| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,698,119 | C→A | 100% | M1M (ATG→ATT) † | dppC ← | dipeptide/heme transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,698,119 | 0 | C | A | 95.8% | 561.1 / 15.3 | 190 | M1M (ATG→ATT) † | dppC | dipeptide/heme transporter |
| Reads supporting (aligned to +/- strand): ref base C (6/2); new base A (91/91); total (97/93) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.79e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.13e-01 | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 190 total aligned reads displayed.
TGGCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTG > CP009273/3697974‑3698261 | tGGCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAat < 2:2900186/148‑1 (MQ=255) ggCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatg < 1:3279504/148‑1 (MQ=255) ggCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatg < 1:1247711/148‑1 (MQ=255) ggCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAatg < 2:481014/148‑1 (MQ=255) aGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTc > 1:789245/1‑148 (MQ=255) aGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTc > 1:1597127/1‑148 (MQ=255) aGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTc > 2:2446526/1‑148 (MQ=255) gATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTcc > 1:3049407/1‑148 (MQ=255) aTCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTccc < 2:2106908/148‑1 (MQ=255) tCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTcccc > 2:915593/1‑148 (MQ=255) tCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTcccc < 2:1495982/148‑1 (MQ=255) cgcgATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCt > 1:2913443/1‑148 (MQ=255) gcgATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCtt < 2:1438797/148‑1 (MQ=255) gcgATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCtt < 1:1072336/148‑1 (MQ=255) tGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTActt < 2:2859575/148‑1 (MQ=255) cAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTa < 2:1738519/148‑1 (MQ=255) gCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATg < 2:2525449/148‑1 (MQ=255) gATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGa < 1:467660/148‑1 (MQ=255) aTGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGaa > 2:3340610/1‑148 (MQ=255) acgacgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATAc < 2:3353181/148‑1 (MQ=255) cgacgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATAcg < 2:1810286/148‑1 (MQ=255) cgacgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATAcg < 1:268732/148‑1 (MQ=255) cgacgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATAcg < 1:2375969/148‑1 (MQ=255) cgacgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATAcg < 2:2339176/148‑1 (MQ=255) acgTAAACCAGCCCGAAGACCGCGACTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATAcgcg < 1:3014199/148‑1 (MQ=255) cgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCgg > 2:1935647/1‑148 (MQ=255) cgTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCgg < 1:2482488/148‑1 (MQ=255) aaaCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGtt > 2:3154100/1‑148 (MQ=255) aCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTca > 2:1951615/1‑148 (MQ=255) aCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTca > 2:1239324/1‑148 (MQ=255) aCCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTca > 1:265902/1‑148 (MQ=255) ccAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTcac > 1:2589841/1‑148 (MQ=255) cAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTcacc < 2:558504/148‑1 (MQ=255) cAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTcacc < 2:558611/148‑1 (MQ=255) cccGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACg < 1:487858/148‑1 (MQ=255) ccGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGc < 2:1131957/148‑1 (MQ=255) acgacCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGt > 1:3236103/1‑148 (MQ=255) cgacCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTa < 1:3469407/148‑1 (MQ=255) cTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATc > 2:1097001/1‑148 (MQ=255) tttGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCg > 2:1458381/1‑148 (MQ=255) ttgttgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGa > 1:228892/1‑148 (MQ=255) ttgttgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGa > 1:115778/1‑148 (MQ=255) tgttgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGAc > 1:2645772/1‑148 (MQ=255) tgtagCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGAc < 2:1665006/148‑1 (MQ=255) gttgCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGAcc < 2:2247844/148‑1 (MQ=255) gCGTTTAAAATAGTGACAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGc < 1:2281580/148‑1 (MQ=255) tAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGtt > 1:1670976/1‑148 (MQ=255) aTAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACg < 2:3049407/148‑1 (MQ=255) aGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAg > 1:2817788/1‑148 (MQ=255) gTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAgg > 2:1336080/1‑148 (MQ=255) gTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAgg > 2:1958242/1‑148 (MQ=255) tGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGa < 1:1935647/148‑1 (MQ=255) gCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGAt < 2:194761/148‑1 (MQ=255) gAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAatc < 1:774187/148‑1 (MQ=255) gAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAatc > 2:2336231/1‑148 (MQ=255) aaCTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGTGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAatca > 2:2396832/1‑148 (MQ=255) aaCTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAatca > 1:242654/1‑148 (MQ=255) aCTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAatcat < 1:3294127/148‑1 (MQ=255) cTCCTGTAACGGGGTCATCGGCACCGGTGCGCAAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACTAGGATAatcatc > 2:2720272/1‑148 (MQ=255) tCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcg < 2:612640/148‑1 (MQ=255) tGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCAtcgtcg < 1:2239323/148‑1 (MQ=255) gTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGc > 1:1444658/1‑148 (MQ=255) gTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTAATTTTCAGTAACAAGTGACATCATGTCCCCTAACTACTTATGACGAATACTCGTGATCACCACGCCGTACAGCAGATCGACCAGCAAGATGACGAGGATAATCAacgtcga > 1:415845/1‑147 (MQ=255) tAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGcc > 2:1859186/1‑148 (MQ=255) cGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGccacc > 1:2980295/1‑148 (MQ=255) gTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCa < 1:1458381/148‑1 (MQ=255) gTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCa < 2:154977/148‑1 (MQ=255) gTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCa < 2:3088712/148‑1 (MQ=255) tCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCaa > 1:1831702/1‑148 (MQ=255) tCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCaa > 2:3218414/1‑148 (MQ=255) cATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACATGTGAAATGATGTCCCCTTACTTCTTATGACGAAAACGCGGGTTCACAACGCCGTACAGCAGATCGACCAGCCAGTTGACGAGGATAATCATCGTCGCCACCAGCAAt > 2:758735/1‑148 (MQ=255) aTCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATa < 1:2029453/148‑1 (MQ=255) ggCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcgc > 2:2018699/1‑148 (MQ=255) gCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcgcc > 2:1055204/1‑148 (MQ=255) aCCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATAcgccgc < 2:2913443/148‑1 (MQ=255) ccGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACgccgcc < 2:1677708/148‑1 (MQ=255) tAATCACTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTAc < 2:840090/148‑1 (MQ=255) aCTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGAt > 2:371735/1‑148 (MQ=255) aCTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGAt < 2:1591425/148‑1 (MQ=255) aCTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGAt > 2:1529142/1‑148 (MQ=255) aCTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGAt < 2:2318023/148‑1 (MQ=255) cTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATTATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATa < 1:1066340/148‑1 (MQ=255) cTTTATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATa > 1:1056634/1‑148 (MQ=255) ttATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGt > 2:2216164/1‑148 (MQ=255) tATTTTCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCACATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTc > 2:29474/1‑148 (MQ=255) ttttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgc > 2:2998114/1‑148 (MQ=255) ttttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgc < 1:572520/148‑1 (MQ=255) tttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgcg > 2:2999556/1‑148 (MQ=255) tttCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTcgcg > 2:3382725/1‑148 (MQ=255) tCAGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCgcggc < 2:228892/148‑1 (MQ=255) aGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGt < 2:2466856/148‑1 (MQ=255) aGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGt > 2:1373713/1‑148 (MQ=255) aGTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGt < 2:2469587/148‑1 (MQ=255) gTAACCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGtt > 2:3217140/1‑148 (MQ=255) aCCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCa > 1:3539684/1‑148 (MQ=255) aCCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCa > 1:512165/1‑148 (MQ=255) aCCTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCa < 1:2449001/148‑1 (MQ=255) ccTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAg > 1:3169991/1‑148 (MQ=255) ccTGTGAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAg > 1:705033/1‑148 (MQ=255) tgtgAAATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTg > 2:1022882/1‑148 (MQ=255) | TGGCAAAGATCGCGATGAACAGCACGATGACGACGTAAACCAGCCCGACGACCGCGCCTTTGTTGCGTTTAAAATAGTGCCAGAACTCCTGTAACGGGGTCATCGGCACCGGTGCGCTAATCACTTTATTTTCAGTAACCTGTGACATGATGTCCCCTTACTTCTTATGACGAATACGCGGGTTCACCACGCCGTACAGCAGATCGACCAGCAAGTTGACGAGGATAATCATCGTCGCCACCAGCAATACGCCGCCCTGCACTACCGGATAGTCGCGGCGTTGCAGTG > CP009273/3697974‑3698261 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |