| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,638,641 | C→A | 100% | intergenic (‑99/‑104) | prlC ← / → rlmJ | oligopeptidase A/23S rRNA m(6)A2030 methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,638,641 | 0 | C | A | 98.3% | 734.2 / 3.4 | 229 | intergenic (‑99/‑104) | prlC/rlmJ | oligopeptidase A/23S rRNA m(6)A2030 methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base C (3/1); new base A (137/88); total (140/89) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
Only 100 of 230 total aligned reads displayed.
TTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGC > CP009273/3638496‑3638785 | ttAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGt < 1:2967024/148‑1 (MQ=255) tAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGtt < 1:2047559/148‑1 (MQ=255) tAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGtt < 1:2652635/148‑1 (MQ=255) tAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGtt < 1:1422744/148‑1 (MQ=255) tAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGtt < 2:215132/148‑1 (MQ=255) gAAAACGGAGGCAATTCAAAGGGAGTCAGAAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAATTTAc > 1:878022/1‑148 (MQ=255) aaCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCt > 1:736162/1‑148 (MQ=255) aCGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCtt < 1:3205951/148‑1 (MQ=255) aGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTcgc > 1:1465591/1‑148 (MQ=255) cAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggc > 2:1981422/1‑148 (MQ=255) aaTTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcg < 2:2217097/148‑1 (MQ=255) aaTTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcg < 2:3445992/148‑1 (MQ=255) aTTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcgg > 2:1523946/1‑148 (MQ=255) aTTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcgg > 2:435354/1‑148 (MQ=255) ttCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcggc > 2:2850340/1‑148 (MQ=255) ttCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcggc > 2:111212/1‑148 (MQ=255) tCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCgcggcggcg > 1:1037299/1‑148 (MQ=255) aaaGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCggcggcggc < 1:3484076/148‑1 (MQ=255) aaGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGcc < 2:2936355/148‑1 (MQ=255) aGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCct < 1:2821488/148‑1 (MQ=255) aGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCACCATAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCct > 2:714290/1‑148 (MQ=255) gggAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCctc > 1:3361961/1‑148 (MQ=255) gTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCtttt < 1:423600/148‑1 (MQ=255) cAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCg > 1:1241922/1‑148 (MQ=255) gTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGt < 2:789761/148‑1 (MQ=255) aCGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGTCGCGTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGtata > 1:1271289/1‑148 (MQ=255) cGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATAc > 1:2720912/1‑148 (MQ=255) aTTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGt > 1:1892448/1‑148 (MQ=255) tCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTcc < 1:2097946/148‑1 (MQ=255) tCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTcc < 1:1449173/148‑1 (MQ=255) tCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGa < 1:1643581/148‑1 (MQ=255) cATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGAt > 1:3237446/1‑148 (MQ=255) cATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGAt > 1:1466176/1‑148 (MQ=255) ttCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATAc > 2:3310945/1‑148 (MQ=255) ttCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATAc > 2:1748133/1‑148 (MQ=255) tCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACg > 1:1926107/1‑148 (MQ=255) cAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCtttt > 1:220896/1‑148 (MQ=255) cAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCtttt > 2:986887/1‑148 (MQ=255) tCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTtgtg < 1:3156067/148‑1 (MQ=255) tCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTtgtg > 2:878376/1‑148 (MQ=255) tCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTtgtg > 2:47907/1‑148 (MQ=255) tCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTtgtg > 2:1283593/1‑148 (MQ=255) ccTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTgc > 1:3449035/1‑148 (MQ=255) tGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTgcgc > 2:1877038/1‑148 (MQ=255) tGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTgcgc > 2:3273326/1‑148 (MQ=255) ggTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGcc > 1:410002/1‑148 (MQ=255) tAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCg > 1:3296297/1‑148 (MQ=255) tAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCg > 1:2561193/1‑148 (MQ=255) aaGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGaa < 1:2765910/148‑1 (MQ=255) agagGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAAt > 2:1543010/1‑148 (MQ=255) agagGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAAt > 2:3038820/1‑148 (MQ=255) ttAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACggg < 1:1139830/148‑1 (MQ=255) ttAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACggg < 1:1719496/148‑1 (MQ=255) ttAAGGAAGCGCTCAACAGGAGCTTTACATAATGTGTGTAGAATGGGGTTAAGTGTAGTGAATTTCAAAGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACggg > 2:920206/1‑148 (MQ=255) tAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGc < 2:658984/148‑1 (MQ=255) ggAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGa > 2:3088159/1‑148 (MQ=255) gcgcTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAtttt > 1:3295263/1‑148 (MQ=255) cgcTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGAttttt > 1:2902637/1‑148 (MQ=255) gcTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTtta < 1:45434/148‑1 (MQ=255) gcTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTtta < 2:1241922/148‑1 (MQ=255) cTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttac > 1:3446959/1‑148 (MQ=255) cAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttactt > 2:476922/1‑148 (MQ=255) cAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttaatt > 1:1884060/1‑148 (MQ=255) cAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCATGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttactt < 1:3115193/148‑1 (MQ=255) aCAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttacttac > 1:3558074/1‑148 (MQ=255) aCAGGCGCTTAACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTttacttac > 2:3208457/1‑148 (MQ=255) ggCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGAGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCgg > 2:1095331/1‑148 (MQ=255) gcTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAac < 1:1231861/148‑1 (MQ=255) tttACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAacac > 1:3278099/1‑148 (MQ=255) ttACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACAcc > 1:2245954/1‑148 (MQ=255) ttACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACAcc < 1:1295915/148‑1 (MQ=255) aTAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTa > 2:1648691/1‑148 (MQ=255) aTAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTa > 2:1649770/1‑148 (MQ=255) aaTGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTAcc < 1:2994646/148‑1 (MQ=255) aTGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTAccc > 2:3485936/1‑148 (MQ=255) gtAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTc < 1:2628723/148‑1 (MQ=255) gtAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTc < 1:229999/148‑1 (MQ=255) gCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGt < 1:27836/148‑1 (MQ=255) aTGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTa < 2:1271289/148‑1 (MQ=255) aTGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTa < 2:1434001/148‑1 (MQ=255) tGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTAt > 2:2425739/1‑148 (MQ=255) tGGGGTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTAt > 1:2444078/1‑148 (MQ=255) gggTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGACCACCTTTACCCATGCTCAGTTATCg > 2:1886072/1‑148 (MQ=255) gTTAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGcc > 2:2664756/1‑148 (MQ=255) tAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCcac > 1:591650/1‑148 (MQ=255) tAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCcac < 1:2668979/148‑1 (MQ=255) tAAGTGTAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCcac < 2:1926107/148‑1 (MQ=255) aGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAg < 2:2191518/148‑1 (MQ=255) gtgtAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGc < 1:1539985/148‑1 (MQ=255) gtgtAGTGAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGc < 1:3310945/148‑1 (MQ=255) gAATTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACg < 1:2850340/148‑1 (MQ=255) aTTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCt < 1:2289647/148‑1 (MQ=255) aTTTCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCt > 2:1292916/1‑148 (MQ=255) tttCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTg > 2:3079341/1‑148 (MQ=255) ttCAATGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTgg > 2:2788970/1‑148 (MQ=255) aTGAGAAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAAc > 1:1499993/1‑148 (MQ=255) gagaAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCa > 1:3255772/1‑148 (MQ=255) gagaAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCa > 1:986959/1‑148 (MQ=255) gaAAAGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACg > 2:2573668/1‑148 (MQ=255) aaaaGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGc > 1:198896/1‑148 (MQ=255) | TTAGAAAACGGAGGCAATTCAAAGGGAGTCAGTAACGGATTCGTCATTCGCGCAGTCCTGGTTAAAGAGGTTAAGGAAGCGCTCAACAGGCGCTTTACATAATGTGTGTAGCATGGGGTTAAGTGTAGTGAATTTCAATGAGAAACGTTACGCTTTCGCGGCGGCGGCCTCTTTTCGGTATACTGTCCTGATACGCTTTTGTGCGCCCCGAATACGGGCCGATTTTTACTTACCGGAACACCTTTACCCATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGC > CP009273/3638496‑3638785 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |