| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,116,548 | T→A | 94.8% | intergenic (‑137/+150) | bssS ← / ← dinI | biofilm regulator/DNA damage‑inducible protein I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,116,548 | 0 | T | A | 94.8% | 728.0 / 22.5 | 229 | intergenic (‑137/+150) | bssS/dinI | biofilm regulator/DNA damage‑inducible protein I |
| Reads supporting (aligned to +/- strand): ref base T (2/10); new base A (116/101); total (118/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.64e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.83e-01 | |||||||||||
Only 100 of 233 total aligned reads displayed.
TTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTTAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCAAAAAAAATCACT > CP009273/1116403‑1116692 | tttCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTTAAGa < 1:3179085/148‑1 (MQ=255) ttCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGAt < 2:202598/148‑1 (MQ=255) ccATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGAttt < 2:2782104/148‑1 (MQ=255) ccATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGAttt < 1:1390231/148‑1 (MQ=255) ccATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGAttt < 2:1006919/148‑1 (MQ=255) tcatGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTtata < 1:941818/148‑1 (MQ=255) tGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGa < 2:933776/148‑1 (MQ=255) tGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGa > 2:2714824/1‑148 (MQ=255) ggCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGaa < 2:1697446/148‑1 (MQ=255) cccccTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACa < 2:2281223/148‑1 (MQ=255) cccTAATTAGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAAt < 1:1670193/148‑1 (MQ=255) ccTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATa < 1:989790/148‑1 (MQ=255) tAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATaaa < 1:720316/148‑1 (MQ=255) aaTTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATaaaa > 2:3105596/1‑148 (MQ=255) aaTTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATaaaa > 2:841973/1‑148 (MQ=255) aaTTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATaaaa > 1:2263633/1‑148 (MQ=255) ttCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACa > 1:415941/1‑148 (MQ=255) ttCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACa > 1:1102158/1‑148 (MQ=255) gtCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACa < 2:2731820/147‑1 (MQ=255) tCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAg > 1:662467/1‑148 (MQ=255) tCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAg > 2:2638725/1‑148 (MQ=255) tgtTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCAt > 1:1022264/1‑148 (MQ=255) tgtTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCAt > 2:489330/1‑148 (MQ=255) ttACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGt < 1:1858004/148‑1 (MQ=255) ttACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGt > 2:2821133/1‑148 (MQ=255) ttACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGt > 2:2922839/1‑148 (MQ=255) tACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGtc > 2:81721/1‑148 (MQ=255) tACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGtc < 1:3554943/148‑1 (MQ=255) tACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGtc > 1:2074707/1‑148 (MQ=255) cTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGtcat > 1:2316806/1‑148 (MQ=255) aCGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATAtt < 1:2997121/148‑1 (MQ=255) cGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATAttt > 2:2007773/1‑148 (MQ=255) ttATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTTAAGATTTATATGAACAATAAAACAGCATGTCATTCATAttttt < 2:2834667/148‑1 (MQ=255) ttCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTa > 2:126318/1‑148 (MQ=255) cGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGc < 2:1727801/148‑1 (MQ=255) aGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCat < 1:2292172/148‑1 (MQ=255) gCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCaa > 1:1457095/1‑148 (MQ=255) cGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTTCAat > 2:1991362/1‑148 (MQ=255) tttttATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAatta < 1:2557308/148‑1 (MQ=255) tttttATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAatta > 2:3279833/1‑148 (MQ=255) ttttATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAattat < 2:836939/148‑1 (MQ=255) ttATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTAttt > 1:1592877/1‑148 (MQ=255) aTCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTg > 2:3380446/1‑148 (MQ=255) tCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGa > 2:3361841/1‑148 (MQ=255) aaGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGaa < 1:828826/148‑1 (MQ=255) gCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTAAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGaatt > 1:2442309/1‑146 (MQ=255) cAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAgg < 1:1410302/143‑1 (MQ=255) cAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAgg > 2:1410302/1‑143 (MQ=255) cAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAgtg < 2:1053278/148‑1 (MQ=255) cAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAgtg < 2:1111188/148‑1 (MQ=255) cTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAg > 1:1757442/1‑148 (MQ=255) cTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAg < 1:1491646/148‑1 (MQ=255) aGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAAt < 2:294873/148‑1 (MQ=255) aGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAAt > 1:2020641/1‑148 (MQ=255) tataCCAATAAGTAAGTGTATTCACCGAATTTTTAAAGGTGGAAACAGATAAATTTATGCTTTAAATATTTATATGAACAATAAAACAGCATGTAATTCATATTTTTTTAGCATATTGTGCAATTATTTTTAGGAATTGTAGAAAttt < 2:626966/148‑1 (MQ=255) tataCCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAAttt > 2:242044/1‑148 (MQ=255) tataCCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAAttt > 1:1304483/1‑148 (MQ=255) taCCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTTAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTg < 2:2263722/148‑1 (MQ=255) taCCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTg > 2:3416842/1‑148 (MQ=255) aCCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGt < 1:2039491/148‑1 (MQ=255) aaTAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACt < 2:1083136/148‑1 (MQ=255) taagtaagGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCa > 1:555031/1‑148 (MQ=255) aagtaagGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCaa < 1:3503545/148‑1 (MQ=255) gtaagGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCaaaa > 2:3513138/1‑148 (MQ=255) gtaagGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATCTCATTCATATATTTTTAGAAAATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCaaaa > 1:368723/1‑148 (MQ=255) taagGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAAt > 2:1944016/1‑148 (MQ=255) aagGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAAtt < 1:743404/148‑1 (MQ=255) agGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTc > 2:2901971/1‑148 (MQ=255) gggTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCg < 2:1380353/148‑1 (MQ=255) ggTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCgt > 2:2185998/1‑148 (MQ=255) tATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCgtaa < 2:2790460/148‑1 (MQ=255) cGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGtaaaat > 1:379817/1‑148 (MQ=255) cGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGtaaaat > 1:379918/1‑148 (MQ=255) cGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGtaaaat < 2:415941/148‑1 (MQ=255) cGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGtaaaat < 2:1898579/148‑1 (MQ=255) tttAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATaaaaaa > 1:1673115/1‑148 (MQ=255) tttAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATaaaaaa < 2:1133391/148‑1 (MQ=255) ttAAAGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAg < 1:147721/148‑1 (MQ=255) aaaGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGcc < 2:115677/148‑1 (MQ=255) aaGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCg < 1:3218639/148‑1 (MQ=255) aGGGGGAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCgg > 2:3411202/1‑148 (MQ=255) ggggAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCgggg > 1:1242426/1‑148 (MQ=255) gAAACAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGa > 2:2841997/1‑148 (MQ=255) aCAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGAATATTGTTCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGAccc > 1:3411214/1‑148 (MQ=255) cAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGGAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCAGGGGCGACCCg > 2:23590/1‑148 (MQ=255) cAGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCg > 2:20978/1‑148 (MQ=255) ataTAAATTTCTGCTTTAAATATTTATATGAACAATAAAACCGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGGGTAGAACTTTTGTACTCAAAATTCGTAATTAAAATAAAAAAGCCGGGGCGACCCgg < 2:2346945/146‑1 (MQ=255) aGATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCgg > 1:2864620/1‑148 (MQ=255) gATAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGc > 2:3304716/1‑148 (MQ=255) aTAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAATATAAAAAAGCCGGGGCGACCCGGCa > 2:1417436/1‑148 (MQ=255) aTAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCa > 1:103895/1‑148 (MQ=255) aTAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCa > 1:2952428/1‑148 (MQ=255) tAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATCTTTTTTTAGCATATAGTGCAATTATTTTGAGGAAGAGAAGAAATTTTGTACTCAAAATACGTAAGTAAAATAAAAAAGCAGGGGCGACCCGGCaa > 2:78676/1‑148 (MQ=255) tAAATTTCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCaa > 1:2678961/1‑148 (MQ=255) ttCTGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCaaaaaaa < 2:2722553/148‑1 (MQ=255) tGCTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCAAAAAAAATc > 2:3151402/1‑148 (MQ=255) gatttaAATATTTATATGAAAAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGTAAGTGTAGAAATTTTGTACTCAAAATTCGTAATTAAAATAAAAAAGCCGGGGCGACCCGGCAAAAAAAATCa < 2:1679117/146‑1 (MQ=255) cTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCAAAAAAAATCAc > 1:814521/1‑148 (MQ=255) cTTTAAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCAAAAAAAATCAc > 1:1783467/1‑148 (MQ=255) tttaAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCAAAAAAAATCACt < 2:433568/148‑1 (MQ=255) | TTTTTCCATCATGGCCCCCTAATTCGTGTTACTAGACAACGTTATTCGAGGTTCAATGCGTTTTTATCTGAAGCAACTTCAGTATACCAATAAGTAAGGGTATTCACCGAATTTTTAAAGGGGGAAACAGATAAATTTCTGCTTTTAAGATTTATATGAACAATAAAACAGCATGTCATTCATATTTTTTTAGCATATTGTGCAATTATTTTGAGGAAGTGTAGAAATTTTGTACTCAAAATTCGTAAGTAAAATAAAAAAGCCGGGGCGACCCGGCAAAAAAAATCACT > CP009273/1116403‑1116692 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |