| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,565,742 | C→A | 6.8% | pseudogene (2007/2937 nt) | yjiV → | pseudogene; conserved hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,565,742 | 0 | C | A | 6.8% | 606.3 / 15.3 | 161 | pseudogene (2007/2937 nt) | yjiV | pseudogene; conserved hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (68/82); new base A (5/6); total (73/88) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
AGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGA > CP009273/4565595‑4565888 | aGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtc > 2:1372177/1‑148 (MQ=255) tCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtcgt > 1:3292758/1‑148 (MQ=255) tCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtcgt > 1:99159/1‑148 (MQ=255) tCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGAtcgtgtcgt > 2:1193001/1‑148 (MQ=255) acaATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTgg > 1:62639/1‑148 (MQ=255) caATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGa > 1:3428311/1‑148 (MQ=255) aTGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAg < 2:190513/148‑1 (MQ=255) cGGAAAGCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAggcgg < 2:3281879/148‑1 (MQ=255) ggAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAggcggc > 1:663120/1‑148 (MQ=255) taaaTCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCt < 1:1041620/147‑1 (MQ=255) gAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGCGGGTCTGGCAAACGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCt < 1:1041633/148‑1 (MQ=255) aaaTCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCtt > 1:2335198/1‑148 (MQ=255) aaTCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTc < 2:1579723/148‑1 (MQ=255) tCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTcta < 2:1759954/148‑1 (MQ=255) tCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTcta > 1:3537221/1‑148 (MQ=255) cTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTctac > 1:2971100/1‑148 (MQ=255) aGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCg < 2:3424314/148‑1 (MQ=255) cTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTa < 2:1913349/148‑1 (MQ=255) cTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTa < 2:1911476/148‑1 (MQ=255) cTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTa > 1:1509754/1‑148 (MQ=255) cacaGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCa < 2:375093/148‑1 (MQ=255) acaGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCAc > 1:2411856/1‑148 (MQ=255) aGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCActc < 2:750653/148‑1 (MQ=255) gAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTg > 1:1266359/1‑148 (MQ=255) aGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGcc < 1:563699/148‑1 (MQ=255) gACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGccc < 2:1168963/148‑1 (MQ=255) gACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGccc < 2:1274224/148‑1 (MQ=255) aCTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCca > 1:1202454/1‑148 (MQ=255) cGCAGAGGGTCTGGCAAATGCCCGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTATACTATCGTACTGCCGAGCACTCTGCCcagcag < 1:958993/148‑1 (MQ=255) gagGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCCGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAgtcgt < 2:2039014/148‑1 (MQ=255) gggTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCa > 1:3180763/1‑148 (MQ=255) ggTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAg > 2:629362/1‑148 (MQ=255) ggTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAg > 1:641664/1‑148 (MQ=255) gTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGa < 2:3269577/148‑1 (MQ=255) tCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGaa < 2:48571/148‑1 (MQ=255) tCTGGAAAACGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGaa < 1:2723819/148‑1 (MQ=255) ggCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGt < 1:497039/148‑1 (MQ=255) ggCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGt < 2:672715/148‑1 (MQ=255) cAAAAGCCCGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCt < 1:2261225/148‑1 (MQ=255) cAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCt < 1:2261193/148‑1 (MQ=255) aaaGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGc > 1:1066930/1‑148 (MQ=255) cgcccgcgACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCaa < 1:1819589/144‑1 (MQ=255) ccgcgACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGc < 1:1809805/147‑1 (MQ=255) cgACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTAt < 1:308700/148‑1 (MQ=255) cgACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTAt < 1:305366/148‑1 (MQ=255) gggTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGaaaa > 2:3174203/1‑148 (MQ=255) ggTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAg < 1:383336/148‑1 (MQ=255) ggTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAg < 1:1451136/148‑1 (MQ=255) tCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGAt > 2:2561567/1‑148 (MQ=255) cAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATg > 1:3447881/1‑148 (MQ=255) cAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATg > 1:153121/1‑148 (MQ=255) cATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCa < 2:2544990/148‑1 (MQ=255) gATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGa > 2:1493397/1‑148 (MQ=255) aTCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGaa > 1:2530018/1‑148 (MQ=255) ccGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATg < 2:2703997/148‑1 (MQ=255) ccGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATg < 2:1266359/148‑1 (MQ=255) gATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCaa < 1:39670/148‑1 (MQ=255) tCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACt > 2:885398/1‑148 (MQ=255) gCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTaa < 1:2652605/148‑1 (MQ=255) gCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTaa < 2:663120/148‑1 (MQ=255) cacaATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTaaa > 1:2061616/1‑148 (MQ=255) cacaATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTaaa < 1:31227/148‑1 (MQ=255) caATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATg > 1:197769/1‑148 (MQ=255) caATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATg < 1:2686657/148‑1 (MQ=255) caATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATg < 2:2334452/148‑1 (MQ=255) aTTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGtt > 1:2882951/1‑148 (MQ=255) aTTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGtt < 2:3180763/148‑1 (MQ=255) ttGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTtc > 1:1308145/1‑148 (MQ=255) tGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCACAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTtct > 2:81450/1‑148 (MQ=255) ggTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCaa < 2:2133575/148‑1 (MQ=255) tCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACt < 2:2458002/148‑1 (MQ=255) tCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACt < 2:2458264/148‑1 (MQ=255) cggttaaCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGAGGCTTCTACTTTATTACTGCCGAGCACTCTGCCCAGGAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTATCAACTg < 2:2424279/143‑1 (MQ=255) cGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTg < 2:2143137/148‑1 (MQ=255) aaaCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTcc > 2:201924/1‑148 (MQ=255) aaaCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTcc > 2:198878/1‑148 (MQ=255) aaaCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTcc > 1:1165768/1‑148 (MQ=255) aCGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccac < 1:816398/148‑1 (MQ=255) aCGTCTGGACAGACATTAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccac > 1:439053/1‑148 (MQ=255) cGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccacc > 2:96254/1‑148 (MQ=255) cGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccacc > 2:1521266/1‑148 (MQ=255) tCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccaccac > 2:2815078/1‑148 (MQ=255) tCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccaccac > 1:3010198/1‑148 (MQ=255) cTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTccaccacc < 1:1169162/148‑1 (MQ=255) ggACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCAt < 1:834992/148‑1 (MQ=255) ggACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCAt > 1:2762180/1‑148 (MQ=255) cagacaTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGa > 1:732802/1‑148 (MQ=255) acaTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAAt < 1:499732/148‑1 (MQ=255) acaTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAAt < 1:2285922/148‑1 (MQ=255) aTTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATgg < 1:894410/148‑1 (MQ=255) ttAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAACTggg > 2:2292354/1‑148 (MQ=255) ttAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATggg > 1:1130390/1‑148 (MQ=255) ttAACGATCGTGTAGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATggg < 2:3537221/148‑1 (MQ=255) tAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATgggg > 2:3433839/1‑148 (MQ=255) aaCGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATggggg > 1:2457892/1‑148 (MQ=255) aaCGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATggggg > 1:887237/1‑148 (MQ=255) tcgtgtcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGAt > 1:450908/1‑148 (MQ=255) cgtgtcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCACAGCTATGAAAAGATGTTCAAGAATGGGCAACTAACTGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATa < 2:2606624/148‑1 (MQ=255) tcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGa > 1:2158220/1‑148 (MQ=255) tcgtgGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGa > 2:225723/1‑148 (MQ=255) | AGTCACAATGCCGGAAATCTGGAAGCTGGATCGTTCACAGGAAGACTACGCAGAGGGTCTGGCAAAAGCACGCGACTGGGTCAGCCATGATCCGCTGATCGCACAATTGCGGTCGGAAAACGTCTGGACAGACATTAACGATCGTGTCGTGGAAGGCGGCTTCTACTATCGTACTGCCGAGCACTCTGCCCAGCAGTCGTCAGAACGTCTGCAAAGCTATGAAAAGATGTTCAAGAATGGGCAACTAAATGTTCTCAACTGTTCCACCACCATGGAAATGGGGGTTGATACCGA > CP009273/4565595‑4565888 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |