| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,225,841 | A→C | 100% | K3T (AAA→ACA) | yjbE → | extracellular polysaccharide production threonine‑rich protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,225,841 | 0 | A | C | 99.1% | 831.5 / ‑3.7 | 207 | K3T (AAA→ACA) | yjbE | extracellular polysaccharide production threonine‑rich protein |
| Reads supporting (aligned to +/- strand): ref base A (2/0); new base C (129/76); total (131/76) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.33e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 214 total aligned reads displayed.
TTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTC > CP009273/4225696‑4225988 | ttGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAg > 1:2661902/1‑148 (MQ=255)ttGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAg < 1:384024/148‑1 (MQ=255) tGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGt < 1:325450/148‑1 (MQ=255) attcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTg > 1:2866981/1‑148 (MQ=255) attcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTg < 1:2570717/148‑1 (MQ=255) attcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTg < 1:789213/148‑1 (MQ=255) attcattcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTG‑TATGAAAACAGTTCTGt > 1:1092570/1‑148 (MQ=255) cattcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTAt > 2:3085061/1‑148 (MQ=255) attcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATg > 1:2764087/1‑148 (MQ=255) ttcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATgg < 2:1649560/148‑1 (MQ=255) ttcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATgg > 1:629229/1‑148 (MQ=255) tcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGc < 1:942425/148‑1 (MQ=255) tcCAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGc > 1:2430577/1‑148 (MQ=255) ccAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCa < 2:751660/148‑1 (MQ=255) ccAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCa < 2:2534090/148‑1 (MQ=255) cAATTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCAt < 2:2211916/148‑1 (MQ=255) aTTATCCTAACACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCAttt < 1:972135/148‑1 (MQ=255) aTTATCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCAttt < 1:2874567/148‑1 (MQ=255) aTCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTg < 2:2909392/148‑1 (MQ=255) aTCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTg > 1:1233889/1‑148 (MQ=255) tCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGc < 2:1725905/148‑1 (MQ=255) tCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGc > 2:3553389/1‑148 (MQ=255) tCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGc > 2:1299323/1‑148 (MQ=255) tCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGc > 1:2681385/1‑148 (MQ=255) tCCTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGc > 2:1299416/1‑148 (MQ=255) ccTAACCCGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGcc < 1:1589194/148‑1 (MQ=255) ccTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGcc < 2:2620126/148‑1 (MQ=255) ccTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGcc > 1:61285/1‑148 (MQ=255) cTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCa > 2:244029/1‑148 (MQ=255) cTAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCa < 1:3543011/148‑1 (MQ=255) tAAAACGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCat > 1:2822373/1‑148 (MQ=255) aCGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCt > 1:1029028/1‑148 (MQ=255) aCGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCt > 1:1001740/1‑148 (MQ=255) aCGCCATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCt > 1:306477/1‑148 (MQ=255) cATCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTgcgc < 2:2871357/148‑1 (MQ=255) tCGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCtt > 1:237932/1‑148 (MQ=255) cGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTg < 2:1430575/148‑1 (MQ=255) cGCTAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTg > 2:2769442/1‑148 (MQ=255) tAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcgg < 1:3465983/148‑1 (MQ=255) tAATTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTGTTTGGGTAAATCTCCATTGATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcgg > 2:2415809/1‑148 (MQ=255) aagtCCCCTCGCCGTAATTCGCATGCGTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcggc < 2:514393/145‑1 (MQ=255) aaTTCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTgcggc < 2:2346679/148‑1 (MQ=255) tCCCCTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGAc < 2:1246756/148‑1 (MQ=255) cccTCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACtt < 1:823209/148‑1 (MQ=255) tcgcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTg < 1:1433287/147‑1 (MQ=255) tcgcCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTg < 2:116827/147‑1 (MQ=255) ccGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGt > 2:2270292/1‑148 (MQ=255) cGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTg > 2:1353954/1‑148 (MQ=255) cGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTg > 2:3341517/1‑148 (MQ=255) aTTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCt > 2:3427195/1‑148 (MQ=255) gCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCAc < 2:746029/148‑1 (MQ=255) ttAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACa > 2:1692119/1‑148 (MQ=255) tAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAg < 2:2612402/148‑1 (MQ=255) ttGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTg > 1:1216048/1‑148 (MQ=255) tgtgTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTgg > 2:286789/1‑148 (MQ=255) tgtgTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTgg > 2:286423/1‑148 (MQ=255) tgtATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGc > 2:1118861/1‑148 (MQ=255) ataCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGaa > 1:879771/1‑148 (MQ=255) taCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAg < 1:2468701/148‑1 (MQ=255) aCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGc > 2:2651370/1‑148 (MQ=255) aCTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGc < 1:3008096/148‑1 (MQ=255) cTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCg < 1:785092/148‑1 (MQ=255) cTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCg < 1:1787083/148‑1 (MQ=255) tCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCgg < 2:2661902/148‑1 (MQ=255) gATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCa < 1:511944/148‑1 (MQ=255) ccgAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgc > 2:2850714/1‑148 (MQ=255) gAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcag > 2:3234794/1‑148 (MQ=255) gAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcag > 1:1757682/1‑148 (MQ=255) aaaTGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGgcagc > 2:3102929/1‑148 (MQ=255) aTGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCaa > 2:301309/1‑148 (MQ=255) tGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAAc > 1:2880924/1‑148 (MQ=255) ttttGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTc > 1:654837/1‑148 (MQ=255) ttttGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTc > 1:183853/1‑148 (MQ=255) ttGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCgg < 1:2043025/148‑1 (MQ=255) ttGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCgg < 1:244029/148‑1 (MQ=255) ttGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCgg < 1:146915/148‑1 (MQ=255) ttGGGTAAATCTCCATTCATTCAATGAAGGGAAAGTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCgg < 1:1700872/148‑1 (MQ=255) ggTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGttt < 2:880087/148‑1 (MQ=255) gTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTc < 2:200370/148‑1 (MQ=255) aTCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTcggcg > 2:1743679/1‑148 (MQ=255) aTCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGGGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTcggcg > 2:842514/1‑148 (MQ=255) cattcattCAATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAg > 1:3254348/1‑148 (MQ=255) tcattcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTtc > 2:2658983/1‑148 (MQ=255) tcattcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTtc > 2:787201/1‑148 (MQ=255) cattcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTtcc < 1:1257138/148‑1 (MQ=255) attcaATGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTtcct < 1:3117187/148‑1 (MQ=255) ttcaATGAAGGGAAATTGTTAT‑AAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTtcctcc > 2:3172073/1‑148 (MQ=255) aaTGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCcgc > 2:2979710/1‑148 (MQ=255) tGAAGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGa > 1:1874782/1‑148 (MQ=255) aaGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGAcc > 1:2251728/1‑148 (MQ=255) aGGGAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGATTGCGGCGACTTCTGCGTGGGCTGCACCTGTACTGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCa > 1:166234/1‑148 (MQ=255) ggAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGc > 2:1488182/1‑148 (MQ=255) gAAATTGTTATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCg > 2:1138006/1‑148 (MQ=255) tATGAAAACAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCAcc < 1:2969606/148‑1 (MQ=255) gAAAACATTTATGTATGGCATTTTTGCCATATCTGCGCTAGCTGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACTTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTAAGCACCGTa > 1:3399158/1‑148 (MQ=255) aaaacaGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTaa > 2:1089004/1‑148 (MQ=255) aaacaGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAg < 2:1216098/148‑1 (MQ=255) aaaaaGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAg < 2:2231934/148‑1 (MQ=255) aaGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTc > 2:661556/1‑148 (MQ=255) aaGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTc > 2:2495532/1‑148 (MQ=255) | TTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTATGAAAAAAGTTCTGTATGGCATTTTTGCCATATCTGCGCTTGCGGCGACTTCTGCGTGGGCTGCACCTGTACAGGTGGGCGAAGCGGCAGGGTCGGCAGCAACGTCGGTTTCGGCGGGGAGTTCCTCCGCGACCAGCGTCAGCACCGTAAGCTC > CP009273/4225696‑4225988 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |