| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,434,260 | C→A | 94.1% | P111H (CCT→CAT) | tamB → | translocation and assembly module for autotransporter export, inner membrane subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,434,260 | 0 | C | A | 94.1% | 493.7 / 21.5 | 170 | P111H (CCT→CAT) | tamB | translocation and assembly module for autotransporter export, inner membrane subunit |
| Reads supporting (aligned to +/- strand): ref base C (4/6); new base A (76/84); total (80/90) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.51e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.82e-01 | |||||||||||
Only 100 of 182 total aligned reads displayed.
GTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTC > CP009273/4434115‑4434404 | ttcgttATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGcatcc < 1:2525662/148‑1 (MQ=255) ttcgttATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGcatcc < 1:677045/148‑1 (MQ=255) ttcgttATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGcatcc < 1:969109/148‑1 (MQ=255) ttcgttATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGcatcc < 2:1558299/148‑1 (MQ=255) tcgttATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGcatcct > 1:2483899/1‑148 (MQ=255) tcgttATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGcatcct > 2:2785884/1‑148 (MQ=255) cgttATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCtt < 2:735033/148‑1 (MQ=255) tGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGaa < 2:2279125/148‑1 (MQ=255) gAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGAATCCTTCTGAAc > 1:2989647/1‑148 (MQ=255) agcagcCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACa < 2:3170223/148‑1 (MQ=255) agcCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGt < 1:2759766/148‑1 (MQ=255) gCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTgaaga > 1:2486770/1‑148 (MQ=255) cGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGATTGAGTGCCTGTGGAACAGCATTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCATCATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTgaagaa < 2:3529409/148‑1 (MQ=255) gTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGaagaag < 2:1982649/148‑1 (MQ=255) gTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGaagaag < 1:2823495/148‑1 (MQ=255) gTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGaagaag < 2:1696049/148‑1 (MQ=255) gTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGaagaag < 1:1048482/148‑1 (MQ=255) tGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAagaaga < 1:3159629/148‑1 (MQ=255) gCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAgg > 1:174023/1‑148 (MQ=255) gTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAg < 2:1407299/148‑1 (MQ=255) tAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGa < 2:1494642/148‑1 (MQ=255) tAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGa < 2:1018092/148‑1 (MQ=255) tAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGa > 2:858722/1‑148 (MQ=255) aaaaGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGAt < 2:2804001/148‑1 (MQ=255) aaGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAg < 1:1848162/148‑1 (MQ=255) aGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGc > 2:653579/1‑148 (MQ=255) gCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCg < 2:2681628/148‑1 (MQ=255) gCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCg > 2:663934/1‑148 (MQ=255) ggCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTc > 2:3373981/1‑148 (MQ=255) aTCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCt > 1:782975/1‑148 (MQ=255) aTCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCt > 1:2564133/1‑148 (MQ=255) gCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGAt < 1:1421895/148‑1 (MQ=255) aTCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGAtct < 2:3475836/148‑1 (MQ=255) aTCTGGCTGTAGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAAGGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGAtct < 1:2517368/148‑1 (MQ=255) tCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGAtctc > 1:3067034/1‑148 (MQ=255) cTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGAtctct > 1:860844/1‑148 (MQ=255) tGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGAtctctc < 1:2414762/148‑1 (MQ=255) gCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCa < 1:1348303/148‑1 (MQ=255) gCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCa > 2:432162/1‑148 (MQ=255) tCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGcc > 1:344308/1‑148 (MQ=255) tCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGcc > 1:2161186/1‑148 (MQ=255) ggCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTa > 2:1123175/1‑148 (MQ=255) cTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATc < 1:2620852/148‑1 (MQ=255) ttGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATcc < 2:1093231/148‑1 (MQ=255) ttGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATcc > 1:757283/1‑148 (MQ=255) gAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCa > 2:1975301/1‑148 (MQ=255) tGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCa > 2:1707466/1‑148 (MQ=255) ccTGTGGAACAGCAGTGTTTGTATTAATGCTCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCAcc < 1:2197545/148‑1 (MQ=255) ccTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCAcc < 1:2228783/148‑1 (MQ=255) gAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGaca > 2:261213/1‑148 (MQ=255) gAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGaca > 1:438981/1‑148 (MQ=255) gAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGaca < 2:2962442/148‑1 (MQ=255) aaCAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGacac < 1:1816874/148‑1 (MQ=255) aCAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACg < 2:3067034/148‑1 (MQ=255) cagTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTg > 2:220501/1‑148 (MQ=255) gtgtTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGc > 2:2660889/1‑148 (MQ=255) tgtTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCa > 2:1498861/1‑148 (MQ=255) tGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTgg > 1:2276058/1‑148 (MQ=255) tGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTgg < 2:879744/148‑1 (MQ=255) aTTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGTTCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGTCACTTGACa < 2:814734/148‑1 (MQ=255) aTTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACa > 2:1337495/1‑148 (MQ=255) ttAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACaa < 1:1937664/148‑1 (MQ=255) tGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTc > 1:6405/1‑148 (MQ=255) aTCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCaa > 2:2064700/1‑148 (MQ=255) tCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAAc < 1:3540486/148‑1 (MQ=255) tCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAAc < 2:918652/148‑1 (MQ=255) tGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACAt > 1:1592217/1‑148 (MQ=255) gcgcTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTa < 2:1623926/148‑1 (MQ=255) cgcTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTaa < 2:3420238/148‑1 (MQ=255) tGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGAt > 1:970208/1‑148 (MQ=255) aaGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATtga < 1:2390453/148‑1 (MQ=255) aaGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATtga > 2:3323200/1‑148 (MQ=255) aGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACTACGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATtgat > 2:1000518/1‑148 (MQ=255) aGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATtgat > 1:2916885/1‑148 (MQ=255) aGACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATtgat > 1:1100995/1‑148 (MQ=255) gACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATtgatg < 1:2692784/148‑1 (MQ=255) gACATTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATtgatg > 1:3301861/1‑148 (MQ=255) aTTCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGTACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGaca > 2:2429440/1‑148 (MQ=255) ttCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGacac > 1:3481067/1‑148 (MQ=255) ttCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGacac > 1:1034899/1‑148 (MQ=255) tCAGGTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGAcacc < 1:3128765/148‑1 (MQ=255) ggTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACg < 2:1402872/148‑1 (MQ=255) ggTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACg < 2:1403307/148‑1 (MQ=255) ggTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACg < 1:1404726/148‑1 (MQ=255) gTCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACgg < 2:971835/148‑1 (MQ=255) tCAACATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGt < 1:321878/148‑1 (MQ=255) aaCATCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTAt < 2:2601826/148‑1 (MQ=255) aTCGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCgg < 1:3391693/148‑1 (MQ=255) cGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTg > 1:795874/1‑148 (MQ=255) cGACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTg > 2:1250081/1‑148 (MQ=255) cGACAGTAAAAAAATGCATCCTTCAGAACAGGTTGAAGAAGAGGAAGATATCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCAGACACGGGTGGCACTGGACAACGTCAACATTAACATAGATGACACCACGGTAACGCTg > 1:2501264/1‑148 (MQ=255) gACAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGa < 1:1686873/148‑1 (MQ=255) cAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATg < 1:2984287/148‑1 (MQ=255) cAGTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATg < 2:2365498/148‑1 (MQ=255) gTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGa > 1:2981374/1‑148 (MQ=255) gTAAAAAAATGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGa > 1:1176218/1‑148 (MQ=255) aaaaaaaTGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGACt < 1:2460037/148‑1 (MQ=255) aaaaTGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCa > 1:348745/1‑148 (MQ=255) aaaTGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCAc > 1:2082832/1‑148 (MQ=255) tGCATCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTc > 1:2595623/1‑148 (MQ=255) | GTTCGTTATGAGCAGCCAGGCGTGGCGGTAAAAGCGGGCAATCTGCATCTGGCTGTCGGGCTTGAGTGCCTGTGGAACAGCAGTGTTTGTATTAATGATCTGGCGCTGAAAGACATTCAGGTCAACATCGACAGTAAAAAAATGCCTCCTTCTGAACAGGTTGAAGAAGAGGAAGATAGCGGTCCGCTGGATCTCTCCACGCCGTATCCCATCACCCTGACACGGGTGGCACTGGACAACGTCAACATTAAGATTGATGACACCACGGTATCGGTGATGGACTTCACCTC > CP009273/4434115‑4434404 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |