| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,621,733 | T→A | 9.0% | intergenic (‑96/‑41) | dcp ← / → ydfG | dipeptidyl carboxypeptidase II/NADP‑dependent 3‑hydroxy acid dehydrogenase; malonic semialdehyde reductase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,621,733 | 0 | T | A | 9.0% | 698.8 / 46.9 | 232 | intergenic (‑96/‑41) | dcp/ydfG | dipeptidyl carboxypeptidase II/NADP‑dependent 3‑hydroxy acid dehydrogenase; malonic semialdehyde reductase |
| Reads supporting (aligned to +/- strand): ref base T (104/107); new base A (11/10); total (115/117) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.23e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01 | |||||||||||
Only 100 of 233 total aligned reads displayed.
GAGCCAGATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAGGAAC > CP009273/1621586‑1621879 | aGCCAGATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTg < 2:848745/148‑1 (MQ=255) aGCCAGATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTg < 2:543318/148‑1 (MQ=255) gCCAGATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGc > 1:1117231/1‑148 (MQ=255) ccAGATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCt > 1:593020/1‑148 (MQ=255) ccAGATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCt > 1:2377700/1‑148 (MQ=255) ccAGATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGAGCt < 2:2724140/148‑1 (MQ=255) gATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATg < 1:2927879/148‑1 (MQ=255) gATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATg < 1:2464315/148‑1 (MQ=255) tACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGtt > 1:1186545/1‑148 (MQ=255) ggCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTAtt < 1:2529947/148‑1 (MQ=255) cAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGa > 1:48666/1‑148 (MQ=255) cAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGa > 1:1040642/1‑148 (MQ=255) gtgtGCTTTGCGCAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGaca < 2:2656556/148‑1 (MQ=255) gtgCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGacaca > 2:462360/1‑148 (MQ=255) gtgCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGacaca < 1:2637953/148‑1 (MQ=255) gCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGAcacaca > 1:1845147/1‑148 (MQ=255) gCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGAcacaca > 1:3277333/1‑148 (MQ=255) gCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGCAGTGCAATCTTGCAATCCAGTATTACAATCTCTTAAGCATCCCTTGCTATGTTATTGAcacaca > 1:665708/1‑148 (MQ=255) cTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACaa > 2:766856/1‑148 (MQ=255) ttGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACaaaa < 1:3073726/148‑1 (MQ=255) ttGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACaaaa < 1:1261867/148‑1 (MQ=255) tGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAg > 1:624316/1‑148 (MQ=255) tGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAg > 1:624521/1‑148 (MQ=255) acaAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGt < 2:1208396/148‑1 (MQ=255) caAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGtt > 2:1068092/1‑148 (MQ=255) ggaaaggaTTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAg > 2:2961888/1‑148 (MQ=255) gaaaggaTTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAgg < 2:1372414/148‑1 (MQ=255) gaTTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAg > 1:810876/1‑148 (MQ=255) gaTTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAg > 2:1705460/1‑148 (MQ=255) gaTTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAg > 2:2572074/1‑148 (MQ=255) ttCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTg > 1:3398519/1‑148 (MQ=255) ttCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTg > 2:1177048/1‑148 (MQ=255) ttCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTg > 2:155945/1‑148 (MQ=255) ttCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTg > 2:2457380/1‑148 (MQ=255) ttCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGAGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTg > 2:3372459/1‑148 (MQ=255) tCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTga < 2:727246/148‑1 (MQ=255) cATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTgag < 2:1843960/148‑1 (MQ=255) aTTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTgaga > 1:875536/1‑148 (MQ=255) tgttgtCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAgatg < 2:407607/148‑1 (MQ=255) tgttgtCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGGGAgatg > 1:279239/1‑148 (MQ=255) gttgtCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAgatga < 1:572173/148‑1 (MQ=255) ttgtCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAgatgat < 2:2376189/148‑1 (MQ=255) tCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGt < 2:3221326/148‑1 (MQ=255) cATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGAACGtt > 2:534598/1‑148 (MQ=255) tttCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTa > 2:522550/1‑148 (MQ=255) ccTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTgg > 2:1792354/1‑148 (MQ=255) ccTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTgg > 2:1616030/1‑148 (MQ=255) ccTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTgg < 1:2891368/148‑1 (MQ=255) cTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGa > 2:2817271/1‑148 (MQ=255) tGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAg > 2:1121179/1‑148 (MQ=255) gAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGc > 2:1123706/1‑148 (MQ=255) aCGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCaa > 2:621611/1‑148 (MQ=255) aCGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGAGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCaa < 2:2280548/148‑1 (MQ=255) cgcgAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAAc > 1:3342002/1‑148 (MQ=255) ggTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAg > 1:3035143/1‑148 (MQ=255) gtgtTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAgg > 2:47434/1‑148 (MQ=255) gtgtTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAgg > 2:48154/1‑148 (MQ=255) tgtTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGt < 2:386478/148‑1 (MQ=255) ttCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGttt < 2:315149/148‑1 (MQ=255) tCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGtttt < 1:3410195/148‑1 (MQ=255) ccATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGAGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTg < 1:507431/148‑1 (MQ=255) gCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGAAACTCATATGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGaa < 1:3545941/148‑1 (MQ=255) gTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGAGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATg < 2:1991457/148‑1 (MQ=255) tAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGc > 2:2821336/1‑148 (MQ=255) tAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGc < 1:1293377/148‑1 (MQ=255) tAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGc < 1:1255561/148‑1 (MQ=255) aGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCa < 2:1911579/148‑1 (MQ=255) ggCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCAt > 1:1923982/1‑148 (MQ=255) gCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCAtt > 1:124544/1‑148 (MQ=255) cTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTa > 1:3318190/1‑148 (MQ=255) ttACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTAc < 1:414868/148‑1 (MQ=255) ttACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTAc < 1:1454608/148‑1 (MQ=255) gATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACtcgtc > 1:2192429/1‑148 (MQ=255) ggAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTa < 2:3320965/148‑1 (MQ=255) gCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTcaa < 2:3298191/148‑1 (MQ=255) gCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGAGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTcaa > 1:2262853/1‑148 (MQ=255) cAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTcaac > 2:3446566/1‑148 (MQ=255) tCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTGACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAg < 2:2591858/148‑1 (MQ=255) tCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTGTTATTCAACAAg > 2:2780946/1‑148 (MQ=255) aTCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATaa < 1:1483612/148‑1 (MQ=255) ccAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAg < 1:2079859/148‑1 (MQ=255) cAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGt > 1:585324/1‑148 (MQ=255) cAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGt < 2:3234924/148‑1 (MQ=255) cAGTATTACCCGCTCTTAAGCATCCCGAGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTGAACAAGGGCATAAAGt > 1:1615126/1‑148 (MQ=255) cAGTATGACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGACTGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGt < 2:2031020/148‑1 (MQ=255) gTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTAAACAAGGGCATAAAGTTa > 1:1883985/1‑148 (MQ=255) tATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTAt > 2:745877/1‑148 (MQ=255) ttACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCg < 1:1616030/148‑1 (MQ=255) ttACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCg > 2:2744839/1‑148 (MQ=255) ttACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCg < 1:1792354/148‑1 (MQ=255) cccGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGTAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCa < 1:462360/148‑1 (MQ=255) cccGCTCTTAAGCATCCCGTGCTATGTTATTGACACAAAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCa < 2:665708/148‑1 (MQ=255) cATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGcc < 1:1705460/148‑1 (MQ=255) tCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCCTAAAGTTATCGCCACTGGCCGTCGCCAg > 1:3244498/1‑148 (MQ=255) cccGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAgg > 1:2441891/1‑148 (MQ=255) cccGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAgg > 1:2679127/1‑148 (MQ=255) cccGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAgg > 1:1498746/1‑148 (MQ=255) ccGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAGGa < 2:2066046/148‑1 (MQ=255) ccGAGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAGGa < 1:369588/148‑1 (MQ=255) cGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTAAACAAGGGCAGAAAGTTATAGCCACTGGCCGTCGCCAGGaa > 1:71943/1‑148 (MQ=255) | GAGCCAGATACGGCAGTGTGCTTTGCACAAGGAAAGGATTCATTGTTGTCATTTTCTTCTCCTGAACGCGAGGTGTTCCATAGCGTAGGCTTACTGATAACGGAGTGCAATCTTGCAATCCAGTATTACCCGCTCTTAAGCATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGATGATCGTTTTAGTAACTGGAGCAACGGCAGGTTTTGGTGAATGCATTACTCGTCGTTTTATTCAACAAGGGCATAAAGTTATCGCCACTGGCCGTCGCCAGGAAC > CP009273/1621586‑1621879 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |