| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,534,711 | G→T | 7.2% | R713S (CGC→AGC) | narZ ← | nitrate reductase 2 (NRZ), alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,534,711 | 0 | G | T | 7.2% | 761.8 / 22.6 | 206 | R713S (CGC→AGC) | narZ | nitrate reductase 2 (NRZ), alpha subunit |
| Reads supporting (aligned to +/- strand): ref base G (84/107); new base T (6/9); total (90/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.73e-01 | |||||||||||
Only 100 of 211 total aligned reads displayed.
ATCGCTGCAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGT > CP009273/1534566‑1534857 | aTCGCTGCAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGcc > 1:2253430/1‑148 (MQ=255)aTCGCTGCAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGGTAGAGCGcc > 1:466442/1‑148 (MQ=255) cGCTGCAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAg > 2:2406066/1‑148 (MQ=255) cGCTGCAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAg < 2:1381846/148‑1 (MQ=255) gCAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGacaa < 2:3507412/148‑1 (MQ=255) gCAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGacaa > 1:2763702/1‑148 (MQ=255) cAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGacaaa < 1:3067884/148‑1 (MQ=255) cAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGacaaa < 2:2669113/148‑1 (MQ=255) tttGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGacaaacaa > 1:3407166/1‑148 (MQ=255) tttGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGacaaacaa > 1:2409896/1‑148 (MQ=255) tGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAAt > 1:595930/1‑148 (MQ=255) tCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTAcgcg > 1:2077949/1‑148 (MQ=255) aCTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGgat < 1:1175760/148‑1 (MQ=255) aCTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCCCATTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGgat > 1:1873242/1‑148 (MQ=255) cttcttCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCTCCAGACAAACAAATTACGCGgatg < 1:366695/148‑1 (MQ=255) cttcttCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGgatg > 1:364525/1‑148 (MQ=255) cttcttCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGgatg < 1:3237550/148‑1 (MQ=255) cttcttCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGgatg < 2:3294038/148‑1 (MQ=255) ttcttcCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGgatga < 2:3380598/148‑1 (MQ=255) ttcttcCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGgatga < 2:3275873/148‑1 (MQ=255) ttcCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATtg < 2:21832/148‑1 (MQ=255) cGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATtgctg < 2:3465139/148‑1 (MQ=255) cGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATtgctg < 2:1633428/148‑1 (MQ=255) aTCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTAt > 1:183086/1‑148 (MQ=255) tCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGAGTATTGCTGCTGCTATc < 2:1352315/148‑1 (MQ=255) cccGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCt < 2:256432/148‑1 (MQ=255) cGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTgg < 1:2026656/148‑1 (MQ=255) gTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGgt < 2:1282230/148‑1 (MQ=255) gTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGgt < 2:1689954/148‑1 (MQ=255) gTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGgt < 2:1623191/148‑1 (MQ=255) gCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGgttgt < 1:1303142/148‑1 (MQ=255) gCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGgttgt < 1:2714332/148‑1 (MQ=255) gCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGgttgt < 1:937854/148‑1 (MQ=255) cTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGgttgtt < 1:611574/148‑1 (MQ=255) cTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGgttgtt < 1:1101393/148‑1 (MQ=255) tGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTc < 1:1344420/148‑1 (MQ=255) ggCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCg > 2:3193947/1‑148 (MQ=255) cACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCa > 2:688952/1‑148 (MQ=255) gAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGcc < 2:1325438/148‑1 (MQ=255) aGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCa > 1:821605/1‑148 (MQ=255) tCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTa > 2:795154/1‑148 (MQ=255) cGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTaa > 1:2290973/1‑148 (MQ=255) gCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCTCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGACCATACGTaaa > 2:1968286/1‑148 (MQ=255) cccTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAAt < 2:1398457/148‑1 (MQ=255) tGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGc > 2:413831/1‑148 (MQ=255) gCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCGGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTc < 1:2563259/148‑1 (MQ=255) gCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCGGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTc < 1:2562573/148‑1 (MQ=255) tttCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAg < 2:443399/148‑1 (MQ=255) ttCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAgc > 2:2855003/1‑148 (MQ=255) cGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAgcgc < 1:758773/148‑1 (MQ=255) cccAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTggg > 2:3072134/1‑148 (MQ=255) cagcagATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCTCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCg > 1:170993/1‑148 (MQ=255) cagcagATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCg > 2:1048452/1‑148 (MQ=255) agcagATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCTCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCgg < 2:3548944/148‑1 (MQ=255) agcagATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCTCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCgg < 2:1792723/148‑1 (MQ=255) agcagATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCgg > 1:1838547/1‑148 (MQ=255) agcagATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCgg > 1:2711360/1‑148 (MQ=255) agcagATACTTCTGCATATACTCGGGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCTCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCgg < 2:2065537/148‑1 (MQ=255) agATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTaa < 2:2301484/148‑1 (MQ=255) gATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTaaa < 2:2539149/148‑1 (MQ=255) gATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTaaa < 2:2539290/148‑1 (MQ=255) aCTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTc < 2:211783/148‑1 (MQ=255) aCTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTc > 1:1771352/1‑148 (MQ=255) cTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCt > 1:3438094/1‑148 (MQ=255) cTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCt < 1:2697508/148‑1 (MQ=255) ttCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCtg < 2:2015888/148‑1 (MQ=255) tCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCtgt > 2:1506951/1‑148 (MQ=255) tCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCtgt > 1:266377/1‑148 (MQ=255) cTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCtgtg > 2:2694007/1‑148 (MQ=255) gCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTggg > 1:3491/1‑148 (MQ=255) atatACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTggggg > 1:520298/1‑148 (MQ=255) tataCTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGa > 2:1673347/1‑148 (MQ=255) ataCTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGAt > 1:763179/1‑148 (MQ=255) taCTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCTCCAGACAAAAAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATa > 2:1331951/1‑148 (MQ=255) taCTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATa < 1:2749932/148‑1 (MQ=255) taCTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATa < 2:2576954/148‑1 (MQ=255) taCTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATa < 2:2599428/148‑1 (MQ=255) aCTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCTCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATaa > 1:3283120/1‑148 (MQ=255) tGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCgg > 1:943697/1‑148 (MQ=255) ggCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGGTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGc < 1:3275439/148‑1 (MQ=255) ggCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGc < 1:2132574/148‑1 (MQ=255) ggCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGc < 1:3395990/148‑1 (MQ=255) gCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGcc > 1:841954/1‑148 (MQ=255) ggaggaGCCAAGCAGGTTAGAGCGCCAGACAAACAAATGACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCt < 2:1048597/148‑1 (MQ=255) gaggatCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGAATGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAACTTCTGTGGGGGATAATCCGGCCTTGTCGGCtt > 2:590515/1‑148 (MQ=255) aggagCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTc > 1:172020/1‑148 (MQ=255) ggagCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCTGCCTTGTCGGCTTCa > 2:813705/1‑148 (MQ=255) agCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGc < 1:3543393/148‑1 (MQ=255) gCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCt > 1:3056682/1‑148 (MQ=255) ccAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCtt > 2:1731070/1‑148 (MQ=255) ccAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCtt < 2:183891/148‑1 (MQ=255) aaGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTTCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTa < 2:2763702/148‑1 (MQ=255) gCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAAt < 1:1164719/148‑1 (MQ=255) gTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCg > 1:1268312/1‑148 (MQ=255) tAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAg > 2:3520773/1‑148 (MQ=255) tAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAg > 2:3520980/1‑148 (MQ=255) gagCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCg < 1:1615119/148‑1 (MQ=255) cgcCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGt < 1:3193947/148‑1 (MQ=255) cgcCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGt < 1:101548/148‑1 (MQ=255) cgcCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGt < 2:287387/148‑1 (MQ=255) | ATCGCTGCAGTTTGCCACTCGACTTCTTCCGGTTTGATCCCGTCGCTGGCACCGAGTTCCTCGCCCTGAATCCCGCTTTCGGTCCCCAGCAGATACTTCTGCATATACTCGTGGCCTTTGCCGGAGGAGCCAAGCAGGTTAGAGCGCCAGACAAACAAATTACGCGGATGATTGCTGCTGCTATCTGGTTGTTCGCAGGCCATACGTAAATCGCCCGATTTCAGCGCCTGGGCGGTAAATTCTGTGGGGGATAATCCGGCCTTGTCGGCTTCAGCTTTAATCCCGAGCGGGT > CP009273/1534566‑1534857 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |