| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | CP009273 | 3,934,426 | G→T | 19.6% | Q88K (CAG→AAG) | yieP ← | putative transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009273 | 3,934,426 | 0 | G | T | 19.6% | 711.2 / 107.3 | 258 | Q88K (CAG→AAG) | yieP | putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (108/99); new base T (22/29); total (130/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.76e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 262 total aligned reads displayed.
ACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAATCTCACC > CP009273/3934279‑3934573 | aCGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTg < 2:946357/148‑1 (MQ=255) gTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGAt < 2:944702/148‑1 (MQ=255) aTTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCCCCAGGTACGCAATTCCTGATCa > 1:239864/1‑148 (MQ=255) aTTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCa > 1:3035878/1‑148 (MQ=255) aTTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCa > 1:1200264/1‑148 (MQ=255) tGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAg < 2:696358/148‑1 (MQ=255) gagaTGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGTCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGa < 1:2954732/148‑1 (MQ=255) gaTGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGaaa < 2:1191216/148‑1 (MQ=255) tGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAAt > 1:2033963/1‑148 (MQ=255) gcTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTcc < 1:425335/148‑1 (MQ=255) tttCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAg > 1:1278774/1‑148 (MQ=255) gTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGa > 1:2789914/1‑148 (MQ=255) ttCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGAt > 2:2642833/1‑148 (MQ=255) cgcgGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATtgt < 1:1830792/148‑1 (MQ=255) cgGTTCCAAGCGGTGGTGGCTGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAATGTGATCGATGTCCTGTTGAAAGTTCTCTTCTGTCATCCACCAGGTTAGCAATTCCTTATCTAGAAAATTCCAGTTCGATTGTgg < 2:2578711/148‑1 (MQ=255) gTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCa < 1:251287/148‑1 (MQ=255) gTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCa > 1:931829/1‑148 (MQ=255) gCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATg < 1:2906625/148‑1 (MQ=255) cAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGAc > 1:981890/1‑148 (MQ=255) aCCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGAccc > 1:1292826/1‑148 (MQ=255) ccGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCg < 2:284014/148‑1 (MQ=255) cGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGa < 2:3345389/148‑1 (MQ=255) gTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAg < 1:1209439/148‑1 (MQ=255) gTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAg < 1:1140181/148‑1 (MQ=255) ttGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGt > 1:1030343/1‑148 (MQ=255) ctgcCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTccc > 2:1382515/1‑148 (MQ=255) ccAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAAt < 2:1594959/148‑1 (MQ=255) cAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAAtt < 2:1364568/148‑1 (MQ=255) cAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAAtt < 2:714382/148‑1 (MQ=255) gTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATtcg < 2:941278/148‑1 (MQ=255) tAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATtcgc > 2:1144098/1‑148 (MQ=255) aggcaggcTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATtcgcg < 2:2524237/148‑1 (MQ=255) gcaggcTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATtcgcggt < 1:1880890/148‑1 (MQ=255) caggcTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATtcgcggtc > 2:2268522/1‑148 (MQ=255) caggcTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATtcgcggtc > 2:891327/1‑148 (MQ=255) ggcTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATtcgcggtcgc > 1:344250/1‑148 (MQ=255) gcTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATtcgcggtcgcg < 2:233321/148‑1 (MQ=255) cGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTaaa < 2:3382252/148‑1 (MQ=255) cTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAAcc < 1:3112359/148‑1 (MQ=255) cTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAAcc < 1:2591445/148‑1 (MQ=255) cagacagaTACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATc > 1:1523183/1‑148 (MQ=255) cagaTACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCtt < 2:311564/148‑1 (MQ=255) cagaTACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCtt < 2:2450851/148‑1 (MQ=255) aTACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTg > 1:1036187/1‑148 (MQ=255) tACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGc > 1:2917925/1‑148 (MQ=255) aCGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGcc < 2:3301964/148‑1 (MQ=255) gCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGt < 1:1533975/148‑1 (MQ=255) gCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGt < 2:3054228/148‑1 (MQ=255) aTAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTa > 1:2193695/1‑148 (MQ=255) aTAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTa > 1:2820143/1‑148 (MQ=255) aCCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACg > 1:836639/1‑148 (MQ=255) cAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGtt < 1:3474342/148‑1 (MQ=255) aGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTGAACGtgt > 2:2203995/1‑146 (MQ=255) gAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGtttt < 2:691905/148‑1 (MQ=255) aaaGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTg > 1:675890/1‑148 (MQ=255) aaaGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTg < 2:2011475/148‑1 (MQ=255) aaGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGa > 2:819133/1‑148 (MQ=255) aaGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGa < 2:1911128/148‑1 (MQ=255) aGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGCAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTCACGTTTTGag > 2:2472240/1‑147 (MQ=255) aGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGAc > 2:2716789/1‑148 (MQ=255) aGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGAc > 2:1387923/1‑148 (MQ=255) gTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGAcc > 2:3207017/1‑148 (MQ=255) tGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCg < 2:981162/148‑1 (MQ=255) gATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGc > 2:2749803/1‑148 (MQ=255) tCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCtt > 1:3229047/1‑148 (MQ=255) tCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCtt < 2:1196596/148‑1 (MQ=255) gATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTcg < 1:523237/148‑1 (MQ=255) tGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTcgcg < 2:1250699/148‑1 (MQ=255) gACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGt > 1:1404453/1‑148 (MQ=255) gatgaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGc < 1:2437608/148‑1 (MQ=255) gatgaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGc > 1:1649125/1‑148 (MQ=255) tgaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTg > 1:1532817/1‑148 (MQ=255) gaAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGt < 1:555180/148‑1 (MQ=255) aaaGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTa > 1:356328/1‑148 (MQ=255) ttCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGac > 1:2082456/1‑148 (MQ=255) ttCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGac > 2:2850140/1‑148 (MQ=255) ttCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCAAGTTCGATTGTGGCATGACACGAGTACCAATTCGCGGTCGCGGTAAAAACATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGac > 1:739529/1‑148 (MQ=255) ctctTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGactc > 1:84483/1‑148 (MQ=255) gTCATCCACCAGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCaa < 2:2082032/148‑1 (MQ=255) gTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCaa < 2:1438226/148‑1 (MQ=255) tCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCaaa < 2:532208/148‑1 (MQ=255) tCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTg > 1:2731570/1‑148 (MQ=255) tCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTg > 2:156669/1‑148 (MQ=255) ccaccaGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGc < 2:1814407/148‑1 (MQ=255) ccaccaGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGc < 2:1814543/148‑1 (MQ=255) caccaGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCt < 1:2269209/148‑1 (MQ=255) caccaGGTAAGCAAGTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCt < 2:2957001/148‑1 (MQ=255) accaGGTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTc > 1:3251790/1‑148 (MQ=255) ggTAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGccc > 1:3062268/1‑148 (MQ=255) tAAGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAg < 1:1859334/148‑1 (MQ=255) aaGCAATTCCTTATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGc > 2:1957619/1‑148 (MQ=255) aGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCt > 2:3123214/1‑148 (MQ=255) aTTCCTTATCAAGAAAATTCCAGGTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTGTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAAt < 2:1921969/148‑1 (MQ=255) aTTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAAt > 1:842753/1‑148 (MQ=255) ttCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGTCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAAtc > 1:142947/1‑148 (MQ=255) ttCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAAtc > 1:2329609/1‑148 (MQ=255) ttCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAAtc > 2:2604692/1‑148 (MQ=255) cTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAATCTCa < 2:1026361/148‑1 (MQ=255) cTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAATCTCa < 2:462611/148‑1 (MQ=255) tGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAATCTCAc > 2:3521010/1‑148 (MQ=255) | ACGTATTGAGATGCGCTTTCTGTTCCGCGGTGCCAACCGTTGCTGCCAGTAGGCAGGCTTGCGGCTCCAGACAGATACGCATAACCAGAAAGTGATCGATGACCTGATGAAAGTTCTCTTCTGTCATCCACCAGGTAAGCAATTCCTGATCAAGAAAATTCCAGTTCGATTGTGGCATGACCCGAGTACCAATTCGCGGTCGCGGTAAAACCATCCCTTTTGCCGTTAACGTTTTGACCGCTTCGCGTACCGCTGTACGACTCACTCCAAATTGCTCGCCCAGCTCAATCTCACC > CP009273/3934279‑3934573 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |