| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,790,259 | T→A | 5.2% | Q648L (CAA→CTA) | pheT ← | phenylalanine tRNA synthetase, beta subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,790,259 | 0 | T | A | 5.2% | 725.9 / 22.9 | 230 | Q648L (CAA→CTA) | pheT | phenylalanine tRNA synthetase, beta subunit |
| Reads supporting (aligned to +/- strand): ref base T (98/120); new base A (5/7); total (103/127) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.70e-01 | |||||||||||
Only 100 of 236 total aligned reads displayed.
CCTGAGGCACCACGCGGTCTGCGAGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGT > CP009273/1790113‑1790406 | ccTGAGGCACCACGCGGTCTGCGAGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTg < 2:658086/148‑1 (MQ=255) tGAGGCACCACGCGGTCTGCGAGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGcc < 2:722242/148‑1 (MQ=255) caccacGCGGTCTGCGAGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGa < 1:3469562/148‑1 (MQ=255) cgcgGTCTGCGAGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAg > 2:2008698/1‑148 (MQ=255) gcgGTCTGCGAGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGt < 2:1374478/148‑1 (MQ=255) cgGTCTGCGAGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTg > 2:1814219/1‑148 (MQ=255) gCGAGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCCACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGAt < 1:1133505/148‑1 (MQ=255) gCGAGCTTGTTCCACTCCAGTTAGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGAt < 2:3472457/148‑1 (MQ=255) aGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCg > 2:950634/1‑148 (MQ=255) ttGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCtt < 1:320920/148‑1 (MQ=255) ttGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCtt < 1:2071943/148‑1 (MQ=255) ttGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCtt > 1:1301822/1‑148 (MQ=255) tGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTc > 2:935892/1‑148 (MQ=255) tGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTc < 1:2836807/148‑1 (MQ=255) tCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGc > 2:1229594/1‑148 (MQ=255) cTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACgg > 1:2304813/1‑148 (MQ=255) ccAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCACCAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGaa < 2:859564/148‑1 (MQ=255) cAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAAc < 1:1081832/148‑1 (MQ=255) aGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACt > 1:1001350/1‑148 (MQ=255) tCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCaa > 2:76761/1‑148 (MQ=255) cGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAAc < 1:939697/148‑1 (MQ=255) aaCACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCt > 1:225876/1‑148 (MQ=255) acacCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAACACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTc < 1:2469668/148‑1 (MQ=255) acacCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTc > 1:874032/1‑148 (MQ=255) cacCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCa > 2:150597/1‑148 (MQ=255) cacCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCa > 2:2921734/1‑148 (MQ=255) ccAGAGTGAGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCAtt < 2:3342170/148‑1 (MQ=255) gACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTAcc > 2:436624/1‑148 (MQ=255) aCCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCg > 1:1752655/1‑148 (MQ=255) cGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAACTCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGt < 1:1240544/148‑1 (MQ=255) cGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCTGTTTACCGGt < 1:1758388/148‑1 (MQ=255) tAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAg > 2:2407483/1‑148 (MQ=255) tAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAg > 1:799343/1‑148 (MQ=255) tAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAg > 1:558806/1‑148 (MQ=255) tAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAg > 2:1044724/1‑148 (MQ=255) aGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCAGTCAGTTTACCGGTCAGGt > 2:2820189/1‑148 (MQ=255) aTCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCg < 1:3350486/148‑1 (MQ=255) tCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCga < 2:733964/148‑1 (MQ=255) gTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCACTACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAAc < 2:2251365/148‑1 (MQ=255) ttACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACgg > 1:1430116/1‑148 (MQ=255) tACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGa < 2:281042/148‑1 (MQ=255) tACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGa < 2:1699566/148‑1 (MQ=255) tACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGa < 2:1573315/148‑1 (MQ=255) aCGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGAt < 2:2518465/148‑1 (MQ=255) aCGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGAt < 2:2054529/148‑1 (MQ=255) ccAGTTCAGGATGAACAACCCCAACAAAACCACTACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCAATGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACTGATTCAAg < 2:2995289/148‑1 (MQ=255) aGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGAt > 2:2394142/1‑148 (MQ=255) aGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGAt > 1:478623/1‑148 (MQ=255) ttCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCg > 1:226531/1‑148 (MQ=255) tCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGc > 2:1870332/1‑148 (MQ=255) gAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCaa > 1:3147161/1‑148 (MQ=255) gAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCaa < 2:1896722/148‑1 (MQ=255) gAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCaa < 2:1441201/148‑1 (MQ=255) aacaacCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCaaa < 2:813310/148‑1 (MQ=255) acaacCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGTATTGCGCCGGATGCAGTGCCGGATTAGATTCTGCACTGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAAt < 1:2653545/148‑1 (MQ=255) ccAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGa > 1:1265028/1‑148 (MQ=255) caacaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGaa < 2:2782718/148‑1 (MQ=255) caacaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGaa < 1:1930607/148‑1 (MQ=255) aacaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGaaa < 1:2839096/148‑1 (MQ=255) aacaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGaaa < 2:485959/148‑1 (MQ=255) aacaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGaaa < 2:2273587/148‑1 (MQ=255) aacaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATAGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGaaa < 1:2373246/148‑1 (MQ=255) acaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAAt < 1:1560661/148‑1 (MQ=255) acaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAAt < 1:1560689/148‑1 (MQ=255) acaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAAt > 1:1037140/1‑148 (MQ=255) acaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAAt < 1:2407483/148‑1 (MQ=255) acaaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAAt > 1:1037229/1‑148 (MQ=255) caaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATc > 1:2415954/1‑148 (MQ=255) caaAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATc > 2:1075215/1‑148 (MQ=255) aacaCCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCa < 2:2582870/145‑1 (MQ=255) aaaCCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCaa < 1:1386738/148‑1 (MQ=255) aaaCCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCaa > 1:770410/1‑148 (MQ=255) aCCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACg < 2:128475/148‑1 (MQ=255) ccAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACgg > 1:2674740/1‑148 (MQ=255) cAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGt < 1:3671/148‑1 (MQ=255) cAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGt < 2:3312668/148‑1 (MQ=255) aaTACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGtc > 1:605612/1‑148 (MQ=255) aTACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGtct < 2:2174206/148‑1 (MQ=255) tACGTTCACCTTTCAGATAAATCGCTGCGGATTGTCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGtctc < 2:1872925/148‑1 (MQ=255) aCGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTctct > 2:3423637/1‑148 (MQ=255) gTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCttt < 1:2933362/148‑1 (MQ=255) gTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCttt < 2:3347742/148‑1 (MQ=255) gTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCttt < 1:1417845/148‑1 (MQ=255) cACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGc < 2:1732255/148‑1 (MQ=255) ccTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCa > 1:2970620/1‑148 (MQ=255) ccTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCa > 2:2693705/1‑148 (MQ=255) ttCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGt < 2:1436128/148‑1 (MQ=255) ttCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGt < 2:3520846/148‑1 (MQ=255) gATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCa < 2:1097112/148‑1 (MQ=255) gATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCa < 2:1516010/148‑1 (MQ=255) tAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGt > 1:3158111/1‑148 (MQ=255) tAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGt > 1:2342109/1‑148 (MQ=255) aaaTCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTg > 2:3540887/1‑148 (MQ=255) aaaTCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTg < 2:2291796/148‑1 (MQ=255) aaTCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGc > 1:381541/1‑148 (MQ=255) cGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGctct < 1:2795148/148‑1 (MQ=255) gCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGt > 1:2113756/1‑148 (MQ=255) gCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGt > 1:474467/1‑148 (MQ=255) cGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGGGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCGTTTGCCAGGGTCCAGTGCTCTTCGtc > 1:1176056/1‑147 (MQ=255) tGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGt < 1:1884220/148‑1 (MQ=255) | CCTGAGGCACCACGCGGTCTGCGAGCTTGTTCCACTCCAGTTCGAACACCAGAGTGCGACCGTTAAGATCCAGTTTACGTTCCAGTTCAGGATGAACAACCCCAACAAAACCAATACGTTCACCTTTCAGATAAATCGCTGCGGATTGCCCCGGATGCAGTGCCGGATTCGCTTCTGCACGGAACTCAACCTCATTCAGTTTACCGGTCAGGTCGAGAACGGATTCAAGATCGCCTTTCAAATCATAGAAATCAACGGTCTCTTTTGCCAGGTTCCAGTGCTCTTCGTAACGGT > CP009273/1790113‑1790406 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |