| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,543,629 | G→T | 8.2% | F92L (TTC→TTA) | yfeX ← | porphyrinogen oxidase, cytoplasmic |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,543,629 | 0 | G | T | 8.2% | 685.7 / 23.6 | 195 | F92L (TTC→TTA) | yfeX | porphyrinogen oxidase, cytoplasmic |
| Reads supporting (aligned to +/- strand): ref base G (96/83); new base T (5/11); total (101/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.17e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
AAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAA > CP009273/2543483‑2543774 | aaGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGa < 1:642051/148‑1 (MQ=255)aaGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGa < 1:795865/148‑1 (MQ=255) aGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGaa > 1:2876182/1‑148 (MQ=255) cGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTg < 2:3231236/148‑1 (MQ=255) gCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTgg < 2:469592/148‑1 (MQ=255) tCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGgt < 2:2975848/148‑1 (MQ=255) tCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGgt < 2:2975714/148‑1 (MQ=255) aGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGgtcg < 2:2444269/148‑1 (MQ=255) gCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGgcgc > 1:531143/1‑148 (MQ=255) gCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGgcgc > 1:2319365/1‑148 (MQ=255) tctTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCaa > 2:2211637/1‑148 (MQ=255) cAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGcc < 1:1298500/148‑1 (MQ=255) aCCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCtt > 1:2134984/1‑148 (MQ=255) aCCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCtt < 2:3370459/148‑1 (MQ=255) cccAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCttt < 1:1484142/148‑1 (MQ=255) aCGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCg > 2:2562074/1‑148 (MQ=255) cGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGt < 2:295090/148‑1 (MQ=255) cGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGt > 2:3452377/1‑148 (MQ=255) cGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGt > 2:2358095/1‑148 (MQ=255) cGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCGTTACCGt > 1:3556811/1‑148 (MQ=255) aaGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGc > 2:2837796/1‑148 (MQ=255) aaGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGc < 1:1025261/148‑1 (MQ=255) aaGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGc < 1:2802007/148‑1 (MQ=255) aGCCGTCGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGcc < 2:389000/148‑1 (MQ=255) ccGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCg > 1:2980762/1‑148 (MQ=255) tGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGaa > 2:532484/1‑148 (MQ=255) ggATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGaaa > 1:2549814/1‑148 (MQ=255) ggATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGaaa > 1:2549597/1‑148 (MQ=255) ggATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGaaa > 1:932621/1‑148 (MQ=255) ggATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGaaa > 1:932533/1‑148 (MQ=255) tctcTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGCAAATc > 2:1974344/1‑148 (MQ=255) tctcTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATc > 1:475290/1‑148 (MQ=255) tctcTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATc > 1:114432/1‑148 (MQ=255) ttcttTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTc < 2:2513338/148‑1 (MQ=255) ttcttTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTc > 1:1870494/1‑148 (MQ=255) tCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGctc > 1:3411533/1‑148 (MQ=255) cACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCGTTACCGTAGCCCGGAAAATCTTTCAGctcg > 1:857321/1‑147 (MQ=255) aCTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCtctt < 1:877239/148‑1 (MQ=255) cTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCCAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCtcttc > 1:1370886/1‑148 (MQ=255) cTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCtcttc < 2:1886306/148‑1 (MQ=255) ttCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCtcttct < 1:2214865/148‑1 (MQ=255) tCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTg < 1:785168/148‑1 (MQ=255) tGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGcccc > 1:3083415/1‑148 (MQ=255) tGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGcccc > 1:3059625/1‑148 (MQ=255) gCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCa < 2:1049384/148‑1 (MQ=255) gCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCa < 2:299320/148‑1 (MQ=255) tCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAAcgc < 2:595761/148‑1 (MQ=255) tCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAAcgc < 2:595754/148‑1 (MQ=255) tCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCGTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAAcgc > 1:679572/1‑148 (MQ=255) aCCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAAcgccg < 2:2035714/148‑1 (MQ=255) aaGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAAcgccgccgc > 1:1623261/1‑148 (MQ=255) aGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCCACACATCGAACTGGGTCGTCGGCGCCAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCt > 1:2557658/1‑148 (MQ=255) aGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCCACGCCGCCGCt > 2:3081974/1‑148 (MQ=255) aGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCt > 1:250132/1‑148 (MQ=255) ggCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCCAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTc > 1:61878/1‑148 (MQ=255) ttCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCaga > 1:2420410/1‑148 (MQ=255) cgccgcCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTGTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAgcgcgc < 2:2803996/148‑1 (MQ=255) cgccTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAg > 1:407234/1‑148 (MQ=255) cgccTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAg > 1:407808/1‑148 (MQ=255) gccTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAgg < 1:762717/148‑1 (MQ=255) cTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGgtg < 2:791199/148‑1 (MQ=255) tGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCCAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGgtgt > 1:2656228/1‑148 (MQ=255) tGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGgtgt < 2:1699136/148‑1 (MQ=255) gggCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGtgtt < 2:1091047/148‑1 (MQ=255) ggCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGtgttg > 2:1414274/1‑148 (MQ=255) ggCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGtgttg > 2:630681/1‑148 (MQ=255) ggCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGtgttg < 1:1054469/148‑1 (MQ=255) aCAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTTCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTAc > 1:2873331/1‑148 (MQ=255) gagaAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCaa < 2:725773/148‑1 (MQ=255) gagaAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCaa < 2:3190200/148‑1 (MQ=255) agaAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCaaa < 2:932533/148‑1 (MQ=255) agaAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCaaa < 2:932621/148‑1 (MQ=255) gTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCa < 1:1036689/148‑1 (MQ=255) gTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCa < 2:1680974/148‑1 (MQ=255) tttACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCaa > 1:3233479/1‑148 (MQ=255) tttACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCaa > 1:3236964/1‑148 (MQ=255) ttACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAac > 1:634141/1‑148 (MQ=255) aCGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTCCCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAacca < 2:1177203/148‑1 (MQ=255) cgtcgtGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAaccac > 2:215964/1‑148 (MQ=255) tGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCAc < 1:1425048/148‑1 (MQ=255) gACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCAcc < 2:2738844/148‑1 (MQ=255) aCGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCa > 1:1541461/1‑148 (MQ=255) aCGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCa > 2:1729804/1‑148 (MQ=255) gCAGAGAAAGAATGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTATTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAg < 2:256885/148‑1 (MQ=255) gagaAAGAATGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATg > 2:1493141/1‑148 (MQ=255) gagaAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATg > 2:1723847/1‑148 (MQ=255) agaaagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATgc > 1:257902/1‑148 (MQ=255) aaagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATgcgc > 1:224554/1‑148 (MQ=255) aaagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATgcgc > 2:2816691/1‑148 (MQ=255) aagaaTGTGGATCAACACATCTAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGcgcg < 2:3175923/148‑1 (MQ=255) aagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGcgcg > 1:3506679/1‑148 (MQ=255) aagaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGcgcg > 1:1747814/1‑148 (MQ=255) gaaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTc < 2:3547161/148‑1 (MQ=255) aaTGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTcc > 2:2227066/1‑148 (MQ=255) tgtgGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTGTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCgg < 2:2009935/148‑1 (MQ=255) gtgGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCggg > 1:1448910/1‑148 (MQ=255) aTCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTGACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAAtt < 1:3181824/148‑1 (MQ=255) acacATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGCCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGc < 1:3395537/148‑1 (MQ=255) cacaTCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCt > 2:262661/1‑148 (MQ=255) tCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCaa > 1:23584/1‑148 (MQ=255) | AAGCCGCTCAGGTCACGCTCTTCAACCCAACGGAAGCCGTGGATCTCTTCTTTCACTTCAATGCAGTCACCAAAGGCTTCCATCGCCGCCTGGGCGACAGAGAAGTTTACGTCGTGACGCAGAGAAAGAATGTGGATCAACACATCGAACTGGGTCGTCGGCGCAAGGCCTTTACCGTAGCCCGGAAAATCTTTCAGCTCTTCTGCCCCAACGCCGCCGCTCAGAGCGCGCCAGGTGTTGTTACCAAAGGCAACCACCGCACCAAGATGCGCGTCCGGGAATTTCGCTTCAA > CP009273/2543483‑2543774 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |