| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,514,177 | G→T | 100% | E298D (GAG→GAT) | curA → | curcumin/dihydrocurcumin reductase, NADPH‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,514,177 | 0 | G | T | 96.2% | 726.9 / 14.9 | 247 | E298D (GAG→GAT) | curA | curcumin/dihydrocurcumin reductase, NADPH‑dependent |
| Reads supporting (aligned to +/- strand): ref base G (7/4); new base T (123/113); total (130/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.46e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 252 total aligned reads displayed.
TGAGCAGCTATAACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAA > CP009273/1514032‑1514321 | tGAGCAGCTATAACGCTACAGAGCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGatat < 1:13202/148‑1 (MQ=255)tGAGCAGCTATAACGCTACAGAGCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGatat > 2:2739930/1‑148 (MQ=255)tGAGCAGCTATAACGCTACAGAGCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGatat > 2:2740054/1‑148 (MQ=255) gAGCAGCTATAACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATg > 2:246064/1‑148 (MQ=255) gcagcTATAACGCTACAGAGCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATggg < 1:2141312/148‑1 (MQ=255) gcagcTATAACGCTACAGAGCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATggg < 2:532526/148‑1 (MQ=255) gcagcTATAACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATggg < 1:47317/148‑1 (MQ=255) gcTATAACGCTACAGAGCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCa < 2:1228891/148‑1 (MQ=255) cTATAACGCTACAGAGCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCaa > 1:2645232/1‑148 (MQ=255) taACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATgg > 1:731819/1‑148 (MQ=255) aaCGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACTTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTAACCGCATACATGAGATTCACAGGGATATGGGGCAATggg > 1:1626103/1‑148 (MQ=255) cGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTg > 2:1599233/1‑148 (MQ=255) gCTACAGAGCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCACTGGGTGa > 2:821611/1‑148 (MQ=255) gCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGa < 1:540627/148‑1 (MQ=255) tACAGAGCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGaaa < 1:2358805/148‑1 (MQ=255) gagCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAgg < 1:3099314/148‑1 (MQ=255) agCTACCTCCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGa < 2:649355/148‑1 (MQ=255) acctccCGGTCCGGATCGTTTACCTCTGTTGATGGCTACATTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGATCAGGATTATGGTCACCGCATCCATGAGTTTCTGAGGGATATGGGGCAATGGGTGAAATAGGATaaa > 1:82773/1‑148 (MQ=255) accaccCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATaaa < 2:2018725/148‑1 (MQ=255) accaccCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATaaa < 2:918470/148‑1 (MQ=255) ctcccGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAAt < 2:1416180/146‑1 (MQ=255) caccCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGTGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAAt > 1:299195/1‑148 (MQ=255) tcccGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATc > 2:288121/2‑148 (MQ=255) ccGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCa < 1:3214260/148‑1 (MQ=255) ggTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACt > 1:1790588/1‑148 (MQ=255) tCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCACTAc < 1:2587488/148‑1 (MQ=255) ccGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTAcc > 2:3380027/1‑148 (MQ=255) gATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACcgcg > 2:618566/1‑148 (MQ=255) aTCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCga < 1:132551/148‑1 (MQ=255) tCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCgaa < 1:1564367/148‑1 (MQ=255) cGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCgaag > 1:2107026/1‑148 (MQ=255) tttACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCgaagaa > 2:1766307/1‑148 (MQ=255) ttACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGaaa < 2:2828350/148‑1 (MQ=255) ttACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGaaa < 2:2912722/148‑1 (MQ=255) tACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAAt < 1:760670/148‑1 (MQ=255) ctctGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTAc < 1:2194619/148‑1 (MQ=255) ctctGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTAc < 1:1932822/148‑1 (MQ=255) ctctGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAACTTAc > 1:1909337/1‑148 (MQ=255) gTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGAc > 1:3311137/1‑148 (MQ=255) ttGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACg > 2:2453595/1‑148 (MQ=255) ttGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTAATGACg > 2:708225/1‑148 (MQ=255) tGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACgg > 1:295654/1‑148 (MQ=255) gATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGt < 1:1092227/148‑1 (MQ=255) gATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGt < 2:901922/148‑1 (MQ=255) gATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGt < 2:263335/148‑1 (MQ=255) gATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGt < 2:2384929/148‑1 (MQ=255) aTGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGtt < 1:2731147/148‑1 (MQ=255) tGGCTACAGTTCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGttt < 1:2502559/148‑1 (MQ=255) gCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTag < 2:379262/148‑1 (MQ=255) aCAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAgaga > 1:284545/1‑148 (MQ=255) aCAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAgaga < 1:1788530/148‑1 (MQ=255) cAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGaa > 2:2572571/1‑148 (MQ=255) tGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCAGGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATgc > 2:3125734/1‑148 (MQ=255) aaaaCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAg > 1:2904936/1‑148 (MQ=255) aaaCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGa > 2:1004713/1‑148 (MQ=255) aaaCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGa < 1:989599/148‑1 (MQ=255) aaaCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTGTAGAGAATGCGCCACAGa > 2:3060054/1‑148 (MQ=255) aaCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGAc > 1:3234346/1‑148 (MQ=255) aCGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACg > 1:276888/1‑148 (MQ=255) tATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGttt < 1:2277072/148‑1 (MQ=255) aTTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTa < 1:268884/148‑1 (MQ=255) ttCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTAt < 2:2299253/148‑1 (MQ=255) cGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCg > 1:2570957/1‑148 (MQ=255) cTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGc < 1:709995/148‑1 (MQ=255) ttGCAATGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGTCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGATATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGcc < 2:2232342/148‑1 (MQ=255) gCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCctg > 2:446468/1‑148 (MQ=255) ggTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGa > 2:1955118/1‑148 (MQ=255) ggTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGa > 2:638862/1‑148 (MQ=255) gTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGaa < 2:1979552/148‑1 (MQ=255) gTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGaa < 1:1393283/148‑1 (MQ=255) ttttATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAg > 2:1684/1‑148 (MQ=255) tttATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAgg > 1:2161977/1‑148 (MQ=255) tattatCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGt < 2:1625529/148‑1 (MQ=255) attatCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTa > 2:483900/1‑148 (MQ=255) ttatCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaa > 1:2748384/1‑148 (MQ=255) atCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaaaa > 2:3377245/1‑148 (MQ=255) atCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaaaa < 1:1046115/148‑1 (MQ=255) atCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaaaa < 1:2132545/148‑1 (MQ=255) atCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaaaa < 1:148567/148‑1 (MQ=255) tCGCTCATGATTATGGTCACCGCATCCATGAGTTTCAGTGGGATATGGGGCAATGGGTGAAAGAGTATAAAATCCACTACCGCGAAGAAATTACTTACTGTTTAGAGAATGCGCCACAGACGTTTATCGTCCTGCTGAAGGGTaaaaa < 1:1266375/148‑1 (MQ=255) tCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaaaaa > 1:2086193/1‑148 (MQ=255) tCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTaaaaa > 1:2088660/1‑148 (MQ=255) cGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAAc < 2:295654/148‑1 (MQ=255) cGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAAc > 1:3287291/1‑148 (MQ=255) cTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCAGCTGAAGGGTAAAAACtt < 2:1567945/148‑1 (MQ=255) tCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTc < 2:2679242/148‑1 (MQ=255) ttATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCaaa > 1:3085386/1‑148 (MQ=255) tATGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCCAAg > 2:3372906/1‑148 (MQ=255) tGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgtg < 2:1873570/148‑1 (MQ=255) tGGTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgtg < 2:3311137/148‑1 (MQ=255) gTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgtggt > 2:102408/1‑148 (MQ=255) gTCACCGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAgtggt < 1:3482656/148‑1 (MQ=255) cGCATCCATGAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATcc < 2:2516224/148‑1 (MQ=255) gAGTTTCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCgg > 1:1424179/1‑148 (MQ=255) tttCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGtg < 2:1790588/148‑1 (MQ=255) tttCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGtg < 1:3366159/148‑1 (MQ=255) ttCAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGtga > 2:3437465/1‑148 (MQ=255) cAGAGGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGtgatg < 2:2090603/148‑1 (MQ=255) gagGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTgatgat > 2:2543735/1‑148 (MQ=255) agGGATATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGAtt < 2:3401829/148‑1 (MQ=255) | TGAGCAGCTATAACGCTACAGAGCTACCACCCGGTCCGGATCGTTTACCTCTGTTGATGGCTACAGTGCTGAAAAAACGTATTCGCTTGCAAGGTTTTATTATCGCTCAGGATTATGGTCACCGCATCCATGAGTTTCAGAGGGAGATGGGGCAATGGGTGAAAGAGGATAAAATCCACTACCGCGAAGAAATTACTGACGGTTTAGAGAATGCGCCACAGACGTTTATCGGCCTGCTGAAGGGTAAAAACTTCGGCAAAGTGGTGATCCGCGTGGCGGGTGATGATTAA > CP009273/1514032‑1514321 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |