATTg < 2:2033672/148‑1 (MQ=255) aTCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGACATTAATCTCCTGGCGAGTCGCCATATTg < 2:2033194/148‑1 (MQ=255) tCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGt < 2:3239232/148‑1 (MQ=255) tCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGt < 1:190237/148‑1 (MQ=255) tCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGt > 2:129369/1‑148 (MQ=255) cTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTc > 1:1758039/1‑148 (MQ=255) ggCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCgg < 1:3425649/148‑1 (MQ=255) aGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATATCCTGGCGAGTCGCCATATTGTCGGTACAGt < 1:3046756/148‑1 (MQ=255) gCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGc < 2:2386129/148‑1 (MQ=255) gTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATATCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGcacc > 2:3155227/1‑148 (MQ=255) aaCACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGcaccac > 2:3488687/1‑148 (MQ=255) acCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATc < 2:1422690/148‑1 (MQ=255) acCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATc < 2:1818330/148‑1 (MQ=255) acCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGACATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATc > 1:818366/1‑148 (MQ=255) cccTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCgg < 2:345082/148‑1 (MQ=255) cTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATATCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGcc < 1:2430594/148‑1 (MQ=255) tGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGccc > 2:2703536/1‑148 (MQ=255) gCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCg > 1:1733142/1‑148 (MQ=255) cccAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGc > 2:1055912/1‑148 (MQ=255) ccAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCa > 1:2378555/1‑148 (MQ=255) cAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGTGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCaa < 1:1068145/148‑1 (MQ=255) aGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAAc > 2:2421381/1‑148 (MQ=255) ggcgTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCAt < 2:3139824/148‑1 (MQ=255) ggcgTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATATCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCAt < 1:307299/148‑1 (MQ=255) tCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCttt < 1:2086167/148‑1 (MQ=255) cAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCtttt > 2:388260/1‑148 (MQ=255) cAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCtttt < 2:1571943/148‑1 (MQ=255) cAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCtttt > 2:3356120/1‑148 (MQ=255) aGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTa < 1:1571583/148‑1 (MQ=255) aGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTa < 1:1380074/148‑1 (MQ=255) aCCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACg > 1:3090953/1‑148 (MQ=255) aCCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACg > 1:3090113/1‑148 (MQ=255) cATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGcc > 2:1694812/1‑148 (MQ=255) aCTGACCGCAAAATCCGAACGCGCTGGCGGTCATAAGAGGCGTGTTGAGTGCCACGAAGGCGGCATTCATCTCATGGCGAGTCGCCATATTTTCGGTACAGTCTAGCACCACATCGGCCCGTGCAACCGCATCTTATAAAGCCTCAcc > 2:1925055/1‑148 (MQ=255) tGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCg < 2:1759496/148‑1 (MQ=255) gACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATATCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGt < 1:3556107/148‑1 (MQ=255) aCCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGtt > 2:917591/1‑148 (MQ=255) cGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTaa < 1:2705202/148‑1 (MQ=255) cGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTaa > 1:2765594/1‑148 (MQ=255) cGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTaa < 1:31307/148‑1 (MQ=255) cAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTGGCAACTGTCGAGCACGTCATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCg < 1:3489949/148‑1 (MQ=255) cAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATATCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCg < 2:123870/148‑1 (MQ=255) aaaTCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCGGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCgt < 2:2518797/148‑1 (MQ=255) aaTCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCgtt > 2:2471935/1‑148 (MQ=255) ccGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTaa > 2:78679/1‑148 (MQ=255) ccGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTaa > 2:2350505/1‑148 (MQ=255) gcgcTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATg < 1:2519411/148‑1 (MQ=255) cgcTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGc < 2:2098672/148‑1 (MQ=255) cTGGCGGTGATAAGCGGCGTTTTGAGTGCCACGCAGGCGGCATTAATATCCTGGCGAGTCGCCATATTGTCGGTACATTCGAGCAACACATCGGCCCGTGAAACCGCATCTTTTAACTCCTCACCCGTTAACCGTTGTTGTAATGCTg < 1:2757462/148‑1 (MQ=255) cTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTg < 2:105722/148‑1 (MQ=255) cTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTg < 2:1573634/148‑1 (MQ=255) tGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGt < 2:407797/148‑1 (MQ=255) tGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGt < 2:87529/148‑1 (MQ=255) ggCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTc > 2:1670974/1‑148 (MQ=255) gCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCa < 2:2613661/148‑1 (MQ=255) cGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAg < 2:1877174/148‑1 (MQ=255) gATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGa > 1:773870/1‑148 (MQ=255) tAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAAt < 2:488006/148‑1 (MQ=255) tAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAAt < 1:1741155/148‑1 (MQ=255) gcgTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCggg > 2:1524827/1‑148 (MQ=255) gcgTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCggg > 2:1380130/1‑148 (MQ=255) cgTGTTGAGTGCCACGCAGGCGACATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGa < 2:2012105/148‑1 (MQ=255) gtgtTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGAt < 2:3280737/148‑1 (MQ=255) tgtTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGAtt < 1:1901825/148‑1 (MQ=255) gtTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTc > 2:1169824/1‑148 (MQ=255) gtTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTGGTAATGCTGTCAGTTGAATGTCGGGATTc > 2:2941745/1‑148 (MQ=255) tGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCaa < 2:2151489/148‑1 (MQ=255) aGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACt < 1:667504/148‑1 (MQ=255) tGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGGTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACtgt > 1:3544171/1‑148 (MQ=255) tGCCACGCAGGCGGCATTAATATCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACtgt > 1:571542/1‑148 (MQ=255) tGCCACGCAGGCGGCATTAATATCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACtgt > 1:571461/1‑148 (MQ=255) ccACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTgtgt < 1:2602126/148‑1 (MQ=255) ccACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTgtgt < 1:3356120/148‑1 (MQ=255) aCGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCa < 1:1998324/148‑1 (MQ=255) cGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAg > 1:2210844/1‑148 (MQ=255) gCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGt > 1:1949851/1‑148 (MQ=255) gCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAAGGTCGGGATTCAACTGTGTCAGt < 2:269443/148‑1 (MQ=255) aGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCg < 2:561800/148‑1 (MQ=255) aGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCg < 1:1818870/148‑1 (MQ=255) gcggcATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCt > 1:2926418/1‑148 (MQ=255) gcggcATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCt > 1:1796419/1‑148 (MQ=255) gcATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGtt > 2:172266/1‑148 (MQ=255) ttAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGc < 1:129369/148‑1 (MQ=255) tAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCt > 1:373068/1‑148 (MQ=255) tctcCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGAc > 1:1493467/1‑148 (MQ=255) tctcCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGAc > 1:2456332/1‑148 (MQ=255) tctcCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGAc > 1:2456353/1‑148 (MQ=255) tctcCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGAc > 1:3206036/1‑148 (MQ=255) | TTGCGTTCTGGCTCCTGGTTATCTGGCCACAGGCAGCGGTAACACCCCTGCTCCCAGGGCGGCGTCAGTACCATCAACTGACCGCCAAATCCGACCGCGCTGGCGGTGATAAGCGGCGTGTTGAGTGCCACGCAGGCGGCATTAATCTCCTGGCGAGTCGCCATATTGTCGGTACAGTCGAGCACCACATCGGCCCGTGCAACCGCATCTTTTAACGCCTCACCCGTTAACCGTTGTTGTAATGCTGTCAGTTGAATGTCGGGATTCAACTGTGTCAGTCGCTGTTGGCTGAC > CP009273/4182957‑4183249 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |