| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,552,679 | G→T | 6.8% | R248R (CGA→AGA) | yjiK ← | SdiA‑regulated family putative membrane‑anchored protein; putative phytase‑like esterase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,552,679 | 0 | G | T | 6.8% | 926.0 / 25.2 | 249 | R248R (CGA→AGA) | yjiK | SdiA‑regulated family putative membrane‑anchored protein; putative phytase‑like esterase |
| Reads supporting (aligned to +/- strand): ref base G (126/106); new base T (14/3); total (140/109) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.99e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.31e-01 | |||||||||||
Only 100 of 256 total aligned reads displayed.
TAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTAAATTGCCG > CP009273/4552532‑4552826 | taaCAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCg < 1:650068/148‑1 (MQ=255) aCAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGAc > 1:1265171/1‑148 (MQ=255) aCAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGAc > 2:805688/1‑148 (MQ=255) aaaaaGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTg < 1:1915568/148‑1 (MQ=255) aaaaaGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTg > 1:1567400/1‑148 (MQ=255) aaaaGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGc > 2:1552973/1‑148 (MQ=255) aaaGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGcc > 1:1607778/1‑148 (MQ=255) aaGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCt > 2:461184/1‑148 (MQ=255) aGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCtt < 1:2929118/148‑1 (MQ=255) ggTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCttt < 2:3415197/148‑1 (MQ=255) ggTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCttt > 2:367264/1‑148 (MQ=255) gTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTg > 2:3044920/1‑148 (MQ=255) gTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTg > 2:1102613/1‑148 (MQ=255) tGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTgg < 1:805688/148‑1 (MQ=255) aGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTa < 1:1376950/148‑1 (MQ=255) gCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAg > 2:2754378/1‑148 (MQ=255) gCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAg > 2:1950528/1‑148 (MQ=255) cATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGt > 1:1642710/1‑148 (MQ=255) cATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGt > 1:911868/1‑148 (MQ=255) cATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGt > 2:876835/1‑148 (MQ=255) tGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGa < 1:101733/148‑1 (MQ=255) tGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGa < 1:2912623/148‑1 (MQ=255) gCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGAc > 2:1040393/1‑148 (MQ=255) gCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGAc < 2:1307553/148‑1 (MQ=255) aGCCTGTTAATTCGATGATTGAGGGGTAAAGCGTTAAAAACGTTTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTTTGCGACAAACCTCGACTGCCTTTGGTTAGTGACAtt < 2:1033847/148‑1 (MQ=255) gCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACAttt < 1:1718755/148‑1 (MQ=255) ccTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTc < 1:2722937/148‑1 (MQ=255) cTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCa < 1:1134440/148‑1 (MQ=255) cTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCa < 1:2903786/148‑1 (MQ=255) gTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCAcc > 1:54127/1‑148 (MQ=255) tttaTGCGATGATTGTGGGGTAAAGCGATTAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGTGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGACTTTGGTTTGTGAGATTTCACCg < 2:1736167/145‑1 (MQ=255) tAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGa > 2:1379769/1‑148 (MQ=255) tAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGa > 1:214073/1‑148 (MQ=255) tAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGa > 1:2017338/1‑148 (MQ=255) gCGATGATAGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAAc > 2:1460458/1‑148 (MQ=255) cGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAAcc < 1:1318939/148‑1 (MQ=255) atTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCTACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGcc > 1:130628/1‑148 (MQ=255) atTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCTACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGcc > 1:132779/1‑148 (MQ=255) atTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCTACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGcc > 1:1928667/1‑148 (MQ=255) tGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCaa > 1:708211/1‑148 (MQ=255) tGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCaa > 1:1991980/1‑148 (MQ=255) aGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCGTTGGTTAGTGACATTTCACCGATAACCTCGCCAAcc > 2:3086976/1‑148 (MQ=255) gggTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAg < 2:2802838/148‑1 (MQ=255) aaGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTa < 2:1988497/148‑1 (MQ=255) gATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCTACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTc < 2:1767064/148‑1 (MQ=255) tAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCt > 1:149507/1‑148 (MQ=255) aaaCGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGa < 1:2297720/148‑1 (MQ=255) aaCGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAg < 1:3441994/148‑1 (MQ=255) aaCGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAg < 2:2687972/148‑1 (MQ=255) aaCGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAg < 2:1826568/148‑1 (MQ=255) cGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTg > 1:2564974/1‑148 (MQ=255) cGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTg > 1:2565234/1‑148 (MQ=255) tttGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTgcgc > 1:3538138/1‑148 (MQ=255) ttGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGcgcg < 2:1643699/148‑1 (MQ=255) ttGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGcgcg > 2:707635/1‑148 (MQ=255) ggTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCgag < 2:2071658/148‑1 (MQ=255) gTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCgaga > 1:3125178/1‑148 (MQ=255) ttCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGAt > 1:331464/1‑148 (MQ=255) ttCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGAt > 1:2057693/1‑148 (MQ=255) tCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCTACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGAtt > 2:728461/1‑148 (MQ=255) cGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTc < 1:367264/148‑1 (MQ=255) aaCGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATga > 2:2930811/1‑148 (MQ=255) aCGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCTACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATgag > 2:2246739/1‑148 (MQ=255) ccAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCg > 2:3325830/1‑148 (MQ=255) cAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGt < 1:3034229/148‑1 (MQ=255) gCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTAtttt > 2:1887060/1‑148 (MQ=255) gCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTAtttt < 2:2403905/148‑1 (MQ=255) catccatcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTAttttt > 2:298417/1‑148 (MQ=255) atccatcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTAtttttt > 2:2941510/1‑148 (MQ=255) tccatcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTAttttttt < 2:3238732/148‑1 (MQ=255) tccatcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTAttttttt > 2:3390890/1‑148 (MQ=255) tccatcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTAttttttt > 2:2627112/1‑148 (MQ=255) catcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGc < 1:243664/148‑1 (MQ=255) atcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCt > 1:898014/1‑148 (MQ=255) tcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTg < 2:381065/148‑1 (MQ=255) tcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTg < 2:3449421/148‑1 (MQ=255) tcGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTg > 1:3484845/1‑148 (MQ=255) cGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTgg < 1:1432714/148‑1 (MQ=255) ccccTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTaaa > 2:1814669/1‑148 (MQ=255) ccTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAAtt > 1:420148/1‑148 (MQ=255) cTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGGCTTTGGTTATTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTc < 1:1771305/148‑1 (MQ=255) cGGCCTGTTTGATGTTATGCAACAAACCTCTACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGAGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTga > 2:1944409/1‑147 (MQ=255) ccTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGcc > 1:75164/1‑148 (MQ=255) ccTGTATGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGAGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGAGcc > 1:1356995/1‑148 (MQ=255) tGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCgg < 2:818794/148‑1 (MQ=255) gTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGa < 1:86985/148‑1 (MQ=255) aTGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACAcat > 1:491669/1‑148 (MQ=255) tGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACAcatc < 2:1567400/148‑1 (MQ=255) gTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACAcatca < 2:745151/148‑1 (MQ=255) gTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGAGCCGGACAcatca > 2:2279682/1‑148 (MQ=255) tATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACatcatc > 1:1548776/1‑148 (MQ=255) gCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTaa > 2:3155395/1‑148 (MQ=255) cAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTa > 2:61357/1‑148 (MQ=255) aaaCCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTaa < 1:2754378/148‑1 (MQ=255) aaaCCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTaa < 2:1265171/148‑1 (MQ=255) aaaCCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTaa < 2:1585790/148‑1 (MQ=255) aaaCCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGAGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTaa < 1:2246739/148‑1 (MQ=255) cTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTAAATTg < 1:2388841/148‑1 (MQ=255) tCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTAAATTGc > 1:2991217/1‑148 (MQ=255) tCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTAAATTGc < 1:1115691/148‑1 (MQ=255) | TAACAAAAAGGTGAAGCATGCCAGCCTGTTAATGCGATGATTGAGGGGTAAAGCGATAAAAACGATTTGGTTCGCTAACGATATAAATATTACCAGAGGCATCCATCGCAACCCCTTCGGCCTGTTTGATGTTATGCGACAAACCTCGACTGCCTTTGGTTAGTGACATTTCACCGATAACCTCGCCAACCAGGGTTACTTCCTGGAGTGCGCGAGATTCATGAGACAGCACCAGAAGCGTATTTTTTTGCTGGTTAAATTCTGCGCCGGACACATCATCTAAAGTAAATTGCCG > CP009273/4552532‑4552826 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |