| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,338,233 | A→C | 7.7% | intergenic (‑585/‑111) | yfaL ← / → nrdA | adhesin/ribonucleoside‑diphosphate reductase 1, alpha subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,338,233 | 0 | A | C | 7.7% | 601.5 / 42.1 | 221 | intergenic (‑585/‑111) | yfaL/nrdA | adhesin/ribonucleoside‑diphosphate reductase 1, alpha subunit |
| Reads supporting (aligned to +/- strand): ref base A (102/101); new base C (6/11); total (109/112) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.14e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.27e-01 | |||||||||||
Only 100 of 222 total aligned reads displayed.
GAACAGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGACGGT > CP009273/2338086‑2338379 | gAACAGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCa > 1:658063/1‑148 (MQ=255) aCAGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGt > 1:434371/1‑148 (MQ=255) cAGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTg > 1:988674/1‑148 (MQ=255) ttATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAAt < 1:507587/148‑1 (MQ=255) tATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATc < 1:2221728/148‑1 (MQ=255) tATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATc < 1:3452633/148‑1 (MQ=255) aaCAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACa > 1:488660/1‑148 (MQ=255) aCAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACAt > 2:1241017/1‑148 (MQ=255) aCAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACAt < 1:1826050/148‑1 (MQ=255) aaaTTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCTGTGAATCCCAAACATAc > 1:2483352/1‑148 (MQ=255) aaTTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAATTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATAcc > 2:1775735/1‑148 (MQ=255) tttttCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATAcccc > 1:1329810/1‑148 (MQ=255) ttttCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATAccccc > 1:1490734/1‑148 (MQ=255) ttttCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATAccccc < 1:2310602/148‑1 (MQ=255) ttttCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATAccccc > 1:844183/1‑148 (MQ=255) tctcTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCtat > 2:1312628/1‑148 (MQ=255) tctcTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCtat < 1:2981155/148‑1 (MQ=255) tctTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCtatat > 2:1278479/1‑148 (MQ=255) tctTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCtatat < 2:2659798/148‑1 (MQ=255) ctTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCtatata < 1:14489/148‑1 (MQ=255) tCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCtatatata > 2:719511/1‑148 (MQ=255) tCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCCGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCtatatata > 1:734376/1‑148 (MQ=255) ccATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTACTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAgt < 2:1844552/148‑1 (MQ=255) cATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAgtg > 1:2373453/1‑148 (MQ=255) ttGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGtt > 1:710801/1‑148 (MQ=255) ttGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGtt > 2:3496517/1‑148 (MQ=255) ttGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGtt > 2:3496662/1‑148 (MQ=255) aCTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTa > 2:3488934/1‑148 (MQ=255) aCTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTACAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTa > 2:151858/1‑148 (MQ=255) cTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTaa > 1:891731/1‑148 (MQ=255) cTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTaa < 2:3051933/148‑1 (MQ=255) tCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAagca < 2:45892/148‑1 (MQ=255) cccGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAagcag < 1:1253335/148‑1 (MQ=255) ccGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAagcagc < 2:1700995/148‑1 (MQ=255) ccGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAagcagc < 2:1827801/148‑1 (MQ=255) ccGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAagcagc < 2:1827673/148‑1 (MQ=255) ggACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCtt > 1:2603934/1‑148 (MQ=255) ggACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCtt < 2:2845507/148‑1 (MQ=255) gACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCGTc < 2:2502088/148‑1 (MQ=255) ccTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGt < 2:1733490/148‑1 (MQ=255) cTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGta < 1:1928161/148‑1 (MQ=255) cTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACa < 1:2645308/148‑1 (MQ=255) ccTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTa > 2:2461890/1‑148 (MQ=255) ccTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTa < 2:2287242/148‑1 (MQ=255) cTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAg > 1:79559/1‑148 (MQ=255) cTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAg > 2:254581/1‑148 (MQ=255) tAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCANACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGt < 1:1803480/148‑1 (MQ=255) tAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGt < 1:3285668/148‑1 (MQ=255) aGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCt > 2:2380116/1‑148 (MQ=255) aGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCt > 2:75707/1‑148 (MQ=255) gTGCGCGAAAGCCTCTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGc < 1:3133649/148‑1 (MQ=255) tGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCa > 1:2431904/1‑148 (MQ=255) gcgcGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCAt > 1:1287548/1‑148 (MQ=255) cgcgAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATg < 1:1225062/148‑1 (MQ=255) cgcgAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATg < 1:39107/148‑1 (MQ=255) aaGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACt < 1:2087371/148‑1 (MQ=255) cACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTg > 2:2249428/1‑148 (MQ=255) tttttCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCgg > 2:1941845/1‑148 (MQ=255) tttCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGaa < 2:2050414/148‑1 (MQ=255) tttCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGaa < 2:3481095/148‑1 (MQ=255) tttCCTTCCTGAGTTATCCACAAAGATATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTTAATCCCAAACATACCCCCTATATATAGTGTTCTAATCAGCTTCCCGTACTACAGTTAGTCTGCATGAAACTATTCCGGaa > 1:2344618/1‑148 (MQ=255) tccttcctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAg < 2:2983203/148‑1 (MQ=255) ccttcctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGa > 2:2627898/1‑148 (MQ=255) ctGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTcc > 2:391719/1‑148 (MQ=255) tGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCa < 2:434371/148‑1 (MQ=255) aGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCaaa > 2:3105991/1‑148 (MQ=255) aGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCaaa > 1:1038128/1‑148 (MQ=255) ttATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCaaaaa < 1:2758973/148‑1 (MQ=255) ttATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCaaaaa > 2:3170480/1‑148 (MQ=255) ccACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAgg > 2:3249724/1‑148 (MQ=255) cacaAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGt < 2:2710123/148‑1 (MQ=255) aaGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGa > 2:1677413/1‑148 (MQ=255) aaGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGa > 2:1262072/1‑148 (MQ=255) aaGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGa > 2:2261573/1‑148 (MQ=255) aGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGac > 1:1594932/1‑148 (MQ=255) aGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGac > 2:572421/1‑148 (MQ=255) aGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGac > 1:37023/1‑148 (MQ=255) gTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGaca < 1:494245/148‑1 (MQ=255) ttATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGacat < 1:1685588/148‑1 (MQ=255) aTGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGacatac < 2:1376326/148‑1 (MQ=255) aTGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCCGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGacatac < 2:1376343/148‑1 (MQ=255) gCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGacatacat > 1:3208589/1‑148 (MQ=255) cgtGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGaa < 2:2275849/146‑1 (MQ=255) ttGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAAt < 2:598864/148‑1 (MQ=255) ttGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAAt < 2:662183/148‑1 (MQ=255) gagGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAAt > 1:3509575/1‑148 (MQ=255) gagGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAAt < 2:134916/148‑1 (MQ=255) ggTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATctg < 1:2440319/148‑1 (MQ=255) tCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATctgct < 2:2757919/148‑1 (MQ=255) cATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATctgctg > 1:2643382/1‑148 (MQ=255) acacTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACaa < 2:3398974/148‑1 (MQ=255) cacTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACaaa < 1:2627873/148‑1 (MQ=255) cacTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACaaa > 1:1391350/1‑148 (MQ=255) cTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATc > 1:1268419/1‑133 (MQ=255) cTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAgc > 1:275023/1‑148 (MQ=255) tATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAgcg > 1:3030139/1‑148 (MQ=255) aTCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAgcgc > 2:578798/1‑148 (MQ=255) tCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGcgcg < 2:2624186/148‑1 (MQ=255) tCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGcgcg < 2:844183/148‑1 (MQ=255) tGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGACg > 2:3308266/1‑148 (MQ=255) | GAACAGTTATTTTTAACAAATTTTTCTCTTCCCATTGACTTTCCCGGACACCTTGTCTGACCTAAGGTGCGCGAAAGCCACTTTTTCCTTCCTGAGTTATCCACAAAGTTATGCACTTGCAAGAGGGTCATTTTCACACTATCTTGCAGTGAATCCCAAACATACCCCCTATATATAGTGTTCTAAGCAGCTTCCCGTACTACAGGTAGTCTGCATGAAACTATTGCGGAAAGAATTCCAAAAACAGGTACGACATACATGAATCAGAATCTGCTGGTGACAAAGCGCGACGGT > CP009273/2338086‑2338379 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |