Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 672,142 T→A 100% intergenic (‑139/‑25) ybeQ ← / → ybeR Sel1 family TPR‑like repeat protein/uncharacterized protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009273672,1420TA98.8% 829.1 / ‑0.5 251intergenic (‑139/‑25)ybeQ/ybeRSel1 family TPR‑like repeat protein/uncharacterized protein
Reads supporting (aligned to +/- strand):  ref base T (2/1);  new base A (134/114);  total (136/115)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01
Rejected as polymorphism: E-value score below prediction cutoff.
Rejected as polymorphism: Frequency below/above cutoff threshold.
Rejected as polymorphism: Variant not supported by required number of reads on each strand.

Only 100 of 252 total aligned reads displayed.

AAATCATTATCATTTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCTTTTTTGAC  >  CP009273/671997‑672286
                                                                                                                                                 |                                                                                                                                                
aaaTCATTATCATTTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTaaa                                                                                                                                                <  2:2543005/148‑1 (MQ=255)
 aaTCATTATCATTTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAAt                                                                                                                                               >  1:462553/1‑148 (MQ=255)
 aaTCATTATCATTTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAAt                                                                                                                                               <  2:3046498/148‑1 (MQ=255)
   tcattatcattTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGa                                                                                                                                             <  1:1040959/148‑1 (MQ=255)
      ttatcattTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAata                                                                                                                                          <  2:2069910/148‑1 (MQ=255)
        atcattTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATAtt                                                                                                                                        >  1:3465514/1‑148 (MQ=255)
        atcattTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATAtt                                                                                                                                        <  2:3101279/148‑1 (MQ=255)
          cattTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTa                                                                                                                                      >  1:2150507/1‑148 (MQ=255)
            tttCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAg                                                                                                                                    <  1:1827570/148‑1 (MQ=255)
            tttCCTTATGGTTGAAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAg                                                                                                                                    <  1:1827619/148‑1 (MQ=255)
             ttCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAgg                                                                                                                                   >  1:889324/1‑148 (MQ=255)
                  tATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATaaa                                                                                                                              >  2:924952/1‑148 (MQ=255)
                  tATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATaaa                                                                                                                              >  2:685222/1‑148 (MQ=255)
                       ttGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATtata                                                                                                                         <  1:3528321/148‑1 (MQ=255)
                       ttGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATtata                                                                                                                         <  1:2645584/148‑1 (MQ=255)
                       ttGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATtata                                                                                                                         <  1:2335270/148‑1 (MQ=255)
                            gATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGAc                                                                                                                    >  2:3507606/1‑148 (MQ=255)
                            gATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGAc                                                                                                                    >  2:1562125/1‑148 (MQ=255)
                               aaaaCATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATg                                                                                                                 <  1:1261903/148‑1 (MQ=255)
                                aaaCATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATgg                                                                                                                >  2:2528428/1‑148 (MQ=255)
                                 aaCATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGa                                                                                                               <  1:1701092/148‑1 (MQ=255)
                                 aaCATATTATATTTTAATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATAATATGGACATgta                                                                                                               >  1:2088263/1‑146 (MQ=255)
                                  aCATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAg                                                                                                              >  2:3126842/1‑148 (MQ=255)
                                      attatattTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGc                                                                                                          >  2:2450144/1‑148 (MQ=255)
                                        tatattTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCaa                                                                                                        >  1:1013847/1‑148 (MQ=255)
                                         atattTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCaaa                                                                                                       <  2:1692443/148‑1 (MQ=255)
                                          tattTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCaaaa                                                                                                      <  1:1303712/148‑1 (MQ=255)
                                           attTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCaaaaa                                                                                                     <  1:752400/148‑1 (MQ=255)
                                           attTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCaaaaa                                                                                                     >  2:2925102/1‑148 (MQ=255)
                                           attTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCaaaaa                                                                                                     <  2:2270020/148‑1 (MQ=255)
                                             ttttATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAat                                                                                                   >  1:2210002/1‑148 (MQ=255)
                                               ttATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAatat                                                                                                 <  2:1813886/148‑1 (MQ=255)
                                                  tgtgTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGt                                                                                              >  2:342974/1‑148 (MQ=255)
                                                   gtgtTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGtt                                                                                             <  2:45637/148‑1 (MQ=255)
                                                    tgtTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGttt                                                                                            >  2:1980612/1‑148 (MQ=255)
                                                    tgtTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGttt                                                                                            <  2:3430624/148‑1 (MQ=255)
                                                    tgtTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGttt                                                                                            <  2:2670258/148‑1 (MQ=255)
                                                    tgtTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGttt                                                                                            >  2:589614/1‑148 (MQ=255)
                                                     gtTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTg                                                                                           >  2:1316126/1‑148 (MQ=255)
                                                     gtTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTg                                                                                           >  2:362375/1‑148 (MQ=255)
                                                      ttCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGc                                                                                          <  2:2115712/148‑1 (MQ=255)
                                                       tCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCa                                                                                         >  2:659527/1‑148 (MQ=255)
                                                        ccATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCAc                                                                                        >  2:1065942/1‑148 (MQ=255)
                                                          aTTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACtt                                                                                      <  1:2586498/148‑1 (MQ=255)
                                                          aTTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACtt                                                                                      >  2:1989131/1‑148 (MQ=255)
                                                            ttttGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTc                                                                                    <  2:431521/148‑1 (MQ=255)
                                                             tttGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTcc                                                                                   >  1:424154/1‑148 (MQ=255)
                                                                gCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACt                                                                                <  1:566003/148‑1 (MQ=255)
                                                                 cGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTc                                                                               <  1:3073932/148‑1 (MQ=255)
                                                                   tAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCg                                                                             <  1:25340/148‑1 (MQ=255)
                                                                   tAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGATAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCg                                                                             <  1:26274/148‑1 (MQ=255)
                                                                    aaGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGa                                                                            >  1:3118019/1‑148 (MQ=255)
                                                                    aaGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGa                                                                            <  1:2034612/148‑1 (MQ=255)
                                                                     aGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGAt                                                                           >  1:2818015/1‑148 (MQ=255)
                                                                      gCCTTATTTTCTGCGTATTATCTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATg                                                                          <  1:1915650/148‑1 (MQ=255)
                                                                         ttATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGaa                                                                       <  1:3203603/148‑1 (MQ=255)
                                                                         ttATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGaa                                                                       <  1:297348/148‑1 (MQ=255)
                                                                          tATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGaaa                                                                      >  1:906329/1‑148 (MQ=255)
                                                                           aTTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAAt                                                                     >  1:2460782/1‑148 (MQ=255)
                                                                           aTTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAAt                                                                     >  2:2768963/1‑148 (MQ=255)
                                                                           aTTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAAt                                                                     >  1:2477928/1‑148 (MQ=255)
                                                                             tttATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATAc                                                                   >  1:3556648/1‑148 (MQ=255)
                                                                                aTGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCa                                                                <  2:1013847/148‑1 (MQ=255)
                                                                                aTGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCa                                                                <  2:1385015/148‑1 (MQ=255)
                                                                                 tGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCaa                                                               <  1:1384604/148‑1 (MQ=255)
                                                                                     tattatGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCaatgaa                                                           >  1:3057082/1‑148 (MQ=255)
                                                                                        tatGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGc                                                        >  2:1353786/1‑148 (MQ=255)
                                                                                        tatGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGc                                                        >  1:692441/1‑148 (MQ=255)
                                                                                        tatGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGc                                                        <  1:1755106/148‑1 (MQ=255)
                                                                                          tGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTg                                                      >  1:2102549/1‑148 (MQ=255)
                                                                                                 tCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGTTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCt                                               <  1:2595122/148‑1 (MQ=255)
                                                                                                  cAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCtt                                              <  2:1751416/148‑1 (MQ=255)
                                                                                                  cAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCtt                                              >  1:1963034/1‑148 (MQ=255)
                                                                                                   aGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTc                                             >  1:511891/1‑148 (MQ=255)
                                                                                                       aaGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCAt                                         >  1:2124775/1‑148 (MQ=255)
                                                                                                         gTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATtc                                       >  1:3148255/1‑148 (MQ=255)
                                                                                                         gTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATtc                                       >  1:3412205/1‑148 (MQ=255)
                                                                                                            taaataaaCGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATtcatc                                    <  2:3325791/148‑1 (MQ=255)
                                                                                                            taaataaaCGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATtcatc                                    >  2:949146/1‑148 (MQ=255)
                                                                                                               ataaaCGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCAcc                                 <  2:1483531/148‑1 (MQ=255)
                                                                                                                taaaCGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCAccc                                >  1:2256963/1‑148 (MQ=255)
                                                                                                                taaaCGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCAccc                                >  1:615471/1‑148 (MQ=255)
                                                                                                                   aCGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCaaa                             <  1:2925102/148‑1 (MQ=255)
                                                                                                                    cGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCaaaa                            >  1:3484236/1‑148 (MQ=255)
                                                                                                                    cGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCaaaa                            <  1:1694651/148‑1 (MQ=255)
                                                                                                                    cGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCaaaa                            <  1:685222/148‑1 (MQ=255)
                                                                                                                    cGAGCCTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCaaaa                            <  2:2632071/148‑1 (MQ=255)
                                                                                                                         cTCGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTAt                       <  1:2371900/148‑1 (MQ=255)
                                                                                                                           cGCAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTAttt                     <  1:3381700/148‑1 (MQ=255)
                                                                                                                             cAATGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAg                   <  2:2573484/148‑1 (MQ=255)
                                                                                                                               aTGCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGt                 >  2:691276/1‑148 (MQ=255)
                                                                                                                                 gCGGCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTAc               >  1:386942/1‑148 (MQ=255)
                                                                                                                                    gCTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATg            >  1:2143961/1‑148 (MQ=255)
                                                                                                                                     cTAATATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGc           <  1:284870/148‑1 (MQ=255)
                                                                                                                                       aaTATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCtt         <  2:26456/148‑1 (MQ=255)
                                                                                                                                       aaTATTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCtt         <  1:3273201/148‑1 (MQ=255)
                                                                                                                                          atTCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCttttt      >  2:778485/1‑148 (MQ=255)
                                                                                                                                           ttCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCtttttt     >  1:800533/1‑148 (MQ=255)
                                                                                                                                           ttCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCtttttt     >  1:800548/1‑148 (MQ=255)
                                                                                                                                            tCATTAAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCTTTTTTg    <  2:2210002/148‑1 (MQ=255)
                                                                                                                                                 |                                                                                                                                                
AAATCATTATCATTTCCTTATGGTTGCAGATAAAACATATTATATTTTTATGTGTTCCATTTTTGCGTAAGCCTTATTTTATGCGTATTATGTCGCGTCAGAAAAGTATAAATAAACGAGCCTCGCAATGCGGCTAATATTCATTTAATGAATATTTAAGGATAAATTATATGGACATGGAGTCGCAAAAAATATTGTTTGCACTTTCCACTCCGATGGAAATACGCAATGAATGCTGTTTACCTTCGCATTCATCACCCAAAATGTATTTAGGTACATGCTTTTTTGAC  >  CP009273/671997‑672286

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑