| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,711,755 | C→A | 94.4% | D45Y (GAC→TAC) | yfiF ← | putative methyltransferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,711,755 | 0 | C | A | 94.4% | 620.3 / 25.6 | 216 | D45Y (GAC→TAC) | yfiF | putative methyltransferase |
| Reads supporting (aligned to +/- strand): ref base C (7/5); new base A (95/109); total (102/114) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.55e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01 | |||||||||||
Only 100 of 216 total aligned reads displayed.
ACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTCATGCTTTTCTCCA > CP009273/2711609‑2711898 | cTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAg > 1:2519825/1‑148 (MQ=255) cTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAg > 1:3259318/1‑148 (MQ=255) cTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGCCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAg > 1:1494142/1‑148 (MQ=255) ttttACCACTGATCCCACGGTGATCGGCCTTTTCCGGCGTCTCATCCCCCGGCGCGCGGCAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGc < 2:853539/148‑1 (MQ=255) tACCACTGAGGCCACGGTTATCGGCCTTTCCCGGGGTCCCACCACCGGGCGCGGGGCAACCCGGGCCCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACg < 1:2045568/148‑1 (MQ=255) aCTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCACCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGAt > 1:3037438/1‑148 (MQ=255) ttGCCACGGTTAGCGGCGTTTTCCGGCGTCCCAACCCCGGGCGGGCGGCAACCCGGCCCCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTc < 1:1875973/147‑1 (MQ=255) aTGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTc > 2:2998079/1‑148 (MQ=255) cccACGGTGATGGGCCTTTGCGGGGGTCTAACCCCCCGGCGCGCGGGAACGGGGGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTACt < 1:3537507/147‑1 (MQ=255) ccGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGAc > 1:1854738/1‑148 (MQ=255) cGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGGGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGAcg < 2:1465785/148‑1 (MQ=255) cGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGAcg > 2:1394452/1‑148 (MQ=255) cGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGAcg > 2:1394440/1‑148 (MQ=255) gTGATCGGCCTTTGCCGGCGACACACCCCCGGGCGGGCGGCAAACCGGCCCCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGAcgc < 1:1163215/148‑1 (MQ=255) tGATCGGCCTGTCCCGGCGACTCATCACCCGGCGCGCGGGAACCCGGGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGAcgcc < 2:896837/148‑1 (MQ=255) gATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGAcgccc > 2:1038574/1‑148 (MQ=255) aTCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCTGGAcgcccg > 1:3168665/1‑148 (MQ=255) tCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGAcgcccgc > 2:1186837/1‑148 (MQ=255) tCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGAcgcccgc > 2:1095888/1‑148 (MQ=255) ccTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGccccc > 2:2264308/1‑148 (MQ=255) ccTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGccccc > 2:2022154/1‑148 (MQ=255) ccTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGccccc > 2:2959492/1‑148 (MQ=255) ccTTTTCCGGCGACTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTAACGGGGCTTACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCAGCACGCCCGccccc > 1:456447/1‑148 (MQ=255) ttcccgggCGTCACACCCCCCGGCGGGGGGTAACCCGGGCCCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCtt < 1:1823995/142‑1 (MQ=255) tttCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCTGGACGCCCGCCCCCttt > 2:2506570/1‑148 (MQ=255) ttgcgggCGTCTCATCCCCCGGCGCGGGGGAACCGGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCttt < 1:2884991/143‑1 (MQ=255) tCCGGCGTCACATCCCCCGGCGCGCGGGAAACCGGGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTcc < 2:2039435/148‑1 (MQ=255) gCGTCTCATCCCCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGt < 2:3471491/148‑1 (MQ=255) gCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGt > 2:404647/1‑148 (MQ=255) cGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTa > 1:1784230/1‑148 (MQ=255) tcaccccccGGCGCGCGGGAAACCGGGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTAcgcg < 2:1949235/142‑1 (MQ=255) acccccgggCGCGCGGCACCCCGGCCCCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCggg < 1:87490/141‑1 (MQ=255) acccccgggCGCGCGGAAACCGGGGCCCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCggg < 1:3396062/141‑1 (MQ=255) acccccGGCGCGGGGCAACCCGGGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGt < 1:3121377/145‑1 (MQ=255) aCCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTACGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTtg > 2:2121297/1‑148 (MQ=255) aCCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTCCGCGGGTtg > 2:2126656/1‑148 (MQ=255) ccGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTtgtg < 2:1651748/148‑1 (MQ=255) cgcgggGTAACCCGGGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTa < 1:2764895/148‑1 (MQ=255) cgcgGGAAACCGTGCCCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACg < 2:672476/148‑1 (MQ=255) gggggAAACCGGGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGt < 2:3409375/146‑1 (MQ=255) cgGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGtt > 1:2148255/1‑148 (MQ=255) ggAACCCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTa < 2:848890/148‑1 (MQ=255) gAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTAt > 1:1706927/1‑148 (MQ=255) aacccGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATc < 2:3209479/145‑1 (MQ=255) ccGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGa < 2:2714178/148‑1 (MQ=255) ccGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGa < 2:3162716/148‑1 (MQ=255) gcgcCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGACCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAatca < 1:1306701/148‑1 (MQ=255) gcgcCACGGCGAATCGTCCCACGTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAatca < 2:2610947/148‑1 (MQ=255) gcCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAatcatc < 2:3303838/148‑1 (MQ=255) gcCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAatcatc < 2:3304274/148‑1 (MQ=255) ccACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAatcatca > 1:888035/1‑148 (MQ=255) aCGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAatcatcatc > 2:1753284/1‑148 (MQ=255) aaTCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCg > 2:3452390/1‑148 (MQ=255) aaTCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCg > 2:553433/1‑148 (MQ=255) aTCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCgg > 1:2038219/1‑148 (MQ=255) ttCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGaca > 1:902955/1‑148 (MQ=255) cccACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGacata > 1:2530257/1‑148 (MQ=255) cTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATc > 2:3177320/1‑148 (MQ=255) ttGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCa < 2:3259318/148‑1 (MQ=255) tGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCAc < 2:3124739/148‑1 (MQ=255) gCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACt < 1:1019494/148‑1 (MQ=255) cGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACtt < 2:2867548/148‑1 (MQ=255) gTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTg < 1:1148556/148‑1 (MQ=255) tCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGa > 2:1328765/1‑148 (MQ=255) ggggCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCtt > 2:3067793/1‑148 (MQ=255) gggCTGCCTCTGTTTGTCAGCGCGGGCGGGGCGACGGCCCCCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTg < 2:1842608/148‑1 (MQ=255) gggCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTg < 2:1737495/148‑1 (MQ=255) gggCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTg < 1:3461646/148‑1 (MQ=255) gggCTGACTCTGTTTGTCAACGCGGGCGGGGCGACGGCCACCGTAAGCACGAGAGTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTg > 2:1832619/1‑148 (MQ=255) ggCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGc > 1:1106543/1‑148 (MQ=255) ggCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGc > 2:1917081/1‑148 (MQ=255) tGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGc < 1:2506570/148‑1 (MQ=255) gACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCt < 2:77600/148‑1 (MQ=255) ctctGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCttt < 1:2550651/148‑1 (MQ=255) ctctGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCttt < 1:3215477/148‑1 (MQ=255) ctGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTa < 2:2366533/148‑1 (MQ=255) ctGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTa < 2:838113/148‑1 (MQ=255) ctGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTa < 1:2103663/148‑1 (MQ=255) tttGTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCt < 1:404647/148‑1 (MQ=255) gTCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCtttc < 2:2037708/148‑1 (MQ=255) tCATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCtttca > 1:2234954/1‑148 (MQ=255) cATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCtttcat > 1:1525849/1‑148 (MQ=255) cATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCtttcat < 2:500672/148‑1 (MQ=255) cATCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCGTTTTCCgttcat > 1:37996/1‑148 (MQ=255) aTCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCtttcatt > 1:249442/1‑148 (MQ=255) tCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCtttcattt < 1:802580/148‑1 (MQ=255) tCGCGGGCGGGGCGACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCtttcagtt > 1:3478153/1‑148 (MQ=255) cgcgGGCGGGGCGACGGCCACAGTAAGCACGAGATTTTCCTGGACGCGCGCGCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGCATCATCATCACTGCGGACATACATCACTTTGAACTTTCCGCTTTTACCtttcatttc < 2:456447/148‑1 (MQ=255) ggcggggcgACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCg < 1:672006/148‑1 (MQ=255) ggggcgACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTc < 1:1394441/148‑1 (MQ=255) gggcgACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTCa > 2:1320963/1‑148 (MQ=255) ggcgACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCGTTCATTTCATCGTTCAt > 1:746697/1‑148 (MQ=255) gcgACGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTCATg < 1:2946704/148‑1 (MQ=255) cGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATNAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCGTTTTCCTTTCATTTCATCGTTCATGCttt > 1:1805695/1‑148 (MQ=255) cGGCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTCATGCttt > 2:2841998/1‑148 (MQ=255) ggCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCAGTGCGGACATACATCAGATTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTCATGCtttt < 1:3490106/148‑1 (MQ=255) ggCCACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTCATGCtttt < 1:459395/148‑1 (MQ=255) ccACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTCATGCTTTtct > 2:2803130/1‑148 (MQ=255) ccACCGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCGTTTTCCTTTCATTTCATCGTTAATGCttttat > 1:422599/1‑146 (MQ=255) ccGTAAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTCATGCTTTTCTcca > 1:1441887/1‑148 (MQ=255) | ACTTTTACCACTGATGCCACCGTGATCGGCCTTTTCCGGCGTCTCATCACCCGGCGCGCGGGAAACCGTGCGCCACGGCGAATCTTCCCACTTGCGGTCACGGGGCTGACTCTGTTTGTCATCGCGGGCGGGGCGACGGCCACCGTCAGCACGAGATTTTCCTGGACGCCCGCCCCCTTTCCCGGTACGCGGGTTGTGGGTACGTTTATCAGAATCATCATCACTGCGGACATACATCACTTTGACCTTGCCGCTTTTACCTTTCATTTCATCGTTCATGCTTTTCTCCA > CP009273/2711609‑2711898 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |