Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,576,909 A→G 5.1% intergenic (‑128/+274) ydeN ← / ← ydeO putative Ser‑type periplasmic non‑aryl sulfatase/UV‑inducible global regulator, EvgA‑, GadE‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,576,9090AG 5.1% 871.6 / 28.2 274intergenic (‑128/+274)ydeN/ydeOputative Ser‑type periplasmic non‑aryl sulfatase/UV‑inducible global regulator, EvgA‑, GadE‑dependent
Reads supporting (aligned to +/- strand):  ref base A (126/134);  new base G (8/6);  total (134/140)
Fisher's exact test for biased strand distribution p-value = 5.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01

Only 100 of 282 total aligned reads displayed.

TTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAGGTTATGCAAGTGCATA  >  CP009273/1576762‑1577056
                                                                                                                                                   |                                                                                                                                                   
ttCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATa                                                                                                                                                     >  2:2161978/1‑148 (MQ=255)
ttCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATa                                                                                                                                                     >  2:757551/1‑148 (MQ=255)
    ttAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTAAGTCACATAATGAGATAGCAGATTTAGATAAAAAAACGGAAAAAAAAGTCCATAAAGc                                                                                                                                                 >  2:1994173/1‑148 (MQ=255)
       aTGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGtt                                                                                                                                              >  2:2881376/1‑148 (MQ=255)
            gACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACAt                                                                                                                                         <  2:1371927/148‑1 (MQ=255)
             aCTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACAtt                                                                                                                                        <  2:102923/148‑1 (MQ=255)
             aCTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACAtt                                                                                                                                        <  2:1901737/148‑1 (MQ=255)
             aCTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACAtt                                                                                                                                        >  1:3189315/1‑148 (MQ=255)
              cTTCATAAATTTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTa                                                                                                                                       <  1:3023579/148‑1 (MQ=255)
              cTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTa                                                                                                                                       <  2:2552416/148‑1 (MQ=255)
              cTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTa                                                                                                                                       <  2:1117531/148‑1 (MQ=255)
                 cATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACtt                                                                                                                                    <  1:3001979/148‑1 (MQ=255)
                   tAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTc                                                                                                                                  >  1:1715455/1‑148 (MQ=255)
                   tAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTc                                                                                                                                  <  2:2494862/148‑1 (MQ=255)
                    aaaTGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATGAAGCGTTGACATTACTTTCt                                                                                                                                 >  1:1242987/1‑148 (MQ=255)
                     aaTGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTg                                                                                                                                <  1:659313/148‑1 (MQ=255)
                                  ttATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTaa                                                                                                                   <  1:1931959/148‑1 (MQ=255)
                                   tATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAAt                                                                                                                  <  2:912045/148‑1 (MQ=255)
                                       gTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTtct                                                                                                              <  2:2247543/148‑1 (MQ=255)
                                        tACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTtctc                                                                                                             >  2:1482478/1‑148 (MQ=255)
                                                   aaaGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAaaca                                                                                                  >  2:1847570/1‑148 (MQ=255)
                                                   aaaGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAaaca                                                                                                  >  2:56729/1‑148 (MQ=255)
                                                    aaGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAaacaa                                                                                                 >  1:2747869/1‑148 (MQ=255)
                                                    aaGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAaacaa                                                                                                 >  1:2400654/1‑148 (MQ=255)
                                                     aGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAaacaac                                                                                                >  2:3125857/1‑148 (MQ=255)
                                                     aGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAaacaac                                                                                                >  1:1562069/1‑148 (MQ=255)
                                                       tAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTa                                                                                              <  2:2762313/148‑1 (MQ=255)
                                                       tAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTa                                                                                              <  2:1103513/148‑1 (MQ=255)
                                                        aaTTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTaa                                                                                             <  2:3026456/148‑1 (MQ=255)
                                                        aaTTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTaa                                                                                             <  2:1256410/148‑1 (MQ=255)
                                                          ttttACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTAGCCGATAAACAACTAAtt                                                                                           >  2:757749/1‑148 (MQ=255)
                                                           tttACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAAttt                                                                                          <  2:1811242/148‑1 (MQ=255)
                                                             tACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTAt                                                                                        <  1:3097440/148‑1 (MQ=255)
                                                             tACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTAt                                                                                        <  1:3172093/148‑1 (MQ=255)
                                                             tACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTAt                                                                                        >  2:2620254/1‑148 (MQ=255)
                                                             tACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTAt                                                                                        >  1:1390229/1‑148 (MQ=255)
                                                               cGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTg                                                                                      >  2:1763040/1‑148 (MQ=255)
                                                               cGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTg                                                                                      <  1:2514673/148‑1 (MQ=255)
                                                                 aaGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGat                                                                                    >  2:1412550/1‑148 (MQ=255)
                                                                 aaGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGat                                                                                    <  1:1140640/148‑1 (MQ=255)
                                                                  agatAAATAAGTGGATGTAAGTGAATTTATTCACTTAAAGAGATAGCAGATTTAGCTAAAAAAAGGGATAATACAGTCCATATAGCGTTGACATTACTTTCTTTTCTATTAAGTATTTTCTCGCCGATAAACAACTAATTTATTGata                                                                                   <  1:592379/148‑1 (MQ=255)
                                                                  agagAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGata                                                                                   <  1:2587018/148‑1 (MQ=255)
                                                                  agagAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGata                                                                                   >  1:2344034/1‑148 (MQ=255)
                                                                    agaAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATAtt                                                                                 >  2:3237770/1‑148 (MQ=255)
                                                                    agaAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATAtt                                                                                 >  2:3428087/1‑148 (MQ=255)
                                                                      aaaTAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTta                                                                               >  2:104546/1‑148 (MQ=255)
                                                                      aaaTAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTta                                                                               >  2:463431/1‑148 (MQ=255)
                                                                       aaTAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTtaa                                                                              <  1:2059250/148‑1 (MQ=255)
                                                                        aTAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTtaat                                                                             <  1:198168/148‑1 (MQ=255)
                                                                        aTAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTtaat                                                                             >  2:590237/1‑148 (MQ=255)
                                                                            gTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAat                                                                         >  2:3418609/1‑148 (MQ=255)
                                                                            gTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAat                                                                         <  2:719788/148‑1 (MQ=255)
                                                                               gATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAattat                                                                      <  2:3421965/148‑1 (MQ=255)
                                                                               gATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAattat                                                                      <  2:1545149/148‑1 (MQ=255)
                                                                               gATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAattat                                                                      <  2:3308023/148‑1 (MQ=255)
                                                                                 tGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTg                                                                    >  1:74931/1‑148 (MQ=255)
                                                                                  gTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGc                                                                   >  2:3493290/1‑148 (MQ=255)
                                                                                   tAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCa                                                                  <  2:373885/148‑1 (MQ=255)
                                                                                    aaGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCAt                                                                 >  2:1812267/1‑148 (MQ=255)
                                                                                      gTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCAttt                                                               >  1:1034744/1‑148 (MQ=255)
                                                                                       tGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCAtttt                                                              >  1:3314068/1‑148 (MQ=255)
                                                                                        gAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTa                                                             <  1:2831736/148‑1 (MQ=255)
                                                                                        gAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTa                                                             <  1:3430553/148‑1 (MQ=255)
                                                                                          aGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACt                                                           <  1:958283/148‑1 (MQ=255)
                                                                                            ttAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGTAAAACACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGa                                                         <  1:56732/148‑1 (MQ=255)
                                                                                             tAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATGAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGAc                                                        >  1:380429/1‑148 (MQ=255)
                                                                                             tAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATGAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGAc                                                        >  1:380460/1‑148 (MQ=255)
                                                                                              aGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACa                                                       >  1:2945424/1‑148 (MQ=255)
                                                                                               gTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACaa                                                      >  2:523794/1‑148 (MQ=255)
                                                                                                tCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACaaa                                                     <  2:2941663/148‑1 (MQ=255)
                                                                                                   caTAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATg                                                  <  1:481704/148‑1 (MQ=255)
                                                                                                    aTAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGc                                                 >  1:810231/1‑148 (MQ=255)
                                                                                                    aTAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGc                                                 >  1:284421/1‑148 (MQ=255)
                                                                                                        agagATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTTATATTTAATAAATTATTGCATTTTAATGAAAAAATgaagaa                                             >  1:1864055/1‑148 (MQ=255)
                                                                                                             tAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTgag                                        <  1:603913/148‑1 (MQ=255)
                                                                                                              aGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATGAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTgaga                                       >  2:863455/1‑148 (MQ=255)
                                                                                                                  gATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCat                                   <  1:2123725/148‑1 (MQ=255)
                                                                                                                   aTTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCata                                  >  1:3550376/1‑148 (MQ=255)
                                                                                                                    tttAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCataa                                 <  1:2256937/148‑1 (MQ=255)
                                                                                                                    tttAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCataa                                 <  1:467296/148‑1 (MQ=255)
                                                                                                                    tttAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCataa                                 <  1:907034/148‑1 (MQ=255)
                                                                                                                     ttAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAAATCataaa                                >  2:2476806/1‑148 (MQ=255)
                                                                                                                       aGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCataaata                              >  2:211568/1‑148 (MQ=255)
                                                                                                                        gCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCataaataa                             <  2:981938/148‑1 (MQ=255)
                                                                                                                          tAAAAAAAGTGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATc                           <  1:2881376/148‑1 (MQ=255)
                                                                                                                              aaaaGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGc                       >  2:388693/1‑148 (MQ=255)
                                                                                                                              aaaaGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGc                       >  2:2175597/1‑148 (MQ=255)
                                                                                                                                aaGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAAATCATAAATAATCATGCaa                     >  2:1173543/1‑148 (MQ=255)
                                                                                                                                 aGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAAc                    >  2:959303/1‑148 (MQ=255)
                                                                                                                                  gggAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACa                   <  1:261950/148‑1 (MQ=255)
                                                                                                                                   ggAAAAAACAGTCGATAATGCGTTGTCATTTCTTTCTGTTCTATTAATTAATTTCTCTCCTATAAACAACTAATTTATTGATATTTAATATATTATTGCATTTTACTGACATAATGCAGAATTGAGATCATAAATAATCATGCAACAg                  <  2:2316552/148‑1 (MQ=255)
                                                                                                                                   ggAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAg                  <  2:3437001/148‑1 (MQ=255)
                                                                                                                                    gAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAgg                 <  2:2400654/148‑1 (MQ=255)
                                                                                                                                      aaaaaCAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAGGtt               >  2:2686266/1‑148 (MQ=255)
                                                                                                                                       aaaaCAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAGGTTa              >  1:2196076/1‑148 (MQ=255)
                                                                                                                                         aaCAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAGGTTATg            >  2:539295/1‑148 (MQ=255)
                                                                                                                                           cAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAGGTTATGCa          <  2:3218861/148‑1 (MQ=255)
                                                                                                                                             gTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAGGTTATGCAAg        <  1:1826016/148‑1 (MQ=255)
                                                                                                                                                cATGAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAGGTTATGCAAGTGc     <  2:380443/148‑1 (MQ=255)
                                                                                                                                                   aaaGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAGGTTATGCAATTGCATa  >  2:2733055/1‑148 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
TTCTTTAATGCAGACTTCATAAATGTTCCTCTTCTTATTGTACTTAATTCCAAAGTAATTTTACGAAGAGAAATAAGTGGATGTAAGTGAAGTTAGTCACATAAAGAGATAGCAGATTTAGCTAAAAAAAGGGAAAAAACAGTCCATAAAGCGTTGACATTACTTTCTGTTCTATTAAGTAATTTCTCGCCGATAAACAACTAATTTATTGATATTTAATAAATTATTGCATTTTACTGACAAAATGCAGAATTGAGATCATAAATAATCATGCAACAGGTTATGCAAGTGCATA  >  CP009273/1576762‑1577056

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: