| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 4,603,125 | A→C | 10.0% | T300P (ACG→CCG) | yjjU → | putative patatin‑like family phospholipase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 4,603,125 | 0 | A | C | 10.0% | 366.2 / 4.8 | 173 | T300P (ACG→CCG) | yjjU | putative patatin‑like family phospholipase |
| Reads supporting (aligned to +/- strand): ref base A (61/89); new base C (19/4); total (80/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.06e-04 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 177 total aligned reads displayed.
CAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACC > CP009273/4602978‑4603272 | cAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCa < 1:3049543/148‑1 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑gg > 2:2051680/1‑148 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑gg < 1:3459561/148‑1 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑gg < 1:359864/148‑1 (MQ=255) tttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑gg < 1:2150375/148‑1 (MQ=255) ttATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGt < 2:2590471/148‑1 (MQ=255) tATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑GGtt > 2:3447166/1‑148 (MQ=255) ttGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTgg < 2:427521/148‑1 (MQ=255) tGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑GGTTggg > 1:2180087/1‑147 (MQ=255) tGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATAACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTAGTTCCTCGCCAC‑GGTTGGc > 2:1446407/1‑148 (MQ=255) gagaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCa < 2:355280/148‑1 (MQ=255) gaAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑GGTTTGCAAg > 2:2158162/1‑148 (MQ=255) aaaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGc > 2:1189655/1‑148 (MQ=255) aaaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTGCTCGCCAC‑GGGTGGCCAGc > 1:2247104/1‑148 (MQ=255) aaCCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCt < 2:662069/148‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTa < 1:1302231/148‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTa < 1:1506757/148‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTa < 1:1506827/148‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTa < 2:3407741/148‑1 (MQ=255) accaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTTCTAGCCCC‑CGTTGGCAACCTa > 1:981695/1‑148 (MQ=255) ccaccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCCCCCCGGGTTGGCacctat > 2:451764/1‑143 (MQ=255) caccGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTAtt < 2:2220859/148‑1 (MQ=255) accGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTa < 1:2974569/148‑1 (MQ=255) ggCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTGCTCGCCAC‑CGTTGGCCCGCTATTAAcgg > 1:1905408/1‑146 (MQ=255) cAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCCCGCCCC‑GGGTGGGACGCGATTAACTGaa > 2:2389264/1‑148 (MQ=255) aGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGTTTTTCACGCCCC‑GGGTGGGAAACTATTAAATGaaaa > 1:3346671/1‑148 (MQ=255) gCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGaaaaa < 2:2464818/148‑1 (MQ=255) gCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGaaaaa < 2:1108857/148‑1 (MQ=255) gCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGaaaaa < 2:1109040/148‑1 (MQ=255) cTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAg < 2:2088586/148‑1 (MQ=255) gCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAgcg < 2:3460934/148‑1 (MQ=255) gCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAgcg < 1:2605333/148‑1 (MQ=255) gCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACTCGCCAC‑CGTTGGCAAGCTATTAAATGaaaaatag > 1:3153682/1‑145 (MQ=255) cGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAgcgc < 2:3528059/148‑1 (MQ=255) gATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCCC‑GGGTGGCAAGCTATTAACTGAAAAAGcgccg > 2:787903/1‑148 (MQ=255) gATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCACGCTATTAACTGAAAAAGcgccg > 2:2568514/1‑148 (MQ=255) atatTCGAAATTTTTCCGCCGAAGCCATTACATAGTATGGCGCTTGGATGTCTGTTTGCGGCGCTGCTTGAATACTATAAACTTGGGCTTTTATGCGGTCGTTATTTCCTCGCCAC‑GTTTGGCAAGATATTAACTGAAAAAGcgccgc < 2:389185/148‑1 (MQ=255) tatTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCt > 2:393335/1‑148 (MQ=255) atTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCTCGCCAC‑GGGTGGCAAGCTATTAACTTAAAAATCGCCGCtt > 1:2623240/1‑148 (MQ=255) atTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTACACGCCAC‑GGTTGGCAAGCGATTAACTGAAAAATcgccgcgt > 1:568128/1‑146 (MQ=255) ttCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTCGCCAC‑GGTTGGCAAGCTATTAAATGAAAAAACGCCGCGTa > 2:1240182/1‑148 (MQ=255) tCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTAc > 2:1718390/1‑148 (MQ=255) tCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑GGTTGGCAAGCGATTAAATGAAAAATCGCCGCTTAc > 1:2085212/1‑148 (MQ=255) tCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCCCCAC‑CGGTGGCAAGCAATTAAAAGAAAAAACGCCGCGTaa > 1:849866/1‑147 (MQ=255) tCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCGTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTAc < 2:1136285/148‑1 (MQ=255) tCGAAATTTACCCGCCTAAGCCATTACATAGTAGCGCGGTGGGAAGTCGGATTCCGGCGCTGCGTGAAGACTATAAAGTTGGGCTTTTATGCGGTCGTTTTTTCCTCGCCAG‑GGTTGGAAAGATATTAACTCAAAAAGCGCCGCTTAc < 1:3038533/148‑1 (MQ=255) aaaTTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGATTTCCGCGCCCC‑GGGTGGGAAGCGATTAACTGAAAAAGCGCCGCGTAcccc > 1:2590003/1‑147 (MQ=255) ttATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTTCTCGCCCC‑CGGTGGGGAGCCAATAACAGAAAAATCGCCGCGTAccccccca > 1:1242445/1‑146 (MQ=255) ttATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTGGTTTGCAGGCCCC‑GGGTGGGCACCTATTAAAGGGAAAATCCCCGCGTTACCGcccc > 1:1242482/1‑146 (MQ=255) tCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTg > 2:2905879/1‑148 (MQ=255) ccgccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCggg > 2:1399768/1‑148 (MQ=255) gccgACGCCATAACATCGTAGCGCGCTGGGCAGTCGGAGGCCGGCGCGGCGTGAAGACTATAAACTTGGGGGTTTATGCGGTCGTTTTTTCCGCCCCCG‑GGTGGCCAAGCTATTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTg < 1:2104022/148‑1 (MQ=255) ccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGc < 2:3260426/148‑1 (MQ=255) ccgAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTGGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGc < 2:3260443/148‑1 (MQ=255) cgAAGCCACTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGcc < 2:246402/148‑1 (MQ=255) gAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTGGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCa < 1:2303556/148‑1 (MQ=255) aaGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTTTTTTCTCGCCCC‑CGGTGGGCCGCGATTTAAAGAAAAAACGCCCCCTAACCCCCCTCTgggggccg > 1:3305290/1‑142 (MQ=255) aaGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCCTCAGGTGCCAg > 2:1036552/1‑148 (MQ=255) ccATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCTTTTATGCGGTGGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtgg < 2:1209977/148‑1 (MQ=255) ccATAACATAGTATCGCGCTGGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCTTTTATGCGGTGGTTATTTCCTCGCCAC‑GGTTGGAAAGCTATTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtgg < 1:2722447/148‑1 (MQ=255) aTTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAgtggtg < 2:1499187/148‑1 (MQ=255) cATCGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGc < 2:2279298/148‑1 (MQ=255) cATAGTATCGCGCTGGGCAGGCGGATTCCGGCGCTGCGTGAAGAATATAACCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCCC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGc < 1:1103133/148‑1 (MQ=255) aTAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTCGCCAC‑CGTTGGCCAGCTATTAACTGAAAAAGCGCCGCATACCCCCCAACTGGTGCCCGGGGTGACGcc > 2:1489028/1‑148 (MQ=255) aGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCACGCCCC‑GGTTTGCAAGCTATTAAATGAAAAAGCGCCGCGTTACCGCCCTCTGGGGCCACTGGTGTAGCCgg > 2:336901/1‑148 (MQ=255) aTCGCGCTTGGCTGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGGTTTTTTGGGGTGGTTTTTTCCTCGCCAC‑GGTTGGCAAGCTATTAAATGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAAt < 1:451764/148‑1 (MQ=255) tCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATc < 1:1670408/148‑1 (MQ=255) cgcgCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTACTCGCCAC‑GGTTTGCAAGCGATTTACTGAAAAAGCGCCGCTTACCCCCCATCTGGTGCCAGTGGTGACGCCGGAATCg > 2:1998492/1‑148 (MQ=255) tGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTc < 2:2153013/148‑1 (MQ=255) gCAGTCGGATTCCGGCGCTGCGTGAAGACTATAACCTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCAt < 1:2945679/148‑1 (MQ=255) gCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCAt < 2:1305780/148‑1 (MQ=255) atgTCGGCTTCCGGCGAGGCGTGAAGAATATAAACTTGGGCTTTTTTGGTGTAGTTATTGACTCGCCAC‑GGTTGCCACGATATAAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCAtt < 1:3281011/146‑1 (MQ=255) gTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTcc < 1:588092/148‑1 (MQ=255) tCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGGCAGTGGTGACGCCGGAAACGATTGTCATTccc > 2:2855210/1‑147 (MQ=255) cGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGc < 2:1725662/148‑1 (MQ=255) gATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTCGCCAC‑GGTTGGCCAGGGATTAACTGAAAAAGCGCCGCGTACCCGCCCTCTGGTGGCAGGGGTGACGCCCGAATCGATTGTCATTCCGCCt > 2:3030000/1‑148 (MQ=255) gATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCt < 1:831011/148‑1 (MQ=255) ccGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCCC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTgcgc < 1:3064822/148‑1 (MQ=255) cTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCg < 1:1162627/148‑1 (MQ=255) cGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGACAAAGCGCCGCGTACCCGCCATCGGGTGCCAGTGGTGACGCCGGAATCGATTGTCCTTCCGCCAGCGCCAGTCGCCa > 2:2953944/1‑148 (MQ=255) tGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTGCTCGCCAC‑GGTTGGCAAGCTATTAACAGAAAAAGCGCCGCTTACCCGCCCTCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCCTTCCGCCTGCGCCAGTCGCCaaa > 2:1950250/1‑147 (MQ=255) tGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACAGAAAAAGCGCCGCTTACCCCCCCTCTGGTGCCCGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGGCGCCAAc > 2:2245378/1‑148 (MQ=255) taaGACTATAAACTTGGGCTTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACg < 1:976637/147‑1 (MQ=255) aGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGAt < 1:2905879/148‑1 (MQ=255) cTATAAAGTGGGGGGTTTATGGGGTGTTTATTTCCTCGCCAC‑GGTTGCCAAGCTATTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACg < 1:11137/148‑1 (MQ=255) cTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCCGTCGCCAACGATACGCTGGTTg > 2:2288311/1‑148 (MQ=255) gTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGt < 2:1927286/148‑1 (MQ=255) tATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAg < 2:407882/148‑1 (MQ=255) aTGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGc < 2:3153682/148‑1 (MQ=255) gCGGTCGTTATGTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGa < 2:981695/148‑1 (MQ=255) ttATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCg > 1:1532512/1‑148 (MQ=255) tATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc < 2:1096877/148‑1 (MQ=255) tATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGc > 1:444332/1‑148 (MQ=255) tttCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAg > 2:487126/1‑148 (MQ=255) tttCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAg > 2:487177/1‑148 (MQ=255) ttCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAgg > 1:1284160/1‑148 (MQ=255) ttCCGCGCCAC‑GGTTGGCAAGCTATTAACTCAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAgg < 1:2820408/148‑1 (MQ=255) cTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGa < 1:2337014/148‑1 (MQ=255) tCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGaa > 1:1844736/1‑148 (MQ=255) aC‑GGTTGGCAAGCTATTAACTTAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCGGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGATGTGAGCGACGCTCCGCAGGCGAACGAcc < 2:2752622/148‑1 (MQ=255) | CAATTTATTGAGAAACCACCGGGCAAGCTGCGGATATTCGAAATTTATCCGCCGAAGCCATTACATAGTATCGCGCTTGGCAGTCGGATTCCGGCGCTGCGTGAAGACTATAAACTTGGGCGTTTATGCGGTCGTTATTTCCTCGCCAC‑GGTTGGCAAGCTATTAACTGAAAAAGCGCCGCTTACCCGCCATCTGGTGCCAGTGGTGACGCCGGAATCGATTGTCATTCCGCCTGCGCCAGTCGCCAACGATACGCTGGTTGCCGAAGTGAGCGACGCTCCGCAGGCGAACGACC > CP009273/4602978‑4603272 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |