| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,622,058 | C→A | 100% | D281Y (GAT→TAT) | rbbA ← | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,622,058 | 0 | C | A | 98.8% | 535.6 / ‑1.7 | 168 | D281Y (GAT→TAT) | rbbA | ribosome‑associated ATPase: ATP‑binding protein/ATP‑binding membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (1/1); new base A (73/93); total (74/94) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01 | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 169 total aligned reads displayed.
GCGGGCAGCAGTCCGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATCGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCGTTTGCTGCCGTAGCTCTTC > CP009273/3621916‑3622202 | gCGGGCAGCAGTCCGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATagcgcg > 1:834897/1‑148 (MQ=255) cGGGCAGCAGTCCGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAgcgcgc < 1:2905792/148‑1 (MQ=255) ggCAGCAGTCCGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCtt > 1:2746510/1‑148 (MQ=255) gcagcaGTCCGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTc > 2:2955142/1‑148 (MQ=255) cagcagTCCGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCg < 1:3530899/148‑1 (MQ=255) cagTCCGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATg > 1:1500022/1‑148 (MQ=255) agTCCGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATgg < 2:745368/148‑1 (MQ=255) cGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAAt < 1:2558485/148‑1 (MQ=255) cGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAAt > 2:2622434/1‑148 (MQ=255) tGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAAtctc < 1:685923/148‑1 (MQ=255) tGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAAtctc < 1:685857/148‑1 (MQ=255) aGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTg < 1:2186291/148‑1 (MQ=255) tCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTc < 1:573698/148‑1 (MQ=255) ggtggtggATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATTCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGt > 1:114529/1‑148 (MQ=255) ggtggtggATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGt < 2:2111167/148‑1 (MQ=255) ggtggtggATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGt > 1:114701/1‑148 (MQ=255) ggtggATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGa < 2:697070/148‑1 (MQ=255) tggATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATa < 2:3399635/148‑1 (MQ=255) tggATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATa < 2:2107470/148‑1 (MQ=255) aTTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACgg < 2:1414865/148‑1 (MQ=255) ttACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTg < 2:1460302/148‑1 (MQ=255) tACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTgg > 2:2167715/1‑148 (MQ=255) tACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTgg < 2:1736463/148‑1 (MQ=255) cGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGAt > 2:500980/1‑148 (MQ=255) cGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGAt > 2:3286600/1‑148 (MQ=255) aGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCAc < 1:2365999/148‑1 (MQ=255) gTTCGAACCAAGGAAACCAAAAATCTCCCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTAc < 1:365195/148‑1 (MQ=255) tCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGc > 2:1911922/1‑148 (MQ=255) cGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGcc < 1:2948804/148‑1 (MQ=255) aaCCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTg < 1:1085818/148‑1 (MQ=255) aCCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGa > 2:836082/1‑148 (MQ=255) aaaaCCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGcc < 2:458545/148‑1 (MQ=255) aaCCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTg > 2:365612/1‑148 (MQ=255) cAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCg > 2:988993/1‑148 (MQ=255) cAAAAATCT‑ACCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAATACGCATGGTCAGATAGCGCGCGTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCg < 2:2890074/148‑1 (MQ=255) aaaaaTCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGt < 1:900720/148‑1 (MQ=255) aaaaaTCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGt < 1:1795448/148‑1 (MQ=255) aaaaaTCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGt < 1:2495958/148‑1 (MQ=255) aTCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTgcg < 2:643708/148‑1 (MQ=255) tct‑cCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTgcgc < 1:686949/148‑1 (MQ=255) tct‑cCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTgcgc > 1:770329/1‑148 (MQ=255) tct‑cCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTgcgc < 1:470308/148‑1 (MQ=255) tct‑cCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTgcgc < 1:365612/148‑1 (MQ=255) ccccGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTg < 1:1029609/148‑1 (MQ=255) ccccGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTg < 1:2810810/148‑1 (MQ=255) ccccGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTg > 2:1535471/1‑148 (MQ=255) cgcgTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCgg < 2:2767548/148‑1 (MQ=255) gcgTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCCTGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATTCGCCTGGCGTTGCGCTTGCGGt < 2:2801680/148‑1 (MQ=255) cgTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTa > 1:2329318/1‑148 (MQ=255) aaTGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGa > 1:61111/1‑148 (MQ=255) aTGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGAt < 2:1517644/148‑1 (MQ=255) aTGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGAt < 1:1370755/148‑1 (MQ=255) tGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGAtt < 2:763657/148‑1 (MQ=255) tGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGAtt < 2:455963/148‑1 (MQ=255) gAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTtata < 2:1500022/148‑1 (MQ=255) aaaTTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATaa > 2:996256/1‑148 (MQ=255) aaaTTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATaa > 2:996275/1‑148 (MQ=255) aaaTTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATaa < 1:900252/148‑1 (MQ=255) aaaTTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATaa < 1:988993/148‑1 (MQ=255) aaaTTAACGGTATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCTGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACTGATTTATaa < 2:3182148/148‑1 (MQ=255) ttAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTCACAGATTTATAAATg > 2:2522902/1‑148 (MQ=255) ttAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATg < 1:3304370/148‑1 (MQ=255) ttAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATg < 1:2550712/148‑1 (MQ=255) tAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGc > 2:489202/1‑148 (MQ=255) tAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGc > 2:1299525/1‑148 (MQ=255) aaCGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGct < 2:834897/148‑1 (MQ=255) aaCGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCGTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGct < 1:1946627/148‑1 (MQ=255) aCGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGctt < 2:2550546/148‑1 (MQ=255) aCGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGctt > 2:1086697/1‑148 (MQ=255) cGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGcttc > 2:2337941/1‑148 (MQ=255) cGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGcttc > 2:123927/1‑148 (MQ=255) cGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGcttc > 2:1321030/1‑148 (MQ=255) cGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGcttc < 1:1008170/148‑1 (MQ=255) tGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGcttctt < 2:438626/148‑1 (MQ=255) gATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCttcttc > 2:3231717/1‑148 (MQ=255) gATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCttcttc < 1:1659964/148‑1 (MQ=255) gATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCttcttc > 2:928616/1‑148 (MQ=255) gATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCttcttc < 2:1014615/148‑1 (MQ=255) gATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCttcttc > 2:3231675/1‑148 (MQ=255) aaCGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGc > 1:712855/1‑148 (MQ=255) aaCGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGc < 2:1013891/148‑1 (MQ=255) cGGCAACTAAGGAACCAAAACGCATTGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCATGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGt > 1:896518/1‑148 (MQ=255) cGGCAACGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGt > 1:3379774/1‑148 (MQ=255) aaCGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAgcg > 2:1836408/1‑148 (MQ=255) aCGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAgcgc > 2:3006548/1‑148 (MQ=255) cGAAGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCt < 2:231677/148‑1 (MQ=255) aaGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCttt > 1:3025552/1‑148 (MQ=255) aaGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCttt > 1:3025875/1‑148 (MQ=255) aGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTg < 2:947935/148‑1 (MQ=255) aGGAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTg > 1:1601032/1‑148 (MQ=255) ggAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGc > 2:334618/1‑148 (MQ=255) ggAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGc > 2:1927604/1‑148 (MQ=255) gAACCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCg > 2:1911821/1‑148 (MQ=255) aCCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCGtt < 1:2622434/148‑1 (MQ=255) aCCAAAACGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCGtt < 2:2839715/148‑1 (MQ=255) aaaaCGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCGTTtgc < 1:2955142/148‑1 (MQ=255) aCGCATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCGTTtgctgc < 1:140800/148‑1 (MQ=255) cATGGTCAGATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCGTTTGCTGCCGt < 2:2931924/148‑1 (MQ=255) ggTCAGATCGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCGTTTGCTGCCGTAGc > 2:494282/1‑148 (MQ=255) gATAGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCGTTTGCTGCCGTAGCTCTTc > 1:621585/1‑148 (MQ=255) | GCGGGCAGCAGTCCGGTGAGCATTTTCATGGTGGTGGATTTACCGCAGCCGTTCGAACCAAGAAAACCAAAAATCT‑CCCCGCGTGGAATGCGGAAATTAACGTGATCAACGGCAACGAAGGAACCAAAACGCATGGTCAGATCGCGCGCTTCGATGGCAATCTCTGCGTTTTCAGGTTGATACGGTGGGATCACTACCGCCTGATGCGCCTGGCGTTGCGCTTGCGGTAACAGATTTATAAATGCTTCTTCCAGCGTAGCGCTTTGCGTTTGCTGCCGTAGCTCTTC > CP009273/3621916‑3622202 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |