Predicted mutation
evidence seq id position mutation freq annotation gene description
RA CP009273 2,964,899 C→A 5.3% intergenic (+51/‑57) ygdR → / → tas DUF903 family verified lipoprotein/putative NADP(H)‑dependent aldo‑keto reductase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0092732,964,8990CA 5.3% 748.0 / 10.7 195intergenic (+51/‑57)ygdR/tasDUF903 family verified lipoprotein/putative NADP(H)‑dependent aldo‑keto reductase
Reads supporting (aligned to +/- strand):  ref base C (88/96);  new base A (6/5);  total (94/101)
Fisher's exact test for biased strand distribution p-value = 7.61e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 214 total aligned reads displayed.

AATTGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAGCCG  >  CP009273/2964752‑2965046
                                                                                                                                                   |                                                                                                                                                   
aaTTGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCtttcccttttc                                                                                                                                                     <  2:2940701/148‑1 (MQ=255)
 aTTGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCtttcccttttcc                                                                                                                                                    >  2:1819113/1‑148 (MQ=255)
    gatgatgatACCGGGCTGGTGAGTTATCACGATCAGAAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTttcccttttccctt                                                                                                                                                 <  1:641406/148‑1 (MQ=255)
      tgatgatACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTttcccttcc                                                                                                                                               >  1:1988908/1‑148 (MQ=255)
      tgatgatACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTttcccttcc                                                                                                                                               >  2:1703165/1‑148 (MQ=255)
            tACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGc                                                                                                                                         <  1:318526/148‑1 (MQ=255)
            tACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGc                                                                                                                                         <  1:319580/148‑1 (MQ=255)
             aCCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGcc                                                                                                                                        <  1:1826441/148‑1 (MQ=255)
              ccGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCa                                                                                                                                       <  2:149398/148‑1 (MQ=255)
              ccGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCa                                                                                                                                       <  2:3374810/148‑1 (MQ=255)
               cGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCAt                                                                                                                                      >  2:2164078/1‑148 (MQ=255)
               cGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCAt                                                                                                                                      <  2:1777426/148‑1 (MQ=255)
               cGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCAt                                                                                                                                      >  2:1723953/1‑148 (MQ=255)
               cGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCAt                                                                                                                                      <  2:1663451/148‑1 (MQ=255)
               cGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCAt                                                                                                                                      <  2:1661007/148‑1 (MQ=255)
                 ggCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCAttt                                                                                                                                    >  2:85188/1‑148 (MQ=255)
                  gCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCAtttt                                                                                                                                   >  1:871206/1‑148 (MQ=255)
                  gCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCAtttt                                                                                                                                   >  2:1680100/1‑148 (MQ=255)
                    tGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTta                                                                                                                                 >  1:2062204/1‑148 (MQ=255)
                     ggTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTtat                                                                                                                                <  1:1313368/148‑1 (MQ=255)
                       tGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTatat                                                                                                                              <  1:1244102/148‑1 (MQ=255)
                        gAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATAtt                                                                                                                             <  1:1972695/148‑1 (MQ=255)
                         aGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTc                                                                                                                            <  2:3233989/148‑1 (MQ=255)
                            tATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCtt                                                                                                                         <  1:567702/148‑1 (MQ=255)
                             aTCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTa                                                                                                                        <  1:3498772/148‑1 (MQ=255)
                              tCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTAt                                                                                                                       >  1:1025288/1‑148 (MQ=255)
                                aCGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGt                                                                                                                     <  1:1866496/148‑1 (MQ=255)
                                 cGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTc                                                                                                                    >  2:683213/1‑148 (MQ=255)
                                     cAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGa                                                                                                                <  2:2062204/148‑1 (MQ=255)
                                       gCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGAtt                                                                                                              <  2:3008992/148‑1 (MQ=255)
                                       gCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGAtt                                                                                                              >  2:1792521/1‑148 (MQ=255)
                                           ggTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTACGTATGTCGTGATTATaa                                                                                                          >  2:300308/1‑148 (MQ=255)
                                           ggTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATaa                                                                                                          >  1:2775534/1‑148 (MQ=255)
                                               aCGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAg                                                                                                      <  2:2283910/148‑1 (MQ=255)
                                                   gATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGaaa                                                                                                  <  2:2358665/148‑1 (MQ=255)
                                                   gATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCATTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGaaa                                                                                                  <  2:2813393/148‑1 (MQ=255)
                                                    aTGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAAc                                                                                                 <  1:2964850/148‑1 (MQ=255)
                                                      gCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACgg                                                                                               <  2:2589099/148‑1 (MQ=255)
                                                      gCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACgg                                                                                               <  2:1811662/148‑1 (MQ=255)
                                                      gCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACgg                                                                                               <  2:3297110/148‑1 (MQ=255)
                                                         aaTTAACCGTGTTGTTGTTTCGCAAATTTTTTAACGTAAACAAATACGGTCAGCATCCGGCTGGCATTAATATTTTTCTCTTTCCCTTTCCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTa                                                                                            <  1:2275112/148‑1 (MQ=255)
                                                          aTTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTAt                                                                                           >  1:2423995/1‑148 (MQ=255)
                                                            tAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGc                                                                                         >  2:559265/1‑148 (MQ=255)
                                                            tAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGc                                                                                         >  1:2632440/1‑148 (MQ=255)
                                                               ccGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCTTGATTATAAAAAGGAAACGGCTATGCAat                                                                                      <  2:1527146/148‑1 (MQ=255)
                                                               ccGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAat                                                                                      <  2:1527746/148‑1 (MQ=255)
                                                                ctttatgatgTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAata                                                                                     <  2:907350/144‑1 (MQ=255)
                                                                  tgatgaTGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATc                                                                                   >  2:409939/1‑148 (MQ=255)
                                                                   gatgatGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCa                                                                                  <  2:2423827/148‑1 (MQ=255)
                                                                    atgatgTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCAc                                                                                 >  1:862726/1‑148 (MQ=255)
                                                                       atgTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGt                                                                              <  2:113935/148‑1 (MQ=255)
                                                                       atgTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGt                                                                              <  2:1186526/148‑1 (MQ=255)
                                                                       atgTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGt                                                                              >  2:1944078/1‑148 (MQ=255)
                                                                          tttCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGtata                                                                           >  1:3083015/1‑148 (MQ=255)
                                                                           ttCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATAc                                                                          >  1:2416931/1‑148 (MQ=255)
                                                                               cAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCca                                                                      >  1:430448/1‑148 (MQ=255)
                                                                                   ttattGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGt                                                                  >  2:2467846/1‑148 (MQ=255)
                                                                                       tGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGc                                                              >  2:614063/1‑148 (MQ=255)
                                                                                          aCGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTgg                                                           <  2:3491232/148‑1 (MQ=255)
                                                                                             ttAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAg                                                        >  2:254048/1‑148 (MQ=255)
                                                                                             ttAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAg                                                        >  2:254291/1‑148 (MQ=255)
                                                                                              tAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGt                                                       <  2:3538539/148‑1 (MQ=255)
                                                                                                aCAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCGTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCa                                                     <  2:231717/148‑1 (MQ=255)
                                                                                                  aaaTAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGc                                                   <  1:1771216/148‑1 (MQ=255)
                                                                                                  aaaTAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGc                                                   <  1:3524997/148‑1 (MQ=255)
                                                                                                    aTAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCAc                                                 >  2:3186602/1‑148 (MQ=255)
                                                                                                        ggTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTg                                             >  2:2833487/1‑148 (MQ=255)
                                                                                                            aGCCTCCGGCTGGCCCTACGACGTTTCTCCGTCCCAGTTCCCTCCCCGCGGCCATTTTTATAGTCCGTCTGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGc                                         <  2:2134478/148‑1 (MQ=255)
                                                                                                            aGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCAAAGTACGAGGAACGGAAGAACGCTgggga                                         >  2:1106359/1‑147 (MQ=255)
                                                                                                             gCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCt                                        >  1:1165736/1‑148 (MQ=255)
                                                                                                             gCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCt                                        >  1:1168353/1‑148 (MQ=255)
                                                                                                              cATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCtt                                       >  1:878304/1‑148 (MQ=255)
                                                                                                               aTCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTg                                      <  2:3126409/148‑1 (MQ=255)
                                                                                                               aTCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTg                                      <  2:2884143/148‑1 (MQ=255)
                                                                                                                    gCTGGCCTTAAGATTTTTCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACg                                 <  1:2543062/148‑1 (MQ=255)
                                                                                                                      tGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGAt                               <  1:208737/148‑1 (MQ=255)
                                                                                                                        gCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGa                             <  2:871206/148‑1 (MQ=255)
                                                                                                                          cTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACg                           >  1:327276/1‑148 (MQ=255)
                                                                                                                          cTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACg                           >  1:1890338/1‑148 (MQ=255)
                                                                                                                          cTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACg                           >  1:2905242/1‑148 (MQ=255)
                                                                                                                           ttAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTTATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGt                          <  1:683213/148‑1 (MQ=255)
                                                                                                                           ttAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGt                          <  1:559265/148‑1 (MQ=255)
                                                                                                                           ttAAGATTTTTCTCTTTCCCTTTTCCCTACCCTCTCCCATTATTATATAACTAATGACGTGATTAAAAAAAGGAAACACCTATCCAATAACAAAGTAAACACAACAGATCGCTCGAAGTCAGCACGCTGTGGCTAGGCACGATGaaga                          >  1:3140610/1‑145 (MQ=255)
                                                                                                                             aaGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGttt                        >  1:1910407/1‑148 (MQ=255)
                                                                                                                                  ttttCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTga                   >  2:2692014/1‑148 (MQ=255)
                                                                                                                                   tttCTCTTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaa                  <  2:1025288/148‑1 (MQ=255)
                                                                                                                                     tctcTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaaca                >  2:2439794/1‑148 (MQ=255)
                                                                                                                                     tctcTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaaca                >  2:2252956/1‑148 (MQ=255)
                                                                                                                                     tctcTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaaca                >  2:2252720/1‑148 (MQ=255)
                                                                                                                                     tctcTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaaca                >  1:3057467/1‑148 (MQ=255)
                                                                                                                                     tctcTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaaca                >  1:1284590/1‑148 (MQ=255)
                                                                                                                                      ctctTTCCCTTTTACCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaacag               <  2:2142554/148‑1 (MQ=255)
                                                                                                                                        ctTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaacagaa             >  2:2880087/1‑148 (MQ=255)
                                                                                                                                          ttcccttttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaacagaaca           >  1:1465317/1‑148 (MQ=255)
                                                                                                                                          ttcccttttccctaCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTgaacagaaca           <  1:2690969/148‑1 (MQ=255)
                                                                                                                                            cccttttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGc         >  2:1761895/1‑148 (MQ=255)
                                                                                                                                            cccttttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGc         >  2:3021805/1‑148 (MQ=255)
                                                                                                                                                tttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAg     <  2:773786/148‑1 (MQ=255)
                                                                                                                                                tttcccttCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAg     >  1:1819141/1‑148 (MQ=255)
                                                                                                                                                   cccttccctCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAGCCg  <  1:2164078/148‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
AATTGATGATGATACCGGGCTGGTGAGTTATCACGATCAGCAAGGTAACGCGATGCAAATTAACCGTGATGATGTTTCGCAAATTATTGAACGTTAACAAATAAGGTCAGCATCCGGCTGGCCTTAAGATTTTTCTCTTTCCCTTTTCCCTTCCCTCTGCCATTTTTATATTCCTTATGTCGTGATTATAAAAAGGAAACGGCTATGCAATATCACCGTATACCCCACAGTTCGCTGGAAGTCAGCACGCTGGGGCTTGGCACGATGACGTTTGGTGAACAGAACAGCGAAGCCG  >  CP009273/2964752‑2965046

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: