Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,463,906 C→A 23.1% Q433K (CAA→AAA)  gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,463,9060CA23.1% 348.5 / 14.7 150Q433K (CAA→AAA) gtrSserotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
Reads supporting (aligned to +/- strand):  ref base C (28/79);  new base A (37/4);  total (67/83)
Fisher's exact test for biased strand distribution p-value = 7.36e-13
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 152 total aligned reads displayed.

AGTATCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATG  >  CP009273/2463761‑2464053
                                                                                                                                                  |                                                                                                                                                   
agtaTCTCTTTTTGGAATATCTCAATTTTATTTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCaa                                                                                                                                                   <  2:1528387/148‑1 (MQ=255)
agtaTCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCaa                                                                                                                                                   <  1:2205650/148‑1 (MQ=255)
    tctcTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGaa                                                                                                                                               <  1:2890514/148‑1 (MQ=255)
    tctcTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGaa                                                                                                                                               <  2:1043928/148‑1 (MQ=255)
    tctcTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAATaa                                                                                                                                               >  2:1198353/1‑148 (MQ=255)
    tctcTTTTGGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGaa                                                                                                                                               <  2:1044016/148‑1 (MQ=255)
     ctctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGaaa                                                                                                                                              <  1:1444325/148‑1 (MQ=255)
     ctctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAGaaa                                                                                                                                              >  2:3433237/1‑148 (MQ=255)
        tttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCa                                                                                                                                           <  1:683526/148‑1 (MQ=255)
          tttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAg                                                                                                                                         <  1:1295118/148‑1 (MQ=255)
          tttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAAtaaataaat                                                                                                                                         >  2:592068/1‑147 (MQ=255)
              gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACaa                                                                                                                                     <  2:1726513/148‑1 (MQ=255)
              gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACaa                                                                                                                                     <  2:1726440/148‑1 (MQ=255)
              gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAACAAAACAAGaaaa                                                                                                                                     >  2:1901402/1‑148 (MQ=255)
               aaTATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAt                                                                                                                                    <  2:113712/148‑1 (MQ=255)
                atatCTCTTTTTTATGTGTCATTTTTCTGTGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTGATAAAATAATTCAAAGAAATCAAGACAATa                                                                                                                                   <  1:1591645/148‑1 (MQ=255)
                atatCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATa                                                                                                                                   <  1:1590801/148‑1 (MQ=255)
                          tttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTTTAAAATAATTAAAAGAAAAAAAAACAAAATCGAGTTaaa                                                                                                                         >  1:1202592/1‑148 (MQ=255)
                             aTGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCa                                                                                                                      <  1:327932/148‑1 (MQ=255)
                             aTGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTATAAAATAATTAAAAGAAATAAATAAAAAAGAGATGTaaataa                                                                                                                      >  2:2884546/1‑145 (MQ=255)
                             aTGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTAATTTATAAAATAAATCAAACAAATACAAACACAAGCGATGGAAAGcc                                                                                                                      >  2:2572538/1‑147 (MQ=255)
                             aTGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTGTTTTATTTTTTAAAAAAATAAAAAAAAAAAAAAAAAAATCGATGTaaatga                                                                                                                      >  1:422546/1‑145 (MQ=255)
                              tgtgTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAATAATTCAAATAAATAAATAAAAAAGCGATGTtaataaa                                                                                                                     >  2:2549517/1‑144 (MQ=255)
                                tgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTTATTTTTTAAAATAATAAAAAAAATAAAAACAAAATCGGTTTAAAggaact                                                                                                                   >  1:1774256/1‑143 (MQ=255)
                                  tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAg                                                                                                                 <  2:1402445/148‑1 (MQ=255)
                                   cATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGt                                                                                                                <  1:1031067/148‑1 (MQ=255)
                                       tttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTaa                                                                                                            <  2:876040/148‑1 (MQ=255)
                                         tCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAAt                                                                                                          <  2:404289/148‑1 (MQ=255)
                                            gggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTAATTATAAAATAAATCAAAGAAAAAAAGACAAAATCGCTGTATAGAACAAAGTTTTAAtttc                                                                                                       >  2:1868108/1‑146 (MQ=255)
                                             ggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcg                                                                                                      <  1:348100/148‑1 (MQ=255)
                                             ggAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcg                                                                                                      <  1:847116/148‑1 (MQ=255)
                                              gAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAAGAAAAAAAAACAAAAACGATGTAAAACACAAAGTTTAAAtttggc                                                                                                     >  2:633769/1‑144 (MQ=255)
                                              gAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTTATTTATAAAAAAATTAAAAGAAAACAACAAAAAAGCGATGTAAATCACAAAGATTaaaattggc                                                                                                     >  2:633675/1‑142 (MQ=255)
                                               aaGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgcg                                                                                                    <  2:2382212/148‑1 (MQ=255)
                                                aGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAATATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgcgc                                                                                                   <  2:2216097/148‑1 (MQ=255)
                                                aGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgcgc                                                                                                   <  2:753848/148‑1 (MQ=255)
                                                aGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTgcgcgc                                                                                                   <  2:2284022/148‑1 (MQ=255)
                                                 ggATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTTTAAAAAAAAAAAAATAAAAAAAAAAAATAAACAATTAAATCACAAAGTTTAAAtttaacgcc                                                                                                  >  2:3348146/1‑141 (MQ=255)
                                                 ggATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTAAAAAATAAATAAAAAAAAACAATACAAAAGCGATGTAAAGAAAAAAATTTAAAATTGGCGcc                                                                                                  >  2:2046456/1‑148 (MQ=255)
                                                   atatAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCaa                                                                                                <  1:2871583/148‑1 (MQ=255)
                                                    tataGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAAt                                                                                               <  2:2959605/148‑1 (MQ=255)
                                                    tataGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTTATTTATAAAATAAATAAAAAAAATAAAAAAAAAAACGAATTAAATCCGAAAGTTTTAATTTAGCGcccca                                                                                               >  1:3466951/1‑145 (MQ=255)
                                                     ataGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATc                                                                                              <  1:2861493/148‑1 (MQ=255)
                                                      taGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAATAAATAAAAAAAAAAAAAACAAAATCGAATTAAATAACAAATTTTAAAATTAGCGCCaaaaa                                                                                             >  2:2478695/1‑145 (MQ=255)
                                                        gagaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATg                                                                                           <  2:2691227/148‑1 (MQ=255)
                                                           aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgcg                                                                                        <  1:1869641/148‑1 (MQ=255)
                                                           aTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgcg                                                                                        <  1:1639842/148‑1 (MQ=255)
                                                             ttAAGCATGCATTTTTTTGGATTGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAATAAATCAAGACAATAGCGATGTAAAGCAATAAGTTTAAATTGCGCGCCAATCATGgcgcg                                                                                      <  2:508519/148‑1 (MQ=255)
                                                              tAAGCAAGAATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgcgcgc                                                                                     <  1:1109562/148‑1 (MQ=255)
                                                                 gcaagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGcaca                                                                                  <  1:192070/148‑1 (MQ=255)
                                                                        tttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAAATAAAAAAAAACAATAAAAAAACGAAGTAAATCAAGAAGTTTAAATTTCGCGCCAAACAAGGCGCCCaaaaaccaaa                                                                           >  2:2248988/1‑142 (MQ=255)
                                                                         ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTTTAAAAAAAATAAAATAAATAAAAAAAAAATAGATGTAAAACAAAAAGTTTAAATTTAGCGCCCAACAAGGCGCGCCCaaaagataa                                                                          >  1:556656/1‑141 (MQ=255)
                                                                         ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTTAAAAAAATAAATAAAAAATCGATTTAAATCAATAATTTTATATTGTGGGGCAAGAAAGGCGGGCACAAGATataa                                                                          >  2:2543671/1‑148 (MQ=255)
                                                                         ttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAATAAATAAAGACAAAATCGATGTAAAGCAAAAAGTTTAAATTGCGCGCCAATAATTGCGCGCACAATCTataa                                                                          >  2:2972571/1‑148 (MQ=255)
                                                                            tttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTTATTTAAAAAAAAATTAAAAAAAAAAAAAACAAAAAAGATGTTAAGCAATAAGTTTAAATTTCGCGCCCAACAAGGCGCGCACAAACAaaaataa                                                                       >  1:1786146/1‑147 (MQ=255)
                                                                              tGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCa                                                                     <  2:591791/148‑1 (MQ=255)
                                                                              tGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCa                                                                     <  2:3531431/148‑1 (MQ=255)
                                                                                 aaTGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAAcc                                                                  <  1:855030/148‑1 (MQ=255)
                                                                                  aTGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTAAAAGAAAAAAAGACAATAACGATGTAAATCACAAAGTTTAAATTTCGCGCCCATAATGGCGCGCACAAACCATAATAACAAcca                                                                 >  2:215290/1‑147 (MQ=255)
                                                                                   tGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTa                                                                <  2:2271022/148‑1 (MQ=255)
                                                                                    ttATTTTTCTTTCGACCTTTGATTATACATAACTGTCGTTTTTTTAATTTATAAAATAATTCAAATAAATCAAGAAAATAGCGATTTAAAGCACTAAGTTTAAATTGCGCGCCAATCTTGGCGCGCACAAGCTATAATACCAACCTaa                                                               <  1:3340065/147‑1 (MQ=255)
                                                                                    gTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTaa                                                               <  1:2659782/148‑1 (MQ=255)
                                                                                    gTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAAAAATTCAAAGAAAAAAAAACAAAAACGATGTAAAGCACGAAGTTTAAAATTAACGCCAATCAAGTCGCCCACAACCAATAATACCAACCaaa                                                               >  2:294956/1‑148 (MQ=255)
                                                                                     tATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAAATAAAATAAATAAATAAAATATCGATTTAAATCAAAAAGTTTAAATTTAGCGCCAAACATGGCGCGCACAAGCTATAAAaacaacaaaaa                                                              >  2:2839680/1‑143 (MQ=255)
                                                                                         tttCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATAAAAAAAATAAAAAAAAAAAAAAAAAAAAAGATGTAAAGAACTAAGTTTTAATTTTGGGCCAAACATGGCGCGCCCCACCAATAAAAACAACAGAAtttga                                                          >  2:734689/1‑146 (MQ=255)
                                                                                          ttcgttcgACCTTTGATTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTtctc                                                         <  2:756376/148‑1 (MQ=255)
                                                                                           tcgttcgACCTTTGCTTATACATAACAGTCGTTTTTTTTATTTATTAAAAAATTAAAAGAAAAAAATAACAAAGCGATGTAAATCACGAAATTTAAATTTCGCGCCAAACATGTCGCGCCCAAGCTAAAAAAACAACCTAAtttatac                                                        >  2:2169913/1‑144 (MQ=255)
                                                                                           tcgttcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcc                                                        <  1:592068/148‑1 (MQ=255)
                                                                                              ttcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTAAAAAAAATAAAGAAAAAAGCGATGTAAAACACTAAGTTTAAAATTCGCGCCAAACAAAGCGCGCCCAACCAATAAAAACAACCAAAATTatcctac                                                     >  2:1094379/1‑146 (MQ=255)
                                                                                               tcgACCTTTGCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctcct                                                    <  1:2189402/148‑1 (MQ=255)
                                                                                               tcgACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctcct                                                    <  2:1200757/148‑1 (MQ=255)
                                                                                                 gACCTTTGCTTATACATAACAGTCGTTTTTTTAAATTATAAAATAAATAAAATAAAAAAAGAAAAAAGCCATTTAAATCACAAATTTTAAATTTCGCGCCAATCATGGCGCCCACAAGCTATAATAACAACCGAATTTatccaacgca                                                  >  2:514074/1‑142 (MQ=255)
                                                                                                   ccTTTGCTTATACATAACTGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATAAAGACAATAGCGATGTAAAGCACTATGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTa                                                <  1:3334765/148‑1 (MQ=255)
                                                                                                     tttGCTTATACATAACAGTCGTGTTTTTAATTTAAAAAATAAATGAAAGAAATAAAGACAAAAACGATTTAAAGCACAAAATTTAAATTTCGCGCCCATAATTGCGCGCCCAACCTATAAAAACAACCAAAATTATCCTACTCTAaga                                              >  2:851306/1‑148 (MQ=255)
                                                                                                      ttGCTTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTagag                                             <  2:1327935/148‑1 (MQ=255)
                                                                                                      ttGATTATACATAACAGTCTTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTagag                                             <  2:3095270/148‑1 (MQ=255)
                                                                                                              aaaTAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACtata                                     <  2:3297352/146‑1 (MQ=255)
                                                                                                                   aCAGTCTTTTTTTTAATTTATAAAATAATTCAAATAAATAAAGACAATAGCGATTTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                <  1:2478695/148‑1 (MQ=255)
                                                                                                                   aCAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                <  2:3218071/148‑1 (MQ=255)
                                                                                                                      gTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGa                             <  1:740060/148‑1 (MQ=255)
                                                                                                                       tCGTTTTTTTAATTTATAAAATAATTAAAAGAAATCAAGACAATATCGATGTAAAGCACTAAGTTTAAATTTCGCGCCAATAATGGCGCGCACAAGCTATAATACCAACCAAATTTCTCCTCCTCTTAGAGTGACTATATAACCTGAt                            >  2:2042665/1‑148 (MQ=255)
                                                                                                                            ttttttAATTTATAAAATAATTCAAAGAAATCAATACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCCATCATGGCGCGCACAAGCTATAATACCACCCTAATTTCTCGTCCTCTTAGAGTGACTATGTCTCGTGATAGaa                        >  2:267416/1‑148 (MQ=255)
                                                                                                                               tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTg                     >  2:2089031/1‑148 (MQ=255)
                                                                                                                                 tAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                   <  1:259007/148‑1 (MQ=255)
                                                                                                                                 tAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                   >  1:556636/1‑148 (MQ=255)
                                                                                                                                     ttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAt               >  1:354316/1‑148 (MQ=255)
                                                                                                                                     ttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAt               >  1:1736158/1‑148 (MQ=255)
                                                                                                                                       ataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTg             >  1:3206731/1‑148 (MQ=255)
                                                                                                                                        taAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAATTTTAAATGGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGa            <  1:1384199/148‑1 (MQ=255)
                                                                                                                                        taAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGa            >  2:992165/1‑148 (MQ=255)
                                                                                                                                         aaaaTAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGAc           >  1:2479135/1‑148 (MQ=255)
                                                                                                                                           aataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGTATTGCGGTATTGACTa         >  2:2097979/1‑148 (MQ=255)
                                                                                                                                           aataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTa         <  2:3114916/148‑1 (MQ=255)
                                                                                                                                            ataatTCAAATATATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTAt        <  1:2549517/148‑1 (MQ=255)
                                                                                                                                            ataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTAt        <  1:2678985/148‑1 (MQ=255)
                                                                                                                                             taatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATc       >  2:678479/1‑148 (MQ=255)
                                                                                                                                             taatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATc       >  2:21700/1‑148 (MQ=255)
                                                                                                                                                ttCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCaaa    >  2:2813808/1‑148 (MQ=255)
                                                                                                                                                 tCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGATATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAAt   >  1:764072/1‑148 (MQ=255)
                                                                                                                                                  cAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATg  <  2:2995519/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
AGTATCTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTTTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATG  >  CP009273/2463761‑2464053

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: