| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 1,981,521:1 | +A | 6.8% | intergenic (‑81/‑182) | azuC ← / → yecR | acid‑inducible small membrane‑associated protein/lipoprotein, function unknown |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 1,981,521 | 1 | . | A | 6.8% | 955.8 / 61.1 | 205 | intergenic (‑81/‑182) | azuC/yecR | acid‑inducible small membrane‑associated protein/lipoprotein, function unknown |
| Reads supporting (aligned to +/- strand): ref base . (101/90); new base A (4/10); total (105/100) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.92e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.33e-01 | |||||||||||
Only 100 of 209 total aligned reads displayed.
GGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGT > CP009273/1981376‑1981667 | ggTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑At < 1:3113759/148‑1 (MQ=255) tACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑Atgt < 2:1204169/148‑1 (MQ=255) tACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑Atgt > 2:352293/1‑148 (MQ=255) cGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGa < 2:2448114/148‑1 (MQ=255) cTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATa > 1:3384583/1‑148 (MQ=255) ttGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACaa > 2:1442661/1‑148 (MQ=255) gAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAAt < 2:725974/148‑1 (MQ=255) cGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATcac > 1:368240/1‑148 (MQ=255) tCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCACGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACAt < 2:1935330/148‑1 (MQ=255) ttGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATaa > 1:859944/1‑148 (MQ=255) ttGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATaa < 1:1439611/148‑1 (MQ=255) gCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATaaa < 2:3211604/148‑1 (MQ=255) gCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAAt < 1:2080432/148‑1 (MQ=255) gCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAAt < 2:2157864/148‑1 (MQ=255) gCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAAt < 1:413828/148‑1 (MQ=255) aTAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATaac > 1:2725391/1‑146 (MQ=255) aGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATAcccc < 2:822526/148‑1 (MQ=255) aGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATAcccc > 2:692692/1‑148 (MQ=255) gTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCt > 2:1895128/1‑148 (MQ=255) tATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCttt > 1:697068/1‑148 (MQ=255) tATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCttt > 1:1462002/1‑148 (MQ=255) aTTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTa < 2:580183/148‑1 (MQ=255) aTTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTa > 1:1330725/1‑148 (MQ=255) tGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAAt > 1:1534773/1‑148 (MQ=255) tGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAAt < 2:1010365/148‑1 (MQ=255) tGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAAt > 2:2156288/1‑148 (MQ=255) aCATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGt < 2:792829/148‑1 (MQ=255) cATACTTTTCAGGATTTTGCGTAGTTTCATAGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATAACAAAAATCAATCTTT‑ATGTGATAAAAATAACATAAATAACCCTTTAATGTta > 2:3472615/1‑148 (MQ=255) cATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTta < 1:624363/148‑1 (MQ=255) aTACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTtat > 2:232320/1‑148 (MQ=255) tACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTtata > 2:1971931/1‑148 (MQ=255) aCTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaa > 1:3103306/1‑148 (MQ=255) aCTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaa > 2:1662804/1‑148 (MQ=255) ttttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaaaa < 2:2657113/148‑1 (MQ=255) tttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATaaaa < 1:2193662/148‑1 (MQ=255) tttCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATaaaaa > 1:2912142/1‑148 (MQ=255) tCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATg < 2:1161111/148‑1 (MQ=255) cAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGa < 1:2412132/148‑1 (MQ=255) aGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGAt < 1:1728520/148‑1 (MQ=255) cgcAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCaaaaa < 1:1878012/148‑1 (MQ=255) gcAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCaaaaa < 2:383224/148‑1 (MQ=255) gcAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCaaaaaa > 2:3138706/1‑148 (MQ=255) tttCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAAAAGc > 2:3012557/1‑148 (MQ=255) tCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGccc > 1:1360415/1‑148 (MQ=255) cATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGcccc < 1:1477727/148‑1 (MQ=255) cATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGcccc > 2:1977867/1‑148 (MQ=255) tCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGcccccc > 2:1641717/1‑148 (MQ=255) cgcgGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCt < 2:640089/148‑1 (MQ=255) ggCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTAtt > 2:198095/1‑148 (MQ=255) gACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGacac < 1:692692/148‑1 (MQ=255) ccATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCt > 1:2393446/1‑148 (MQ=255) ccATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCt > 2:152347/1‑148 (MQ=255) cATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACATCCACCCTATTTCTGAAACCTa > 2:2426715/1‑148 (MQ=255) cATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTa > 2:1778178/1‑148 (MQ=255) aTTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTAc > 2:3317036/1‑148 (MQ=255) aTTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTAc > 1:1552417/1‑148 (MQ=255) gTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGAt < 1:2960643/148‑1 (MQ=255) gTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGAt < 1:1181870/148‑1 (MQ=255) tataCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATgg > 2:947387/1‑148 (MQ=255) tataCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATgg > 2:947504/1‑148 (MQ=255) ataCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGc > 2:555812/1‑148 (MQ=255) taCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCa < 2:2223957/148‑1 (MQ=255) taCAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACATACAGATGGCa > 2:1943231/1‑148 (MQ=255) aGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGa > 1:619146/1‑148 (MQ=255) tgtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAAt > 1:3183102/1‑148 (MQ=255) gtTATTGTCTTTGCGCTTATAATATGATAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATa > 2:1355035/1‑148 (MQ=255) gtTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATa < 2:343548/148‑1 (MQ=255) ttATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAg < 1:1164059/148‑1 (MQ=255) ttGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAgcgc > 2:2896314/1‑148 (MQ=255) ttGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCa > 1:2363286/1‑148 (MQ=255) tGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAg > 2:2933591/1‑148 (MQ=255) gcTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCg < 2:2619963/148‑1 (MQ=255) cTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGt > 1:931799/1‑148 (MQ=255) tataATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCt < 2:804055/148‑1 (MQ=255) tataATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCt > 2:2759567/1‑148 (MQ=255) ataataTCAAAACCAACAAAAAAATCAATCTTT‑ATGTTAAACAAATCAAAAAAATACCCCTTTAATGTTATAAAAATGAAAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCtt < 1:2997581/148‑1 (MQ=255) aataTGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACAAAAATACCCCTTTAATGTTATAAAAATTATAATCAAAAAACAGCCCCCCTATTTCTGTCACCTACAGATGGCAAGAAATAGCGCCTGGCTGGCGTCtttt > 2:1305090/1‑148 (MQ=255) tatGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTcc > 2:1074282/1‑148 (MQ=255) tGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCACCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCgg > 1:2441189/1‑148 (MQ=255) aCAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGcc < 1:1617945/148‑1 (MQ=255) aCAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGcc > 2:2894543/1‑148 (MQ=255) aCAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGcc < 1:2896039/148‑1 (MQ=255) ccATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTg > 1:1109724/1‑148 (MQ=255) ccATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTg < 2:1687938/148‑1 (MQ=255) ccATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTg > 2:2796781/1‑148 (MQ=255) ccATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAAGGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTg < 1:2758716/148‑1 (MQ=255) cATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGt < 1:2221248/148‑1 (MQ=255) tCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg < 1:2842290/148‑1 (MQ=255) tCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCg < 1:531759/148‑1 (MQ=255) cacaAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCgc < 2:1728127/148‑1 (MQ=255) caAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCgca > 1:1175869/1‑148 (MQ=255) caAAAATCAATCTTTAATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCgca > 1:3005225/1‑148 (MQ=255) aatcaatcTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACt > 1:2631805/1‑148 (MQ=255) aatcaatcTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACt < 2:859944/148‑1 (MQ=255) caatcTTT‑ATTTTATACAAATCACATAAATACCCCTTTAATTTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTa < 1:352293/148‑1 (MQ=255) aatcTTT‑ATGTGATACAAATCCCATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTaa < 1:1995370/148‑1 (MQ=255) tcTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAAcg > 1:596219/1‑148 (MQ=255) cTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAAcgc > 2:2502174/1‑148 (MQ=255) tt‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGt < 1:1977298/148‑1 (MQ=255) tt‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGt > 2:2046421/1‑148 (MQ=255) | GGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACCATCACAAAAATCAATCTTT‑ATGTGATACAAATCACATAAATACCCCTTTAATGTTATAAAAATGATAATCAAAAAACAGCCCCCCTATTTCTGACACCTACAGATGGCAAGAAATAGCGCCTGCCAGGCGTCTTTTCCGGCCATTGTCGCAGCACTGTAACGCGT > CP009273/1981376‑1981667 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |