Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 1,650,532 G→T 45.8% R31L (CGT→CTT)  speG → spermidine N1‑acetyltransferase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092731,650,5320GT45.8% 167.6 / 273.2 227R31L (CGT→CTT) speGspermidine N1‑acetyltransferase
Reads supporting (aligned to +/- strand):  ref base G (57/66);  new base T (58/46);  total (115/112)
Fisher's exact test for biased strand distribution p-value = 1.83e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 228 total aligned reads displayed.

GGCCGCGTTATTACCCCCTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCTGGTGGAAATTAACCATG  >  CP009273/1650386‑1650678
                                                                                                                                                  |                                                                                                                                                  
ggCCGCGTTATTACCCCCTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGt                                                                                                                                                   <  2:2131596/148‑1 (MQ=255)
 gCCGCGTTATTACCCCCTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGtt                                                                                                                                                  >  2:35587/1‑148 (MQ=255)
  ccGCGTTATTACCCCCTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTa                                                                                                                                                 <  1:301245/148‑1 (MQ=255)
     cgTTATTACCCCCTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTg                                                                                                                                              <  1:1312358/148‑1 (MQ=255)
      gTTATTACCCCCTAACCTGTTAGTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTgg                                                                                                                                             <  2:2190189/148‑1 (MQ=255)
           taCCCCCTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGa                                                                                                                                        >  1:3138821/1‑148 (MQ=255)
            aCCCCCTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAg                                                                                                                                       >  2:197726/1‑148 (MQ=255)
             cccccTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAgg                                                                                                                                      >  1:475356/1‑148 (MQ=255)
                ccTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAAc                                                                                                                                   >  2:3511655/1‑148 (MQ=255)
                 cTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAAcc                                                                                                                                  <  1:2161243/148‑1 (MQ=255)
                 cTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAAcc                                                                                                                                  <  2:489528/148‑1 (MQ=255)
                         ttATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAg                                                                                                                          <  2:1298279/148‑1 (MQ=255)
                           aTTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGcc                                                                                                                        <  1:1462110/148‑1 (MQ=255)
                            ttGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCt                                                                                                                       >  2:2529477/1‑148 (MQ=255)
                             tGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCtt                                                                                                                      >  1:828714/1‑148 (MQ=255)
                              gATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCttt                                                                                                                     <  1:2889043/148‑1 (MQ=255)
                               aTTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTttg                                                                                                                    <  2:1697845/148‑1 (MQ=255)
                                tttAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTttgt                                                                                                                   <  2:1304767/148‑1 (MQ=255)
                                ttgaaGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTttgt                                                                                                                   <  2:3074598/145‑1 (MQ=255)
                                 ttAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTttgtt                                                                                                                  <  2:2890334/148‑1 (MQ=255)
                                 ttAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTttgtt                                                                                                                  >  1:2457731/1‑148 (MQ=255)
                                     ggAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAAc                                                                                                              >  2:606480/1‑148 (MQ=255)
                                     ggAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAAc                                                                                                              >  1:2086818/1‑148 (MQ=255)
                                     ggAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAAc                                                                                                              >  1:1005379/1‑148 (MQ=255)
                                      gAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAAct                                                                                                             <  1:2619814/148‑1 (MQ=255)
                                        aTGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAActct                                                                                                           >  2:494805/1‑148 (MQ=255)
                                             aGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGAt                                                                                                      <  2:737506/148‑1 (MQ=255)
                                              ggACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATc                                                                                                     >  1:940278/1‑148 (MQ=255)
                                                acacGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTg                                                                                                   >  1:1421788/1‑148 (MQ=255)
                                                 cacGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGt                                                                                                  <  2:2485891/148‑1 (MQ=255)
                                                 cacGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGt                                                                                                  <  2:1820828/148‑1 (MQ=255)
                                                      tATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGAt                                                                                             >  2:3015494/1‑148 (MQ=255)
                                                      tATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGAt                                                                                             >  1:1724017/1‑148 (MQ=255)
                                                       aTGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATa                                                                                            <  2:3371835/148‑1 (MQ=255)
                                                       aTGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTAAGAAGCCTTTGTTGAACTCTCTGATCTGTATGATa                                                                                            <  2:796084/148‑1 (MQ=255)
                                                       aTGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATa                                                                                            >  1:1866806/1‑148 (MQ=255)
                                                         gCCAAGCGCCCAAAGTTTTAAGCTACGCCCGCTGGAGCGTTAAGATTTACGATATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAg                                                                                          <  1:739311/148‑1 (MQ=255)
                                                            aaGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCat                                                                                       <  2:1990949/148‑1 (MQ=255)
                                                            aaGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCat                                                                                       >  1:1430850/1‑148 (MQ=255)
                                                            aaGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTTAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAATCat                                                                                       >  1:2281241/1‑148 (MQ=255)
                                                            aaGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCat                                                                                       >  1:1606685/1‑148 (MQ=255)
                                                              gcgcCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCatat                                                                                     <  2:2626551/148‑1 (MQ=255)
                                                              gcgcCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCatat                                                                                     >  1:2589076/1‑148 (MQ=255)
                                                              gcgcCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCatat                                                                                     >  1:131466/1‑148 (MQ=255)
                                                              gcgcCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCatat                                                                                     <  1:2089894/148‑1 (MQ=255)
                                                                gcCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTc                                                                                   <  2:670603/148‑1 (MQ=255)
                                                                gcCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTc                                                                                   <  1:1402941/148‑1 (MQ=255)
                                                                 cccACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCa                                                                                  <  2:1229831/148‑1 (MQ=255)
                                                                  ccACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCAc                                                                                 >  2:2259834/1‑148 (MQ=255)
                                                                   cacaGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACg                                                                                <  2:819681/148‑1 (MQ=255)
                                                                    acaGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGa                                                                               <  1:2556393/148‑1 (MQ=255)
                                                                    acaGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGa                                                                               <  2:1024968/148‑1 (MQ=255)
                                                                    acaGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGa                                                                               <  2:2800337/148‑1 (MQ=255)
                                                                        tgtTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCag                                                                           >  1:2694506/1‑148 (MQ=255)
                                                                        tgtTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCag                                                                           >  1:326413/1‑148 (MQ=255)
                                                                        tgtTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCag                                                                           >  1:323170/1‑148 (MQ=255)
                                                                         gtTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCaga                                                                          >  2:657502/1‑148 (MQ=255)
                                                                          ttAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCagag                                                                         >  2:1094370/1‑148 (MQ=255)
                                                                          ttAAGCTACGCCCCCTGGAGCCTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCacag                                                                         >  2:1094358/1‑148 (MQ=255)
                                                                             aGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGa                                                                      <  2:2198125/148‑1 (MQ=255)
                                                                              gCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGaa                                                                     <  1:494805/148‑1 (MQ=255)
                                                                                 aCGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACgg                                                                  >  1:1980699/1‑148 (MQ=255)
                                                                                 aCGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACgg                                                                  >  2:379250/1‑148 (MQ=255)
                                                                                    cccGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGgcgc                                                               <  2:550730/148‑1 (MQ=255)
                                                                                          ggAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTtgtg                                                         >  1:1171040/1‑148 (MQ=255)
                                                                                          ggAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTtgtg                                                         >  1:2335827/1‑148 (MQ=255)
                                                                                           gAGCGTGAAGATTTACGCTATGTACCTCAACTCGACATTCACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATTATAAGCATATTCACGATCAGAGCGAACGGCGCTTTgtgg                                                        <  2:1633784/148‑1 (MQ=255)
                                                                                           gAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTgtgg                                                        >  1:802676/1‑148 (MQ=255)
                                                                                            aGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTgtggt                                                       >  2:1788274/1‑148 (MQ=255)
                                                                                             gCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTgtggtg                                                      >  2:1367397/1‑148 (MQ=255)
                                                                                                tGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGaa                                                   >  2:1124879/1‑148 (MQ=255)
                                                                                                 gAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAAt                                                  >  1:2121764/1‑148 (MQ=255)
                                                                                                   aGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAAtgt                                                >  1:519605/1‑148 (MQ=255)
                                                                                                     aTTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGa                                              <  2:1899975/148‑1 (MQ=255)
                                                                                                     aTTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGa                                              >  2:3231640/1‑148 (MQ=255)
                                                                                                       ttACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACg                                            <  1:2529477/148‑1 (MQ=255)
                                                                                                         aCGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGc                                          >  1:999068/1‑148 (MQ=255)
                                                                                                             tATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGaaa                                      >  1:3386687/1‑148 (MQ=255)
                                                                                                              aTGTACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGaaaa                                     <  1:3412961/148‑1 (MQ=255)
                                                                                                              aTGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGaaaa                                     <  2:16235/148‑1 (MQ=255)
                                                                                                                 tACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGc                                  >  1:2793618/1‑148 (MQ=255)
                                                                                                                 tACATCAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGc                                  >  1:2748839/1‑148 (MQ=255)
                                                                                                                  aCATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGcc                                 >  1:2416852/1‑148 (MQ=255)
                                                                                                                      cAACTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTc                             >  1:2890507/1‑148 (MQ=255)
                                                                                                                        aCTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCtg                           >  1:192654/1‑148 (MQ=255)
                                                                                                                         cTCGACAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCtgg                          >  1:1674690/1‑148 (MQ=255)
                                                                                                                              cAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCCCGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAg                     <  1:1994812/148‑1 (MQ=255)
                                                                                                                              cAATAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAg                     <  1:2779350/148‑1 (MQ=255)
                                                                                                                               aaTAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGc                    <  2:1430850/148‑1 (MQ=255)
                                                                                                                                 tAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCtg                  >  2:1420755/1‑148 (MQ=255)
                                                                                                                                 tAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCtg                  >  2:3359985/1‑148 (MQ=255)
                                                                                                                                 tAACGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGATTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCtg                  >  2:612041/1‑148 (MQ=255)
                                                                                                                                  aaCGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCtgg                 >  1:1529007/1‑148 (MQ=255)
                                                                                                                                  aaCGCCAGTGTGATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCtgg                 >  1:1101193/1‑148 (MQ=255)
                                                                                                                                    cGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCtggtg               >  2:3549260/1‑148 (MQ=255)
                                                                                                                                           gtgATGCTTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCTGGTGGAAATTa        <  2:2078592/148‑1 (MQ=255)
                                                                                                                                            tgATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCTGGTGGAAATTaa       <  1:2062736/148‑1 (MQ=255)
                                                                                                                                            tgATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCTGGTGGAAATTaa       <  2:2391464/148‑1 (MQ=255)
                                                                                                                                                gCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCTGGTGGAAATTAACCAt   >  1:3419946/1‑148 (MQ=255)
                                                                                                                                                 cGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCTGGTGGAAATTAACCATg  <  2:2231675/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
GGCCGCGTTATTACCCCCTAACCTGTTATTGATTTAAGGAATGTAAGGACACGTTATGCCAAGCGCCCACAGTGTTAAGCTACGCCCGCTGGAGCGTGAAGATTTACGCTATGTACATCAACTCGACAATAACGCCAGTGTGATGCGTTACTGGTTTGAGGAACCCTACGAAGCCTTTGTTGAACTCTCTGATCTGTATGATAAGCATATTCACGATCAGAGCGAACGGCGCTTTGTGGTGGAATGTGACGGCGAAAAAGCCGGTCTGGTGGAGCTGGTGGAAATTAACCATG  >  CP009273/1650386‑1650678

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: