| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,386,008 | G→T | 100% | Q35K (CAG→AAG) | ycjY ← | S9 homolog non‑peptidase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,386,008 | 0 | G | T | 100.0% | 717.9 / ‑6.7 | 230 | Q35K (CAG→AAG) | ycjY | S9 homolog non‑peptidase family protein |
| Reads supporting (aligned to +/- strand): ref base G (3/0); new base T (98/128); total (102/128) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 233 total aligned reads displayed.
ACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTG > CP009273/1385864‑1386152 | aCTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTtata < 1:3102351/148‑1 (MQ=255) cTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATAc < 1:1499349/148‑1 (MQ=255) gACGCTGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTg < 2:157905/148‑1 (MQ=255) gACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTg < 2:2937288/148‑1 (MQ=255) cTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGtt < 1:2991441/148‑1 (MQ=255) cTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTTTTGTTTTAACCCCCCCCCAGGGTGAGATAACAC‑CAATTCCAGATAATGACGGGtt > 1:1930584/1‑148 (MQ=255) cgccgcCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTtc > 2:537463/1‑148 (MQ=255) gccgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCGGGGGGGGATAAAACAAATTGCGT‑ATAATGAAGGGtttaa > 1:1632504/1‑146 (MQ=255) ccgccACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTtcat < 1:1536621/148‑1 (MQ=255) ttCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAAtttt < 2:1789179/148‑1 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGa < 1:437667/148‑1 (MQ=255) aCCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGa < 1:2852736/148‑1 (MQ=255) ccTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGGTCGTTAACGCCCCCCCCGGGGTGAGATAACAC‑AAATGCCGTATACTGACGGGGTTCATAAAATTTTGGAg > 2:1315611/1‑148 (MQ=255) ttGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAAAGCCCCCACCCGGGTGAGATAACAC‑AAATTCCGTATAATTAAGGGTTTCATGAAATTTTTGTggg > 2:645074/1‑148 (MQ=255) ttGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAggg < 2:2380573/148‑1 (MQ=255) tGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAAAGCCCCCACCTGGGGGAGATAACAC‑AATTGCCGTATACTGACGGGTTTCATCAAATTTTGGAGGGa > 2:1945753/1‑148 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAAt < 1:3329800/148‑1 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTTGTGTTTTACGCCCCCACCGGGGGGGGATTACCC‑ACATGCGTTATAATGAAGGGTGTGAACAAAATGTGGGGGGGAAt > 1:2398297/1‑148 (MQ=255) tAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCGGGGGGAGATAAACA‑AAATGCCTTATAAAGACGGGTTTAATCAAATTTTTGAGGGTAAt > 2:1221214/1‑148 (MQ=255) aaGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCGGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATa > 2:193418/1‑148 (MQ=255) aGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAg < 1:2165941/148‑1 (MQ=255) gATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGa < 1:2670654/148‑1 (MQ=255) gATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCGGGGTGGGATAACAC‑AAATGCCTTAAACAGTCGGGTTTGATCAAATTTTGGGGGGAAATata > 1:845156/1‑146 (MQ=255) gATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTATTTAAAGCCCCCACCGGGGTGTGATAACAC‑AAATGCCTTATAATGACGGGTTTAATGAAATTTTTGAGGGAAATAGa > 2:1388054/1‑148 (MQ=255) gCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCa < 1:1841773/148‑1 (MQ=255) gCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCGGGGTGCGATAACAC‑CATTGCCTTATCCTGACGGGTTTCATCAAATTTTGGAGGGAACTAGAtaa > 2:2829344/1‑146 (MQ=255) cGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCAc < 2:601837/148‑1 (MQ=255) tCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTATTTTAAGCCCCCCCCGGGGTGTGATAAAAA‑AATTGCCTTATAAAGAAGGGTTTAATAAAATTTTTTTTGGAAATAGTTAACTg > 1:565931/1‑148 (MQ=255) cATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGc < 2:3277576/148‑1 (MQ=255) cATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGc < 1:125379/148‑1 (MQ=255) cATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCGGGGTGAGTTAACAC‑AATTGCCGGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGc > 1:3248006/1‑148 (MQ=255) aTAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAACGCCCCCACCGGGGTGAGATAACAA‑AATTGCCGTATACAGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACAGCa > 2:148248/1‑148 (MQ=255) tAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAg < 2:249407/148‑1 (MQ=255) tAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCGGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAg > 2:2768339/1‑148 (MQ=255) aaaGCAATAGTGACAAATCCCTTTTCAGCCAGTTTTTTGGCATAGGTTCCGGCCCTTAGTTCTTTAAAGCCCCCAACTGGGTGAGATAACAC‑AATTGCCTTTTAATCACGGGTTTCATCAAAATTTGGATGGAAATATATCACTTCat > 2:2959912/2‑147 (MQ=255) aaGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCCCCAGGGGGGGGTTACAC‑AAATGGCGGATTCTGACGGGTTTGTTAACAATTTGGTGGGGAATATATAACAGCAGa > 1:1000272/1‑148 (MQ=255) aGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTTAAGCCCCCCCCGGGGGGTGATAAAAC‑AAATTGCTTATACTTACGGGGTTCATCAAATTTTTGTGGGAAATATATCACTGCAGAc > 1:1719631/1‑148 (MQ=255) gCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTGTTTAAAGCCCCCACCTGGGTGAGATAACAC‑AAATTCCTTATACTGACGGGGTTCATCAAATTTTGGAGGGAAAAAGATCACTGCAGACa > 2:3049625/1‑148 (MQ=255) gCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTGTTTAAAGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTAAAATGACGGGTTTCATAAAATTTTTGAGGGAAATAGATCACTGCAGACa > 2:3129275/1‑148 (MQ=255) aaTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTTGAGGGAAATATATCACTGCCGACaaa > 2:141922/1‑148 (MQ=255) aaTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACaaa < 1:882791/148‑1 (MQ=255) aTAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAag < 2:401937/148‑1 (MQ=255) tAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAaga < 1:668904/148‑1 (MQ=255) aGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAagag < 1:2582623/148‑1 (MQ=255) aGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCAGGGTGTGATAAAAC‑AAATTCCTTATACTGACGGGGTTCATCAAAATTTGGAGGGAAATAGATCACTGCAGACAAagag > 2:162581/1‑148 (MQ=255) gACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTTTTCTTTAACGCCCCCACCTGGGTGAGAAAAAAC‑AAATGCCTTATAAAGACGGGTTTAATCAAATTTTGGAGGGAAATAGATAACTGCAGACAAagaaaag > 2:401599/1‑144 (MQ=255) gACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATg < 2:1639936/148‑1 (MQ=255) aaTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTg < 1:3125431/148‑1 (MQ=255) aaTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTATTTAAAGCCCCCACCTGGGTGAGATAACAC‑AAATGCCTTATAATGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACAGCAGACAAAGAGATGGGTg > 2:2173039/1‑148 (MQ=255) aTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTgg < 1:2992023/148‑1 (MQ=255) aTCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTCTTTAAAGCCCCCACCAGGGTGAGCTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACAGCAGACAAAGAGATTGTTgg > 2:801567/1‑148 (MQ=255) cTTTTCCGCCAGTTTTTGGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGatta < 2:289844/148‑1 (MQ=255) ttttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGattat < 1:1322806/148‑1 (MQ=255) tttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTGTGTTTTTTTAAGCCCCCCCCGGGGTGAGATAACAA‑AAATGGCTTAAACATACGGGTTTGATAAAAATTTTGTGGGAAATAAATAAATTCAGAACAACGTATGGGTGGgttatt > 2:911732/1‑148 (MQ=255) ttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTg < 2:208375/148‑1 (MQ=255) ttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTg < 2:2013974/148‑1 (MQ=255) ttCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AAGTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTg < 1:1855457/148‑1 (MQ=255) cGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTg < 2:2039901/148‑1 (MQ=255) gCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGt < 2:1074796/148‑1 (MQ=255) aGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAAAGCCCCCACCTGGGTGATATAAAAA‑AAATTCCTTATAATGACGGGTTTAATAAAATTTTGGAGGGAAATATATAACTGCAGACAAATAGATGGTTGGTTTATTTATGTTAg > 2:1041327/1‑148 (MQ=255) ttttttGGCATAGGTTCCGGCCGTGTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTTCCTTATACTGACGGGTTTAATAAAATTTTTGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGtt > 2:2070415/1‑147 (MQ=255) tttttGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGa < 2:257165/148‑1 (MQ=255) gCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGa < 1:2937851/148‑1 (MQ=255) aTAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACt < 2:1261723/148‑1 (MQ=255) aTAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACt < 2:2642009/148‑1 (MQ=255) aGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCAGGGTGAGATAAAAC‑AAATGCCATATACTGACGGGGTTCATCAAATTTTGGAGGGAAAAAGATCACTGCAGACAAACAGAAGGTTGGATTATTGCTTTTATTGAAGCAGACttt > 2:3157320/1‑148 (MQ=255) gTTCCGGCCGTGTGTTCTTTAAAGCCCCCACCAGGGTGAGATAACAC‑AAATTCCGTATACTGACGGGTTTCATCAAATTTTGGGGGGCAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGATGTTATTGAAGCTGACTttat > 2:1125070/1‑148 (MQ=255) ccGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTtattat < 2:3187101/148‑1 (MQ=255) gCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtca < 1:2374212/148‑1 (MQ=255) cGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATtcatc > 2:2249233/1‑148 (MQ=255) ttGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCAtt < 1:1139826/148‑1 (MQ=255) tGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTc < 1:1038956/148‑1 (MQ=255) ttCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCg < 2:2517976/148‑1 (MQ=255) ttCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCg > 2:3369302/1‑148 (MQ=255) ttCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCg > 2:3494375/1‑148 (MQ=255) tCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATGACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGt < 1:2072033/148‑1 (MQ=255) tCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGt < 1:2348135/148‑1 (MQ=255) tCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGt < 1:2482532/148‑1 (MQ=255) aaCGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTc < 1:2895739/148‑1 (MQ=255) aCGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCa > 1:543622/1‑148 (MQ=255) cccccACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATgg < 2:2830812/148‑1 (MQ=255) ccACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGt > 2:713917/1‑148 (MQ=255) ccACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGt > 1:1410589/1‑148 (MQ=255) ccACCTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGt < 2:2696241/148‑1 (MQ=255) ccTGGGTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGt < 2:3547614/148‑1 (MQ=255) ggTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGt > 1:1287254/1‑148 (MQ=255) ggTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGt < 2:1719631/148‑1 (MQ=255) ggTGAGATAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGt < 1:94051/148‑1 (MQ=255) gagaTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCg > 2:328598/1‑148 (MQ=255) gaTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtt < 2:1295102/148‑1 (MQ=255) gaTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtt > 2:480872/1‑148 (MQ=255) gaTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGtt < 2:1479370/148‑1 (MQ=255) aTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGttt > 1:3031952/1‑148 (MQ=255) aTAACAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGttt < 1:2250225/148‑1 (MQ=255) aaCAC‑AATTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTa > 2:1582494/1‑148 (MQ=255) aaTTGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACggg > 1:1899291/1‑147 (MQ=255) ttGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTg < 1:193418/148‑1 (MQ=255) ttGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTg < 1:347838/148‑1 (MQ=255) ttGCCTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTg > 2:2997184/1‑148 (MQ=255) ccTTATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTg < 2:1025353/148‑1 (MQ=255) | ACTGACGCGGCTCGCCGCCACTTTCACCTTGATAAGATGCGTCATAAGCAATAGTGACAAATCCCTTTTCCGCCAGTTTTTTGGCATAGGTTCCGGCCGTTTGTTCTTTAACGCCCCCACCTGGGTGAGATAACAC‑AATTGCCTGATACTGACGGGTTTCATCAAATTTTGGAGGGAAATAGATCACTGCAGACAAAGAGATGGTTGGATTATTGCTGTTAGTGAAGCTGACTTTATTATTCATCATTCCGTTCCTCATGGAGTTGTCGGTTCGTTTTAACGGTTGGTG > CP009273/1385864‑1386152 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |