| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 2,771,358 | G→A | 100% | intergenic (+217/+147) | ypjF → / ← ypjA | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system/adhesin‑like autotransporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 2,771,358 | 0 | G | A | 100.0% | 682.0 / ‑6.7 | 216 | intergenic (+217/+147) | ypjF/ypjA | CP4‑57 prophage; toxin of the YpjF‑YfjZ toxin‑antitoxin system/adhesin‑like autotransporter |
| Reads supporting (aligned to +/- strand): ref base G (0/1); major base A (111/101); minor base C (0/2); total (111/105) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 216 total aligned reads displayed.
CCTCCCCTCCCCCGAAAAAACCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGAT > CP009273/2771213‑2771502 | cctcccctccCCCGAAAAAACCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAgt < 2:3156780/148‑1 (MQ=255) tccccCGAAAAAACCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGa > 1:1711862/1‑148 (MQ=255) ccccGAAAAAACCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGaca < 2:2854073/148‑1 (MQ=255) cGAAAAAACCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGacaaca > 1:1077988/1‑148 (MQ=255) aaaaaaCCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACAcc > 1:3106019/1‑148 (MQ=255) aaaaaCCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACca < 1:266087/148‑1 (MQ=255) aCCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACcaacaa > 1:3132424/1‑148 (MQ=255) aCCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACcaacaa > 1:2983193/1‑148 (MQ=255) ccTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACaaa > 1:1013342/1‑148 (MQ=255) gACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTTAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAAc < 2:2717668/148‑1 (MQ=255) aTTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAgg < 2:3265559/148‑1 (MQ=255) aTTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAgg < 2:473747/148‑1 (MQ=255) ttttCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGAACAGTGTAAGGACAACACCAACAAAAACAGGa < 1:3130870/148‑1 (MQ=255) tCTTTTAGGACCAACAATGGGACCAAAATGAAAATTTAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGt < 2:374632/148‑1 (MQ=255) tCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGt < 1:1009320/148‑1 (MQ=255) tCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGt < 1:1171472/148‑1 (MQ=255) cTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGtt < 2:625033/148‑1 (MQ=255) tttAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAg < 1:1544259/148‑1 (MQ=255) ttAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGa < 2:643266/148‑1 (MQ=255) tAGGACCAACAATGGGACAAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGaa < 2:2334491/148‑1 (MQ=255) aGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAg < 1:878993/148‑1 (MQ=255) ggACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGt < 2:1742803/148‑1 (MQ=255) aCCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGtct < 1:2917597/148‑1 (MQ=255) tGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCaaaa < 2:3027858/148‑1 (MQ=255) tGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCaaaa > 2:2501843/1‑148 (MQ=255) tGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCaaaa > 1:1777958/1‑148 (MQ=255) ttgACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAac < 1:1585061/146‑1 (MQ=255) ggACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAaca > 1:1485410/1‑148 (MQ=255) gACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCCATCATGATTGGACAGTGTAAGGACAACACAAACAAAATCAGGAAGTTAGAAGTCTCAGCAAAacac > 1:3170752/1‑148 (MQ=255) aaaTGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGGCAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGAcc > 2:2107417/1‑148 (MQ=255) aaaTGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGAcc < 1:3079323/148‑1 (MQ=255) aaaTGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGAcc > 1:3447452/1‑148 (MQ=255) gAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGAc > 2:3003861/1‑148 (MQ=255) aaTTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGt < 1:1646306/148‑1 (MQ=255) aaTTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATAATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGt > 2:3137969/1‑148 (MQ=255) ttGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTga > 1:2791472/1‑148 (MQ=255) ttGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTga > 2:1548723/1‑148 (MQ=255) ttGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTga > 1:3487180/1‑148 (MQ=255) ttGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTga > 1:3487006/1‑148 (MQ=255) tGAACTGAAGATTACAATCAATTTAACAACCAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTgag < 1:2182762/148‑1 (MQ=255) aaCTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTgagga > 1:2883886/1‑148 (MQ=255) aCTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTgaggag > 1:2534094/1‑148 (MQ=255) aCTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTgaggag > 2:1155226/1‑148 (MQ=255) cTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGgaga > 2:2885081/1‑148 (MQ=255) gAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACa > 1:2166349/1‑148 (MQ=255) aGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGCGACATa > 2:2237489/1‑148 (MQ=255) gATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATaa < 2:3117918/148‑1 (MQ=255) gATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATaa < 2:2169901/148‑1 (MQ=255) gATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATaa < 2:1983954/148‑1 (MQ=255) gATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATaa < 2:1456220/148‑1 (MQ=255) gATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACAGaa > 2:2519694/1‑148 (MQ=255) ttACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATaaaa < 1:2068049/148‑1 (MQ=255) tACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAg > 2:123449/1‑148 (MQ=255) caatcaatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGa < 2:814890/148‑1 (MQ=255) tcaatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATAc > 1:1772572/1‑148 (MQ=255) caatTTAACAACAAGTTACACAACCAATTCAGACTCGGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACNACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACg > 1:1801838/1‑148 (MQ=255) caatTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACg > 1:1135097/1‑148 (MQ=255) atTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCa > 1:606039/1‑148 (MQ=255) aacaaGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGc > 2:1681065/1‑148 (MQ=255) aacaaGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACAGAAAAGGATACGCAAAGGAGc > 2:3332562/1‑148 (MQ=255) caaGTTACACAACCAATTCAGACTCCGCCAGCCCACCACTCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCcg < 2:553363/148‑1 (MQ=255) ttACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGc > 2:1074352/1‑148 (MQ=255) ttACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGc > 1:3290333/1‑148 (MQ=255) tACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCt > 2:2026374/1‑148 (MQ=255) cacaACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCCGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTcc > 2:2813187/1‑148 (MQ=255) cacaACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTcc > 2:1191756/1‑148 (MQ=255) cacaACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTcc < 2:1285341/148‑1 (MQ=255) acaACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAACCCAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGCCGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCt < 1:2446834/148‑1 (MQ=255) aCCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGt > 1:1512152/1‑148 (MQ=255) ccAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTa > 1:672280/1‑148 (MQ=255) ccAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTa < 1:1586363/148‑1 (MQ=255) cAATTCAGACTCCGCCAGCCCACCAATCTTGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTaa < 2:1783558/148‑1 (MQ=255) cAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTaa > 1:820204/1‑148 (MQ=255) aaTTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAAc > 1:3283061/1‑148 (MQ=255) aaTTCAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAAc < 2:2930686/148‑1 (MQ=255) aaTACAGACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAAc < 1:3310479/148‑1 (MQ=255) gACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGaaa < 2:2319559/148‑1 (MQ=255) gACTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGaaa < 2:1538198/148‑1 (MQ=255) cTCCGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGc < 2:2136878/148‑1 (MQ=255) ccGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGccc > 1:1284546/1‑148 (MQ=255) cGCCAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCca < 1:457083/148‑1 (MQ=255) ccAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGACGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAGGGAGCCGCGGCTCCTGGTAACATGAAAGCCcacc > 2:3138363/1‑147 (MQ=255) cAGCCCACCAATCATGATTGGACAGTGTAAGGACAACACCAACAAACACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAg < 1:634803/148‑1 (MQ=255) ccaATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTggg > 2:2416674/1‑148 (MQ=255) caATCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGc > 1:1295868/1‑148 (MQ=255) caATCATGAATGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGAAACATGAAAGCCCACAGATGTGGGc > 1:1974328/1‑148 (MQ=255) aaTCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATCAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCt > 2:3209122/1‑148 (MQ=255) aaTCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCt < 1:1429644/148‑1 (MQ=255) aTCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCtt > 1:1556051/1‑148 (MQ=255) tCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCttt > 1:2106674/1‑148 (MQ=255) tCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCttt > 2:2610047/1‑148 (MQ=255) tCATGATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCttt < 2:719885/148‑1 (MQ=255) cATGTTTGGAATGTGTAAGTACAACACAAACAAAAACATGAAGTTATAAGTATCAGAAAAACACAGACCTGAGTGTGAGGCGACATATACGGATACGCTATGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCtttt < 1:506815/148‑1 (MQ=255) gATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATCCGCAAAGGAGCCGCGTCTACTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCg < 1:2268990/148‑1 (MQ=255) gATTGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATCCGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCg < 1:337683/148‑1 (MQ=255) aTTGGACGGTGTAAGGACAACACCAACAAACACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGt < 1:617063/148‑1 (MQ=255) ttGGACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGtt < 2:3106019/148‑1 (MQ=255) ggACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAACGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGa < 2:2673291/148‑1 (MQ=255) gACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTCACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGAt > 2:345013/1‑148 (MQ=255) gACAGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGAt > 2:2402568/1‑148 (MQ=255) | CCTCCCCTCCCCCGAAAAAACCTGACATTTTCTTTTAGGACCAACAATGGGACCAAAATGAAAATTGAACTGAAGATTACAATCAATTTAACAACAAGTTACACAACCAATTCAGACTCCGCCAGCCCACCAATCATGATTGGACGGTGTAAGGACAACACCAACAAAAACAGGAAGTTAGAAGTCTCAGCAAAACACCGACCAGACGGTGAGGAGACATAAAAGGATACGCAAAGGAGCCGCGGCTCCTGGTAACATGAAAGCCCACAGATGTGGGCTTTTTCGTTGAT > CP009273/2771213‑2771502 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |