Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | CP009273 | 4,337,927 | A→T | 7.3% | V212E (GTA→GAA) | dcuB ← | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009273 | 4,337,927 | 0 | A | T | 7.3% | 670.0 / 32.2 | 217 | V212E (GTA→GAA) | dcuB | C4‑dicarboxylate transporter, anaerobic; DcuS co‑sensor |
Reads supporting (aligned to +/- strand): ref base A (78/123); new base T (5/11); total (83/134) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.05e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 219 total aligned reads displayed.
GATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATCAAAG > CP009273/4337780‑4338073 | gATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTa < 2:2068162/148‑1 (MQ=255) gATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTa < 2:272810/148‑1 (MQ=255) tGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACg < 2:1794296/148‑1 (MQ=255) tGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACg > 1:829087/1‑148 (MQ=255) ggACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACgg < 1:267756/148‑1 (MQ=255) ggACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACgg < 1:1870423/148‑1 (MQ=255) cAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATg < 1:1000984/148‑1 (MQ=255) aGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGa < 1:3289465/148‑1 (MQ=255) aGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGa > 2:2386534/1‑148 (MQ=255) ggTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGaa < 2:2427953/148‑1 (MQ=255) ccGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAAttt < 1:1634621/148‑1 (MQ=255) ccGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAAttt < 2:3059748/148‑1 (MQ=255) cGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTc < 2:3425976/148‑1 (MQ=255) aTCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTgg < 2:2144824/148‑1 (MQ=255) aTCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTgg < 2:1583531/148‑1 (MQ=255) tCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGa > 1:1141586/1‑148 (MQ=255) cAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGaa > 2:384517/1‑148 (MQ=255) cACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTTCGGAGATGAATTTCTGGAActc < 2:1167776/148‑1 (MQ=255) cACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTTCGGAGATGAATTTCTGGAActc < 2:1168164/148‑1 (MQ=255) cAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTc > 1:235831/1‑148 (MQ=255) agaagGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGt > 2:2279153/1‑148 (MQ=255) aagGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTTCGGAGATGAATTTCTGGAACTCTTCGTCt < 2:3468396/148‑1 (MQ=255) aagGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCt > 2:846784/1‑148 (MQ=255) agGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCtt < 2:2533021/148‑1 (MQ=255) agGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCtt < 2:3496287/148‑1 (MQ=255) gCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTAt > 1:170794/1‑148 (MQ=255) cGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATc < 1:3205117/148‑1 (MQ=255) tACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGa < 1:2094868/148‑1 (MQ=255) tACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGa < 2:2692232/148‑1 (MQ=255) cAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATc < 2:671044/148‑1 (MQ=255) aGCGAGTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCt < 2:1976256/148‑1 (MQ=255) gCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCtt < 1:2345543/148‑1 (MQ=255) cGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCttt < 1:2524903/148‑1 (MQ=255) cGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCttt < 2:1650479/148‑1 (MQ=255) gATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTa < 2:2851653/148‑1 (MQ=255) ttGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTAcc > 1:525672/1‑148 (MQ=255) ccccGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACcgcg > 1:843244/1‑148 (MQ=255) ccccGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACcgcg > 1:1427004/1‑148 (MQ=255) cGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGaa < 2:2730702/148‑1 (MQ=255) gAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAAc < 2:2818167/148‑1 (MQ=255) gAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAAc < 2:1667955/148‑1 (MQ=255) ggAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTTCGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCa < 1:2243472/148‑1 (MQ=255) ggAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCa < 1:2837165/148‑1 (MQ=255) ggAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCa < 1:3011752/148‑1 (MQ=255) gAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAg > 2:1844229/1‑148 (MQ=255) aaaaTCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGc < 1:3118518/148‑1 (MQ=255) aaaTCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCt > 1:1550182/1‑148 (MQ=255) tCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGaa > 2:1762838/1‑148 (MQ=255) cacaTTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGa < 1:2573552/148‑1 (MQ=255) caTTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATa > 1:2810632/1‑148 (MQ=255) caTTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATa > 2:1066362/1‑148 (MQ=255) aTTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATAc < 2:1243871/148‑1 (MQ=255) gccagccaGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGa < 1:2077419/148‑1 (MQ=255) ccagccagTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGAt < 1:2384382/148‑1 (MQ=255) cagTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCa < 1:529973/148‑1 (MQ=255) gTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAgg < 1:750647/148‑1 (MQ=255) gTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAgg > 1:654817/1‑148 (MQ=255) gTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAgg > 1:147499/1‑148 (MQ=255) gTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAgg < 1:3446902/148‑1 (MQ=255) gCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATa < 2:2872071/148‑1 (MQ=255) ttttCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATAcc > 1:621295/1‑148 (MQ=255) tttCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCg > 2:2591854/1‑148 (MQ=255) tCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGAt < 1:563513/148‑1 (MQ=255) cGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGAtt > 2:3388410/1‑148 (MQ=255) ggCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTa < 1:2034048/148‑1 (MQ=255) aGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTTCGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACg < 2:3316454/148‑1 (MQ=255) aGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACg < 1:429041/148‑1 (MQ=255) gTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGt > 1:1934449/1‑148 (MQ=255) tttttATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCg > 1:1163015/1‑148 (MQ=255) ttttATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGa < 2:2637520/148‑1 (MQ=255) aTCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGa < 2:1085498/148‑1 (MQ=255) ccAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAAt > 1:1776248/1‑148 (MQ=255) cagcagCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATg < 2:928997/148‑1 (MQ=255) agcagcGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGTAATgg < 2:46765/148‑1 (MQ=255) gcagcGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTTCGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGt < 2:1390462/148‑1 (MQ=255) cagcGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTTCGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTg > 1:1827135/1‑148 (MQ=255) agcGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGa < 1:1589105/148‑1 (MQ=255) agcGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGa < 1:3336045/148‑1 (MQ=255) gcGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGAt > 2:186065/1‑148 (MQ=255) cGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGAtt > 1:1194408/1‑148 (MQ=255) ggTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCcagc < 1:2690777/148‑1 (MQ=255) tATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCcagcag < 1:2945835/148‑1 (MQ=255) aTCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGa > 1:810229/1‑148 (MQ=255) cACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATc > 2:2143657/1‑148 (MQ=255) cGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAg > 1:109791/1‑148 (MQ=255) tAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGa > 1:3331080/1‑148 (MQ=255) aaaCATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGaa < 1:84425/148‑1 (MQ=255) aaaCATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACAGATCTAAAGGATACAGATTAACGTCGATGTAATGGTGATTGCCAGAAGATATAGGaa > 2:241074/1‑148 (MQ=255) aCATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACt < 2:2663611/148‑1 (MQ=255) aCTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAg < 1:2282830/148‑1 (MQ=255) cTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGa < 2:235831/148‑1 (MQ=255) ttttCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGAc > 2:1490067/1‑148 (MQ=255) ccGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATc > 1:908309/1‑148 (MQ=255) ccGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATc > 1:1313235/1‑148 (MQ=255) ggTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATCaa < 2:1816906/148‑1 (MQ=255) gTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATCaaa > 2:3223431/1‑148 (MQ=255) gTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATCaaa > 1:2929362/1‑148 (MQ=255) gTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATCaaa < 1:186058/148‑1 (MQ=255) tACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATCAAAg < 1:3381156/148‑1 (MQ=255) tACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATCAAAg < 1:339635/148‑1 (MQ=255) | GATGGACGCAGGTCCGAATCAGCACCAAGAAGGGCGACTACAGCGATTGCCCCGAGGAAAATCCACATTGCCAGCCAGTTGCTTTTCGGCAGTTTTTTATCCAGCAGCGTCGCGGTATCACCGTAAACATACTCACGGTTTTCCGGTACGGAGATGAATTTCTGGAACTCTTCGTCTTTATCCAGATCTTTACCGCGGAACCAGCTGAAGATACCGATCGCCAGGATACCGATTAACGTCGATGGAATGGTGATTGCCAGCAGATCGAGGAACTCAAGATGGCGACCATCAAAG > CP009273/4337780‑4338073 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |