| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 809,212 | G→T | 100% | M77I (ATG→ATT) | uvrB → | excinulease of nucleotide excision repair, DNA damage recognition component |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 809,212 | 0 | G | T | 96.0% | 558.8 / 12.4 | 186 | M77I (ATG→ATT) | uvrB | excinulease of nucleotide excision repair, DNA damage recognition component |
| Reads supporting (aligned to +/- strand): ref base G (2/6); new base T (60/118); total (62/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.21e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 186 total aligned reads displayed.
AAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTC > CP009273/809067‑809355 | aaGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTaa > 2:372247/1‑148 (MQ=255) aTGGCCTGGCGCACCAGACGTTACTTGGCGTGCCTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑CAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAaga < 2:2578687/148‑1 (MQ=255) ggCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGt < 2:3260435/148‑1 (MQ=255) gCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGtt > 1:106389/1‑148 (MQ=255) gCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGtt > 1:2961082/1‑148 (MQ=255) tGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGttctt < 1:2422941/148‑1 (MQ=255) tGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGttctt < 1:2504241/148‑1 (MQ=255) tGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGttctt > 2:1640193/1‑148 (MQ=255) tGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGttctt < 2:2476370/148‑1 (MQ=255) tGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGttctt < 2:2476420/148‑1 (MQ=255) tGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGttctt < 2:745460/148‑1 (MQ=255) tGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGttctt > 2:851289/1‑148 (MQ=255) ggCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGttcttc < 2:3174819/148‑1 (MQ=255) gcgcACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTcc < 2:19930/148‑1 (MQ=255) cAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGaaa < 1:1793123/148‑1 (MQ=255) cAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGaaa < 1:2725878/148‑1 (MQ=255) aGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGaaaa < 1:2526367/148‑1 (MQ=255) aGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGCACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGaaaa > 1:3409997/1‑148 (MQ=255) aCGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAAcg < 1:3367243/148‑1 (MQ=255) aCGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAAcg < 2:91154/148‑1 (MQ=255) ttACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCgg < 1:2162282/148‑1 (MQ=255) tGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGaa > 2:391195/1‑148 (MQ=255) gCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAata < 1:2280993/148‑1 (MQ=255) gCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAata < 2:401886/148‑1 (MQ=255) gCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAata < 1:444534/148‑1 (MQ=255) gCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAata > 2:2315685/1‑148 (MQ=255) gTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATAtt < 2:1110223/148‑1 (MQ=255) tGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATAttt < 2:3307106/148‑1 (MQ=255) cTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGt < 1:1068591/148‑1 (MQ=255) ggCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGttt < 1:3114079/148‑1 (MQ=255) cTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTcc < 1:1439769/148‑1 (MQ=255) cAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCcta > 1:1635984/1‑148 (MQ=255) cAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCcta < 1:3137476/148‑1 (MQ=255) aGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCctac < 2:1346603/148‑1 (MQ=255) ggAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCctacta < 1:1431730/148‑1 (MQ=255) ggAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCctacta < 2:510068/148‑1 (MQ=255) aaaCCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGa < 1:1013989/148‑1 (MQ=255) aCCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGact > 1:3387195/1‑148 (MQ=255) ccTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGacta < 2:1141764/148‑1 (MQ=255) cctCACCCTTGCCAATGTGATTTCGGTCCATCAGCGCCCAAACCTGGTAATTGCGCCCAACAAAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGacta < 2:3061896/146‑1 (MQ=255) ttCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGactact < 1:2348482/148‑1 (MQ=255) tCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGActacta > 2:2355732/1‑148 (MQ=255) cACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTAt < 1:2643755/148‑1 (MQ=255) aCCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATc < 2:206196/148‑1 (MQ=255) ccATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AACACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCa < 2:1637633/148‑1 (MQ=255) cATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAg < 2:1509600/148‑1 (MQ=255) cATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAg < 2:1508935/148‑1 (MQ=255) aTTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATTTTTCGTTTCCTACTACGACTACTATCAGc < 1:2382373/148‑1 (MQ=255) ttGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGcc > 1:2761225/1‑148 (MQ=255) tGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAACCGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCg < 1:228538/148‑1 (MQ=255) cAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGaa < 1:3483733/148‑1 (MQ=255) aTGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGc < 2:3129439/148‑1 (MQ=255) aTGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGc < 2:2783244/148‑1 (MQ=255) aTGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGc > 1:1585259/1‑148 (MQ=255) aTGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGc < 2:147598/148‑1 (MQ=255) aTGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGc < 2:2968115/148‑1 (MQ=255) gTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCt > 1:2430796/1‑148 (MQ=255) gTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCt < 2:1750665/148‑1 (MQ=255) tCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTa < 2:3464312/148‑1 (MQ=255) tCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTa < 2:1838616/148‑1 (MQ=255) cTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTAcc > 2:3512984/1‑148 (MQ=255) aCCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAg < 2:1635187/148‑1 (MQ=255) aCCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAg > 1:1538223/1‑148 (MQ=255) aCCTTCAGCGCCCAACCATGGGACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAg < 2:2835354/148‑1 (MQ=255) cTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGtt < 1:2717218/148‑1 (MQ=255) tCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTcc > 2:1188025/1‑148 (MQ=255) cccAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACt > 2:698212/1‑148 (MQ=255) cccAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACt > 1:901359/1‑148 (MQ=255) cccAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACt < 2:293154/148‑1 (MQ=255) cccAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACt < 1:3229343/148‑1 (MQ=255) ccAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACtt > 1:2475628/1‑148 (MQ=255) ccAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACtt < 1:2348127/148‑1 (MQ=255) ccAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACtt < 1:2924803/148‑1 (MQ=255) cAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACttt < 1:1932066/148‑1 (MQ=255) aCCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCa < 2:1067523/148‑1 (MQ=255) aCCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCa < 1:2344151/148‑1 (MQ=255) aCCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCa < 1:2993330/148‑1 (MQ=255) aCCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCa > 2:1321552/1‑148 (MQ=255) ggTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTgag > 1:3428903/1‑148 (MQ=255) tACTTGCGCCCAAC‑AAACCGCTGGCGGCCCAGCTGTTTGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTTCTATCTGCCGGAAGCCTATGTACAGAGTTCCGACACTTTCATTGAGaa < 2:1450523/148‑1 (MQ=255) cTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAg > 1:1928402/1‑148 (MQ=255) ttGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGa < 2:605387/148‑1 (MQ=255) ttGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGa < 1:658035/148‑1 (MQ=255) gcgcCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATg < 1:1581922/148‑1 (MQ=255) gcCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCTGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGcc < 2:1951166/148‑1 (MQ=255) gcCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGcc < 2:500550/148‑1 (MQ=255) cccAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCt < 2:1431734/148‑1 (MQ=255) aaCGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAAc > 2:2731287/1‑148 (MQ=255) cGCTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGa < 2:2075915/148‑1 (MQ=255) gCTGGCGGCCCAGCTGTATGGCGAAATTAAAGACTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGaa < 1:3464071/148‑1 (MQ=255) cTGGCGGCCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAAc < 1:2317034/148‑1 (MQ=255) gcggcCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACata < 2:3352434/148‑1 (MQ=255) gcggcCCAGCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACata > 2:2520064/1‑148 (MQ=255) gCTGTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAg > 1:2677712/1‑148 (MQ=255) gTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATg < 2:2879860/148‑1 (MQ=255) gTATGGCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTGTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGCGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATg < 2:2880236/148‑1 (MQ=255) gCGAAATTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGttt > 2:19376/1‑148 (MQ=255) aaaTTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTc < 1:634726/148‑1 (MQ=255) aaaTTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTc > 1:1151306/1‑148 (MQ=255) aaaTTAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTc > 1:3102236/1‑148 (MQ=255) | AAGATGGCCTGGCGCACCAGACGTTACTTGGCGTGACTGGCTCAGGGAAAACCTTCACCATTGCCAATGTCATTGCTGACCTTCAGCGCCCAACCATGGTACTTGCGCCCAAC‑AAAACGCTGGCGGCCCAGCTGTATGGCGAAATGAAAGAGTTCTTCCCGGAAAACGCGGTGGAATATTTCGTTTCCTACTACGACTACTATCAGCCGGAAGCCTATGTACCGAGTTCCGACACTTTCATTGAGAAAGATGCCTCGGTTAACGAACATATTGAGCAGATGCGTTTGTC > CP009273/809067‑809355 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |